RNA–Protein interactions for RNA: ENST00000435044.1

LINC00385-201, long intergenic non-protein coding RNA 385, humanhuman

TSL 3 BASIC

Gene LINC00385, Length 374 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00385-201ENST00000435044 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
LINC00385-201ENST00000435044 COL18A1P39060 1754 aa11.49□□□□□ -0.57
LINC00385-201ENST00000435044 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
LINC00385-201ENST00000435044 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
LINC00385-201ENST00000435044 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
LINC00385-201ENST00000435044 SOS1Q07889 1333 aaPredicted RBP11.48□□□□□ -0.57
LINC00385-201ENST00000435044 WDR17Q8IZU2 1322 aa11.48□□□□□ -0.57
LINC00385-201ENST00000435044 CAMTA1Q9Y6Y1 1673 aa11.48□□□□□ -0.57
LINC00385-201ENST00000435044 RGPD5Q99666 1765 aa11.47□□□□□ -0.57
LINC00385-201ENST00000435044 HSP90AB1P08238 724 aaKnown RBP11.47□□□□□ -0.57
LINC00385-201ENST00000435044 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
LINC00385-201ENST00000435044 PIP4K2BP78356 416 aa11.47□□□□□ -0.57
LINC00385-201ENST00000435044 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
LINC00385-201ENST00000435044 CERKQ8TCT0 537 aa11.47□□□□□ -0.57
LINC00385-201ENST00000435044 IPO8O15397 1037 aaKnown RBP11.46□□□□□ -0.57
LINC00385-201ENST00000435044 AAMPQ13685 434 aa11.46□□□□□ -0.57
LINC00385-201ENST00000435044 CHRNA2Q15822 529 aa11.46□□□□□ -0.57
LINC00385-201ENST00000435044 TOM1L2Q6ZVM7 507 aa11.46□□□□□ -0.57
LINC00385-201ENST00000435044 CARD10Q9BWT7 1032 aa11.46□□□□□ -0.57
LINC00385-201ENST00000435044 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
LINC00385-201ENST00000435044 ABCA3Q99758 1704 aa11.46□□□□□ -0.58
LINC00385-201ENST00000435044 OVOS2A0A0G2JMS6 1433 aa11.45□□□□□ -0.58
LINC00385-201ENST00000435044 CHL1O00533 1208 aa11.45□□□□□ -0.58
LINC00385-201ENST00000435044 EXOSC9Q06265 439 aaKnown RBP11.45□□□□□ -0.58
LINC00385-201ENST00000435044 PDE3AQ14432 1141 aa11.45□□□□□ -0.58
LINC00385-201ENST00000435044 TAF7Q15545 349 aaPredicted RBP11.45□□□□□ -0.58
LINC00385-201ENST00000435044 ZNF530Q6P9A1 599 aaPredicted RBP11.45□□□□□ -0.58
LINC00385-201ENST00000435044 USHBP1Q8N6Y0 703 aa11.45□□□□□ -0.58
LINC00385-201ENST00000435044 TSR2Q969E8 191 aaKnown RBP11.45□□□□□ -0.58
LINC00385-201ENST00000435044 COL14A1Q05707 1796 aaKnown RBP11.45□□□□□ -0.58
LINC00385-201ENST00000435044 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
LINC00385-201ENST00000435044 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
LINC00385-201ENST00000435044 KIF16BQ96L93 1317 aa11.44□□□□□ -0.58
LINC00385-201ENST00000435044 RARSP54136 660 aaKnown RBP11.44□□□□□ -0.58
LINC00385-201ENST00000435044 TEFQ10587 303 aa11.44□□□□□ -0.58
LINC00385-201ENST00000435044 MCM10Q7L590 875 aa11.44□□□□□ -0.58
LINC00385-201ENST00000435044 IFNL2Q8IZJ0 200 aa11.44□□□□□ -0.58
LINC00385-201ENST00000435044 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
LINC00385-201ENST00000435044 TSPYL4Q9UJ04 414 aa11.44□□□□□ -0.58
LINC00385-201ENST00000435044 COL5A2P05997 1499 aaPredicted RBP11.44□□□□□ -0.58
LINC00385-201ENST00000435044 COL16A1Q07092 1604 aaPredicted RBP11.43□□□□□ -0.58
LINC00385-201ENST00000435044 FAM83GA6ND36 823 aa11.43□□□□□ -0.58
LINC00385-201ENST00000435044 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
LINC00385-201ENST00000435044 JCADQ9P266 1359 aa11.42□□□□□ -0.58
LINC00385-201ENST00000435044 IL2RBP14784 551 aa11.42□□□□□ -0.58
LINC00385-201ENST00000435044 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
LINC00385-201ENST00000435044 DCTN1Q14203 1278 aa11.42□□□□□ -0.58
LINC00385-201ENST00000435044 TWISTNBQ3B726 338 aaPredicted RBP11.42□□□□□ -0.58
LINC00385-201ENST00000435044 THUMPD2Q9BTF0 503 aaKnown RBP11.42□□□□□ -0.58
LINC00385-201ENST00000435044 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
LINC00385-201ENST00000435044 SMC4Q9NTJ3 1288 aa11.42□□□□□ -0.58
LINC00385-201ENST00000435044 BTG4Q9NY30 223 aa11.42□□□□□ -0.58
LINC00385-201ENST00000435044 CRB1P82279 1406 aa11.42□□□□□ -0.58
LINC00385-201ENST00000435044 PARP4Q9UKK3 1724 aaKnown RBP11.41□□□□□ -0.58
LINC00385-201ENST00000435044 ZKSCAN2Q63HK3 967 aa11.41□□□□□ -0.58
LINC00385-201ENST00000435044 STRN4Q9NRL3 753 aa11.41□□□□□ -0.58
LINC00385-201ENST00000435044 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
LINC00385-201ENST00000435044 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
LINC00385-201ENST00000435044 SPATA31A6Q5VVP1 1343 aa11.4□□□□□ -0.58
LINC00385-201ENST00000435044 PCDH11XQ9BZA7 1347 aa11.4□□□□□ -0.58
LINC00385-201ENST00000435044 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.58
LINC00385-201ENST00000435044 IL17REQ8NFR9 667 aa11.4□□□□□ -0.58
LINC00385-201ENST00000435044 ARHGAP45Q92619 1136 aa11.4□□□□□ -0.58
LINC00385-201ENST00000435044 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
LINC00385-201ENST00000435044 RNMTO43148 476 aaKnown RBP11.39□□□□□ -0.59
LINC00385-201ENST00000435044 VAMP4O75379 141 aa11.39□□□□□ -0.59
LINC00385-201ENST00000435044 BCAR3O75815 825 aa11.39□□□□□ -0.59
LINC00385-201ENST00000435044 HOXB7P09629 217 aa11.39□□□□□ -0.59
LINC00385-201ENST00000435044 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
LINC00385-201ENST00000435044 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
LINC00385-201ENST00000435044 ZCRB1Q8TBF4 217 aaKnown RBP11.39□□□□□ -0.59
LINC00385-201ENST00000435044 FRAT1Q92837 279 aaPredicted RBP11.39□□□□□ -0.59
LINC00385-201ENST00000435044 CCDC136Q96JN2 1154 aa11.39□□□□□ -0.59
LINC00385-201ENST00000435044 LRRC37A3O60309 1634 aa11.38□□□□□ -0.59
LINC00385-201ENST00000435044 BTBD11A6QL63 1104 aa11.38□□□□□ -0.59
LINC00385-201ENST00000435044 PHKG2P15735 406 aa11.38□□□□□ -0.59
LINC00385-201ENST00000435044 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
LINC00385-201ENST00000435044 PLIN1O60240 522 aa11.37□□□□□ -0.59
LINC00385-201ENST00000435044 CCDC30Q5VVM6 783 aa11.37□□□□□ -0.59
LINC00385-201ENST00000435044 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
LINC00385-201ENST00000435044 SSH1Q8WYL5 1049 aa11.37□□□□□ -0.59
LINC00385-201ENST00000435044 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
LINC00385-201ENST00000435044 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
LINC00385-201ENST00000435044 PKD1L3Q7Z443 1732 aa11.37□□□□□ -0.59
LINC00385-201ENST00000435044 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
LINC00385-201ENST00000435044 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
LINC00385-201ENST00000435044 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
LINC00385-201ENST00000435044 MPRIPQ6WCQ1 1025 aa11.36□□□□□ -0.59
LINC00385-201ENST00000435044 DZIP1LQ8IYY4 767 aaKnown RBP11.36□□□□□ -0.59
LINC00385-201ENST00000435044 PTPRCP08575 1304 aa11.35□□□□□ -0.59
LINC00385-201ENST00000435044 MEGF6O75095 1541 aa11.35□□□□□ -0.59
LINC00385-201ENST00000435044 NUTM2BA6NNL0 878 aaPredicted RBP11.35□□□□□ -0.59
LINC00385-201ENST00000435044 NUTM2EB1AL46 878 aaPredicted RBP11.35□□□□□ -0.59
LINC00385-201ENST00000435044 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
LINC00385-201ENST00000435044 EXOC5O00471 708 aa11.35□□□□□ -0.59
LINC00385-201ENST00000435044 NUTM2AQ8IVF1 878 aaPredicted RBP11.35□□□□□ -0.59
LINC00385-201ENST00000435044 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
LINC00385-201ENST00000435044 SLC52A2Q9HAB3 445 aa11.35□□□□□ -0.59
LINC00385-201ENST00000435044 LGR6Q9HBX8 967 aa11.35□□□□□ -0.59
LINC00385-201ENST00000435044 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms