RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 SCLT1Q96NL6 688 aa12.56□□□□□ -0.4
LDLRAD4-204ENST00000435606 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
LDLRAD4-204ENST00000435606 KIF14Q15058 1648 aa12.56□□□□□ -0.4
LDLRAD4-204ENST00000435606 EHMT1Q9H9B1 1298 aa12.56□□□□□ -0.4
LDLRAD4-204ENST00000435606 NESP48681 1621 aa12.56□□□□□ -0.4
LDLRAD4-204ENST00000435606 RRS1Q15050 365 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 SEPT7Q16181 437 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 TRIM5Q9C035 493 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 ABCF2Q9UG63 623 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 NEFHP12036 1026 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 PDE3AQ14432 1141 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 FCHSD2O94868 740 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 IDH1O75874 414 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 CEP131Q9UPN4 1083 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 CCDC141Q6ZP82 1450 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 PPP1R12BO60237 982 aaPredicted RBP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 PPFIBP1Q86W92 1011 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
LDLRAD4-204ENST00000435606 EXOC5O00471 708 aa12.54□□□□□ -0.4
LDLRAD4-204ENST00000435606 ZNF771Q7L3S4 317 aaPredicted RBP12.54□□□□□ -0.4
LDLRAD4-204ENST00000435606 ZNF428Q96B54 188 aa12.54□□□□□ -0.4
LDLRAD4-204ENST00000435606 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
LDLRAD4-204ENST00000435606 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
LDLRAD4-204ENST00000435606 CUL5Q93034 780 aa12.54□□□□□ -0.4
LDLRAD4-204ENST00000435606 CEBPZQ03701 1054 aaKnown RBP12.54□□□□□ -0.4
LDLRAD4-204ENST00000435606 ME1P48163 572 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 PDIA4P13667 645 aaKnown RBP12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 SERPINC1P01008 464 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 BLOC1S2Q6QNY1 142 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 IBSPP21815 317 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 CEP57L1Q8IYX8 460 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 PTCD1O75127 700 aaKnown RBP12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 SLC5A1P13866 664 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 STK3Q13188 491 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 FMNL2Q96PY5 1086 aa12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 MPHOSPH6Q99547 160 aaKnown RBP12.53□□□□□ -0.4
LDLRAD4-204ENST00000435606 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.4
LDLRAD4-204ENST00000435606 TSR2Q969E8 191 aaKnown RBP12.52□□□□□ -0.4
LDLRAD4-204ENST00000435606 MPRIPQ6WCQ1 1025 aa12.52□□□□□ -0.41
LDLRAD4-204ENST00000435606 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
LDLRAD4-204ENST00000435606 NOM1Q5C9Z4 860 aaKnown RBP12.52□□□□□ -0.41
LDLRAD4-204ENST00000435606 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
LDLRAD4-204ENST00000435606 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.41
LDLRAD4-204ENST00000435606 CFAP45Q9UL16 551 aa12.52□□□□□ -0.41
LDLRAD4-204ENST00000435606 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
LDLRAD4-204ENST00000435606 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 SEPT11Q9NVA2 429 aaKnown RBP12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 A0A087WZG4 1122 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 CBFA2T2O43439 604 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 IFIT5Q13325 482 aaKnown RBP12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 NFE2L2Q16236 605 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 GOLGA6L10A6NI86 522 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 WDR78Q5VTH9 848 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 IQGAP2Q13576 1575 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 AKNAQ7Z591 1439 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC181Q5TID7 509 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC150Q8NCX0 1101 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 ZSCAN31Q96LW9 406 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 MAP3K12Q12852 859 aa12.51□□□□□ -0.41
LDLRAD4-204ENST00000435606 WDR33Q9C0J8 1336 aaKnown RBP12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 RAB11FIP3O75154 756 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 ST5P78524 1137 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 MYO1BO43795 1136 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 KRT85P78386 507 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 ZNF444Q8N0Y2 327 aaPredicted RBP12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 ADGRL1O94910 1474 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 CUL7Q14999 1698 aa12.5□□□□□ -0.41
LDLRAD4-204ENST00000435606 FIBPO43427 364 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC97Q96F63 343 aaPredicted RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 CETN2P41208 172 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 NASPP49321 788 aaPredicted RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 PDRG1Q9NUG6 133 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 LAMC3Q9Y6N6 1575 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms