RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ABCC6O95255 1503 aa14.98□□□□□ -0.01
LINC00539-203ENST00000434601 CSB-PGBD3P0DP91 1061 aa14.98□□□□□ -0.01
LINC00539-203ENST00000434601 CARD10Q9BWT7 1032 aa14.98□□□□□ -0.01
LINC00539-203ENST00000434601 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
LINC00539-203ENST00000434601 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
LINC00539-203ENST00000434601 BCL9O00512 1426 aa14.98□□□□□ -0.01
LINC00539-203ENST00000434601 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
LINC00539-203ENST00000434601 PPP1R1BQ9UD71 204 aaPredicted RBP14.97□□□□□ -0.01
LINC00539-203ENST00000434601 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
LINC00539-203ENST00000434601 KIF24Q5T7B8 1368 aa14.97□□□□□ -0.01
LINC00539-203ENST00000434601 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
LINC00539-203ENST00000434601 EXOC5O00471 708 aa14.96□□□□□ -0.01
LINC00539-203ENST00000434601 SOX12O15370 315 aa14.96□□□□□ -0.01
LINC00539-203ENST00000434601 KCNQ2O43526 872 aa14.96□□□□□ -0.01
LINC00539-203ENST00000434601 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
LINC00539-203ENST00000434601 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
LINC00539-203ENST00000434601 FLT4P35916 1363 aa14.96□□□□□ -0.02
LINC00539-203ENST00000434601 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
LINC00539-203ENST00000434601 RTL1A6NKG5 1358 aa14.95□□□□□ -0.02
LINC00539-203ENST00000434601 MARCH10Q8NA82 808 aaPredicted RBP14.94□□□□□ -0.02
LINC00539-203ENST00000434601 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
LINC00539-203ENST00000434601 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
LINC00539-203ENST00000434601 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00539-203ENST00000434601 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
LINC00539-203ENST00000434601 IL13P35225 146 aa14.91□□□□□ -0.02
LINC00539-203ENST00000434601 AMPHP49418 695 aa14.91□□□□□ -0.02
LINC00539-203ENST00000434601 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
LINC00539-203ENST00000434601 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
LINC00539-203ENST00000434601 EIF4A2Q14240 407 aaKnown RBP14.89□□□□□ -0.03
LINC00539-203ENST00000434601 HSP90AB2PQ58FF8 381 aa14.89□□□□□ -0.03
LINC00539-203ENST00000434601 STK32BQ9NY57 414 aa14.89□□□□□ -0.03
LINC00539-203ENST00000434601 TNS2Q63HR2 1409 aa14.89□□□□□ -0.03
LINC00539-203ENST00000434601 ERBB3P21860 1342 aa14.89□□□□□ -0.03
LINC00539-203ENST00000434601 SENP3-EIF4A1A0A087X0R7 540 aa14.88□□□□□ -0.03
LINC00539-203ENST00000434601 HOXC9P31274 260 aa14.88□□□□□ -0.03
LINC00539-203ENST00000434601 TXNRD1Q16881 649 aa14.88□□□□□ -0.03
LINC00539-203ENST00000434601 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
LINC00539-203ENST00000434601 PROM2Q8N271 834 aa14.88□□□□□ -0.03
LINC00539-203ENST00000434601 ANO8Q9HCE9 1232 aaPredicted RBP14.88□□□□□ -0.03
LINC00539-203ENST00000434601 NLRP2Q9NX02 1062 aa14.88□□□□□ -0.03
LINC00539-203ENST00000434601 NHSQ6T4R5 1651 aa14.87□□□□□ -0.03
LINC00539-203ENST00000434601 IL2RBP14784 551 aa14.87□□□□□ -0.03
LINC00539-203ENST00000434601 YY1P25490 414 aa14.87□□□□□ -0.03
LINC00539-203ENST00000434601 PNNQ9H307 717 aaKnown RBP14.87□□□□□ -0.03
LINC00539-203ENST00000434601 APAF1O14727 1248 aa14.86□□□□□ -0.03
LINC00539-203ENST00000434601 NGEFQ8N5V2 710 aa14.86□□□□□ -0.03
LINC00539-203ENST00000434601 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
LINC00539-203ENST00000434601 FAM208AQ9UK61 1670 aaKnown RBP14.85□□□□□ -0.03
LINC00539-203ENST00000434601 FCHSD2O94868 740 aa14.85□□□□□ -0.03
LINC00539-203ENST00000434601 SLC15A2Q16348 729 aa14.85□□□□□ -0.03
LINC00539-203ENST00000434601 ANKRD24Q8TF21 1146 aa14.85□□□□□ -0.03
LINC00539-203ENST00000434601 IP6K1Q92551 441 aa14.85□□□□□ -0.03
LINC00539-203ENST00000434601 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
LINC00539-203ENST00000434601 SALL2Q9Y467 1007 aaPredicted RBP14.85□□□□□ -0.03
LINC00539-203ENST00000434601 MAPK8IP3Q9UPT6 1336 aa14.85□□□□□ -0.03
LINC00539-203ENST00000434601 BTAF1O14981 1849 aa14.83□□□□□ -0.04
LINC00539-203ENST00000434601 HMOX1P09601 288 aa14.83□□□□□ -0.04
LINC00539-203ENST00000434601 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
LINC00539-203ENST00000434601 ZNF521Q96K83 1311 aa14.83□□□□□ -0.04
LINC00539-203ENST00000434601 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
LINC00539-203ENST00000434601 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
LINC00539-203ENST00000434601 IGSF1Q8N6C5 1336 aa14.82□□□□□ -0.04
LINC00539-203ENST00000434601 KDRP35968 1356 aa14.82□□□□□ -0.04
LINC00539-203ENST00000434601 NEFMP07197 916 aa14.81□□□□□ -0.04
LINC00539-203ENST00000434601 ACSBG1Q96GR2 724 aa14.81□□□□□ -0.04
LINC00539-203ENST00000434601 PDGFDQ9GZP0 370 aaPredicted RBP14.81□□□□□ -0.04
LINC00539-203ENST00000434601 MTFR1LQ9H019 292 aa14.81□□□□□ -0.04
LINC00539-203ENST00000434601 RGPD2P0DJD1 1756 aa14.8□□□□□ -0.04
LINC00539-203ENST00000434601 SULT6B1Q6IMI4 303 aa14.8□□□□□ -0.04
LINC00539-203ENST00000434601 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
LINC00539-203ENST00000434601 CHD4Q14839 1912 aa14.8□□□□□ -0.04
LINC00539-203ENST00000434601 PTGER2P43116 358 aa14.79□□□□□ -0.04
LINC00539-203ENST00000434601 CCDC27Q2M243 656 aa14.79□□□□□ -0.04
LINC00539-203ENST00000434601 AEBP1Q8IUX7 1158 aa14.79□□□□□ -0.04
LINC00539-203ENST00000434601 LTV1Q96GA3 475 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-203ENST00000434601 EYA1Q99502 592 aa14.79□□□□□ -0.04
LINC00539-203ENST00000434601 RRP7AQ9Y3A4 280 aaKnown RBP14.79□□□□□ -0.04
LINC00539-203ENST00000434601 NCAPD2Q15021 1401 aa14.78□□□□□ -0.04
LINC00539-203ENST00000434601 TMPOP42166 694 aaKnown RBP14.78□□□□□ -0.04
LINC00539-203ENST00000434601 DLG5Q8TDM6 1919 aa14.77□□□□□ -0.04
LINC00539-203ENST00000434601 NEUROD2Q15784 382 aa14.77□□□□□ -0.05
LINC00539-203ENST00000434601 QSER1Q2KHR3 1735 aa14.77□□□□□ -0.05
LINC00539-203ENST00000434601 PAPPAQ13219 1627 aa14.77□□□□□ -0.05
LINC00539-203ENST00000434601 GOLGA2Q08379 1002 aa14.76□□□□□ -0.05
LINC00539-203ENST00000434601 NFE2L2Q16236 605 aa14.76□□□□□ -0.05
LINC00539-203ENST00000434601 SLC27A3Q5K4L6 730 aa14.76□□□□□ -0.05
LINC00539-203ENST00000434601 WWC1Q8IX03 1113 aa14.76□□□□□ -0.05
LINC00539-203ENST00000434601 SYT17Q9BSW7 474 aa14.76□□□□□ -0.05
LINC00539-203ENST00000434601 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
LINC00539-203ENST00000434601 SLC16A10Q8TF71 515 aa14.75□□□□□ -0.05
LINC00539-203ENST00000434601 CDCA7LQ96GN5 454 aa14.75□□□□□ -0.05
LINC00539-203ENST00000434601 PHACTR3Q96KR7 559 aa14.75□□□□□ -0.05
LINC00539-203ENST00000434601 ARXQ96QS3 562 aa14.75□□□□□ -0.05
LINC00539-203ENST00000434601 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
LINC00539-203ENST00000434601 RIPK4P57078 832 aa14.74□□□□□ -0.05
LINC00539-203ENST00000434601 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
LINC00539-203ENST00000434601 WDR63Q8IWG1 891 aa14.73□□□□□ -0.05
LINC00539-203ENST00000434601 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
LINC00539-203ENST00000434601 E9PSI1 815 aa14.72□□□□□ -0.05
LINC00539-203ENST00000434601 HMGB2P26583 209 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms