RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 CCDC85CA6NKD9 419 aa12.29□□□□□ -0.44
NCSTN-206ENST00000435149 GCP02774 474 aa12.29□□□□□ -0.44
NCSTN-206ENST00000435149 CTCFP49711 727 aaPredicted RBP12.29□□□□□ -0.44
NCSTN-206ENST00000435149 COL23A1Q86Y22 540 aaPredicted RBP12.29□□□□□ -0.44
NCSTN-206ENST00000435149 PIK3C2GO75747 1445 aa12.28□□□□□ -0.44
NCSTN-206ENST00000435149 POGKQ9P215 609 aa12.28□□□□□ -0.44
NCSTN-206ENST00000435149 TRPM1Q7Z4N2 1603 aa12.28□□□□□ -0.44
NCSTN-206ENST00000435149 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
NCSTN-206ENST00000435149 RRAGCQ9HB90 399 aa12.27□□□□□ -0.45
NCSTN-206ENST00000435149 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.45
NCSTN-206ENST00000435149 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
NCSTN-206ENST00000435149 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.45
NCSTN-206ENST00000435149 ZBTB7CA1YPR0 619 aa12.26□□□□□ -0.45
NCSTN-206ENST00000435149 KCNQ4P56696 695 aa12.26□□□□□ -0.45
NCSTN-206ENST00000435149 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
NCSTN-206ENST00000435149 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
NCSTN-206ENST00000435149 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
NCSTN-206ENST00000435149 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
NCSTN-206ENST00000435149 LBX1P52954 281 aa12.24□□□□□ -0.45
NCSTN-206ENST00000435149 HAX1O00165 279 aa12.23□□□□□ -0.45
NCSTN-206ENST00000435149 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
NCSTN-206ENST00000435149 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
NCSTN-206ENST00000435149 C14orf93Q9H972 538 aaKnown RBP12.23□□□□□ -0.45
NCSTN-206ENST00000435149 PIK3C2AO00443 1686 aa12.22□□□□□ -0.45
NCSTN-206ENST00000435149 ABCC6O95255 1503 aa12.22□□□□□ -0.45
NCSTN-206ENST00000435149 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
NCSTN-206ENST00000435149 C9orf131Q5VYM1 1079 aa12.22□□□□□ -0.45
NCSTN-206ENST00000435149 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
NCSTN-206ENST00000435149 MKRN1Q9UHC7 482 aaKnown RBP12.22□□□□□ -0.45
NCSTN-206ENST00000435149 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
NCSTN-206ENST00000435149 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
NCSTN-206ENST00000435149 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
NCSTN-206ENST00000435149 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
NCSTN-206ENST00000435149 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
NCSTN-206ENST00000435149 POLR3AO14802 1390 aaPredicted RBP12.19□□□□□ -0.46
NCSTN-206ENST00000435149 TNRC18O15417 2968 aaPredicted RBP12.19□□□□□ -0.46
NCSTN-206ENST00000435149 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
NCSTN-206ENST00000435149 PPARGC1BQ86YN6 1023 aaKnown RBP12.19□□□□□ -0.46
NCSTN-206ENST00000435149 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
NCSTN-206ENST00000435149 BCS1LQ9Y276 419 aa12.19□□□□□ -0.46
NCSTN-206ENST00000435149 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
NCSTN-206ENST00000435149 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
NCSTN-206ENST00000435149 COL18A1P39060 1754 aa12.18□□□□□ -0.46
NCSTN-206ENST00000435149 ACEP12821 1306 aa12.18□□□□□ -0.46
NCSTN-206ENST00000435149 CSB-PGBD3P0DP91 1061 aa12.18□□□□□ -0.46
NCSTN-206ENST00000435149 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
NCSTN-206ENST00000435149 ITGAEP38570 1179 aa12.17□□□□□ -0.46
NCSTN-206ENST00000435149 CFAP70Q5T0N1 1121 aa12.17□□□□□ -0.46
NCSTN-206ENST00000435149 WBP1LQ9NX94 342 aa12.17□□□□□ -0.46
NCSTN-206ENST00000435149 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
NCSTN-206ENST00000435149 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
NCSTN-206ENST00000435149 HSPA8P11142 646 aaKnown RBP12.16□□□□□ -0.46
NCSTN-206ENST00000435149 FLAD1Q8NFF5 587 aa12.16□□□□□ -0.46
NCSTN-206ENST00000435149 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
NCSTN-206ENST00000435149 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
NCSTN-206ENST00000435149 LY75O60449 1722 aa12.15□□□□□ -0.46
NCSTN-206ENST00000435149 SPATA31E1Q6ZUB1 1445 aa12.15□□□□□ -0.46
NCSTN-206ENST00000435149 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
NCSTN-206ENST00000435149 PRPF38BQ5VTL8 546 aaKnown RBP12.14□□□□□ -0.47
NCSTN-206ENST00000435149 SLIT3O75094 1523 aa12.13□□□□□ -0.47
NCSTN-206ENST00000435149 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
NCSTN-206ENST00000435149 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
NCSTN-206ENST00000435149 TRAK1Q9UPV9 953 aa12.13□□□□□ -0.47
NCSTN-206ENST00000435149 CPSF1Q10570 1443 aaKnown RBP12.12□□□□□ -0.47
NCSTN-206ENST00000435149 TGFB2P61812 414 aa12.12□□□□□ -0.47
NCSTN-206ENST00000435149 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
NCSTN-206ENST00000435149 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
NCSTN-206ENST00000435149 QRICH2Q9H0J4 1663 aa12.11□□□□□ -0.47
NCSTN-206ENST00000435149 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
NCSTN-206ENST00000435149 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
NCSTN-206ENST00000435149 FCHSD2O94868 740 aa12.11□□□□□ -0.47
NCSTN-206ENST00000435149 IL2RBP14784 551 aa12.11□□□□□ -0.47
NCSTN-206ENST00000435149 SYTL4Q96C24 671 aaPredicted RBP12.11□□□□□ -0.47
NCSTN-206ENST00000435149 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
NCSTN-206ENST00000435149 VEGFBP49765 207 aa12.1□□□□□ -0.47
NCSTN-206ENST00000435149 NLRP6P59044 892 aa12.1□□□□□ -0.47
NCSTN-206ENST00000435149 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
NCSTN-206ENST00000435149 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
NCSTN-206ENST00000435149 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
NCSTN-206ENST00000435149 ARHGEF25Q86VW2 580 aa12.09□□□□□ -0.47
NCSTN-206ENST00000435149 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
NCSTN-206ENST00000435149 RGPD5Q99666 1765 aa12.09□□□□□ -0.47
NCSTN-206ENST00000435149 ERBB3P21860 1342 aa12.09□□□□□ -0.47
NCSTN-206ENST00000435149 NSD2O96028 1365 aa12.08□□□□□ -0.48
NCSTN-206ENST00000435149 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
NCSTN-206ENST00000435149 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
NCSTN-206ENST00000435149 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
NCSTN-206ENST00000435149 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
NCSTN-206ENST00000435149 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
NCSTN-206ENST00000435149 ADGRB1O14514 1584 aa12.06□□□□□ -0.48
NCSTN-206ENST00000435149 GLTPD2A6NH11 291 aa12.06□□□□□ -0.48
NCSTN-206ENST00000435149 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
NCSTN-206ENST00000435149 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
NCSTN-206ENST00000435149 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
NCSTN-206ENST00000435149 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
NCSTN-206ENST00000435149 C5P01031 1676 aa12.06□□□□□ -0.48
NCSTN-206ENST00000435149 DPEP1P16444 411 aa12.05□□□□□ -0.48
NCSTN-206ENST00000435149 MAP2K1Q02750 393 aaPredicted RBP12.05□□□□□ -0.48
NCSTN-206ENST00000435149 AMIGO3Q86WK7 504 aa12.05□□□□□ -0.48
NCSTN-206ENST00000435149 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms