RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 NUDCQ9Y266 331 aa28.72■■■□□ 2.19
TOP3B-205ENST00000434517 OVOS2A0A0G2JMS6 1433 aa28.71■■■□□ 2.19
TOP3B-205ENST00000434517 SULT6B1Q6IMI4 303 aa28.71■■■□□ 2.19
TOP3B-205ENST00000434517 AEBP1Q8IUX7 1158 aa28.69■■■□□ 2.18
TOP3B-205ENST00000434517 FAM182BQ5T319 152 aa28.68■■■□□ 2.18
TOP3B-205ENST00000434517 HMOX1P09601 288 aa28.67■■■□□ 2.18
TOP3B-205ENST00000434517 ZCRB1Q8TBF4 217 aaKnown RBP28.67■■■□□ 2.18
TOP3B-205ENST00000434517 PKD1L3Q7Z443 1732 aa28.66■■■□□ 2.18
TOP3B-205ENST00000434517 KDRP35968 1356 aa28.65■■■□□ 2.18
TOP3B-205ENST00000434517 SHANK3Q9BYB0 1731 aa28.65■■■□□ 2.18
TOP3B-205ENST00000434517 DDX54Q8TDD1 881 aaKnown RBP28.64■■■□□ 2.18
TOP3B-205ENST00000434517 LRP5O75197 1615 aa28.63■■■□□ 2.17
TOP3B-205ENST00000434517 U2AF1L5P0DN76 240 aaPredicted RBP28.63■■■□□ 2.17
TOP3B-205ENST00000434517 U2AF1Q01081 240 aaKnown RBP eCLIP28.63■■■□□ 2.17
TOP3B-205ENST00000434517 MARCH10Q8NA82 808 aaPredicted RBP28.63■■■□□ 2.17
TOP3B-205ENST00000434517 SPG7Q9UQ90 795 aa28.62■■■□□ 2.17
TOP3B-205ENST00000434517 FAM196AQ6ZSG2 479 aa28.61■■■□□ 2.17
TOP3B-205ENST00000434517 PCDH11XQ9BZA7 1347 aa28.6■■■□□ 2.17
TOP3B-205ENST00000434517 PCDH11YQ9BZA8 1340 aa28.6■■■□□ 2.17
TOP3B-205ENST00000434517 PLEKHG2Q9H7P9 1386 aa28.6■■■□□ 2.17
TOP3B-205ENST00000434517 PLEKHO1Q53GL0 409 aaPredicted RBP28.58■■■□□ 2.17
TOP3B-205ENST00000434517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.58■■■□□ 2.176e-7■■□□□ 11.4
TOP3B-205ENST00000434517 SF3B2Q13435 895 aaKnown RBP28.56■■■□□ 2.16
TOP3B-205ENST00000434517 AMOTQ4VCS5 1084 aa28.56■■■□□ 2.16
TOP3B-205ENST00000434517 DIEXFQ68CQ4 756 aaKnown RBP28.56■■■□□ 2.16
TOP3B-205ENST00000434517 DEFB132Q7Z7B7 95 aa28.56■■■□□ 2.16
TOP3B-205ENST00000434517 WDR43Q15061 677 aaKnown RBP eCLIP28.54■■■□□ 2.16
TOP3B-205ENST00000434517 RSPH6AQ9H0K4 717 aa28.54■■■□□ 2.16
TOP3B-205ENST00000434517 SBF2Q86WG5 1849 aa28.54■■■□□ 2.16
TOP3B-205ENST00000434517 PRKAR2BP31323 418 aa28.53■■■□□ 2.16
TOP3B-205ENST00000434517 KAT6BQ8WYB5 2073 aa28.53■■■□□ 2.16
TOP3B-205ENST00000434517 CYP27B1O15528 508 aa28.52■■■□□ 2.16
TOP3B-205ENST00000434517 FCHSD2O94868 740 aa28.52■■■□□ 2.16
TOP3B-205ENST00000434517 ZNF530Q6P9A1 599 aaPredicted RBP28.52■■■□□ 2.16
TOP3B-205ENST00000434517 IFNL2Q8IZJ0 200 aa28.51■■■□□ 2.15
TOP3B-205ENST00000434517 BCL9O00512 1426 aa28.51■■■□□ 2.15
TOP3B-205ENST00000434517 MRS2Q9HD23 443 aa28.5■■■□□ 2.15
TOP3B-205ENST00000434517 DOT1LQ8TEK3 1739 aa28.49■■■□□ 2.15
TOP3B-205ENST00000434517 TRIM37O94972 964 aa28.49■■■□□ 2.15
TOP3B-205ENST00000434517 PHKG2P15735 406 aa28.49■■■□□ 2.15
TOP3B-205ENST00000434517 CCDC184Q52MB2 194 aa28.49■■■□□ 2.15
TOP3B-205ENST00000434517 C1orf141Q5JVX7 400 aa28.49■■■□□ 2.15
TOP3B-205ENST00000434517 NEFMP07197 916 aa28.48■■■□□ 2.15
TOP3B-205ENST00000434517 ACSBG1Q96GR2 724 aa28.48■■■□□ 2.15
TOP3B-205ENST00000434517 PNNQ9H307 717 aaKnown RBP28.48■■■□□ 2.15
TOP3B-205ENST00000434517 NHSQ6T4R5 1651 aa28.46■■■□□ 2.15
TOP3B-205ENST00000434517 MTHFSDQ2M296 383 aaKnown RBP28.46■■■□□ 2.15
TOP3B-205ENST00000434517 TNS1Q9HBL0 1735 aaKnown RBP28.46■■■□□ 2.15
TOP3B-205ENST00000434517 HSP90AB1P08238 724 aaKnown RBP28.44■■■□□ 2.14
TOP3B-205ENST00000434517 GAS2L2Q8NHY3 880 aa28.44■■■□□ 2.14
TOP3B-205ENST00000434517 PHACTR3Q96KR7 559 aa28.44■■■□□ 2.14
TOP3B-205ENST00000434517 NKX1-1Q15270 411 aaPredicted RBP28.43■■■□□ 2.14
TOP3B-205ENST00000434517 SYTL4Q96C24 671 aaPredicted RBP28.43■■■□□ 2.14
TOP3B-205ENST00000434517 MAPK8IP3Q9UPT6 1336 aa28.43■■■□□ 2.14
TOP3B-205ENST00000434517 AKAP4Q5JQC9 854 aa28.42■■■□□ 2.14
TOP3B-205ENST00000434517 ADAMTS8Q9UP79 889 aa28.42■■■□□ 2.14
TOP3B-205ENST00000434517 TOGARAM1Q9Y4F4 1720 aa28.42■■■□□ 2.14
TOP3B-205ENST00000434517 BCL11BQ9C0K0 894 aaPredicted RBP28.41■■■□□ 2.14
TOP3B-205ENST00000434517 KCNQ2O43526 872 aa28.4■■■□□ 2.14
TOP3B-205ENST00000434517 PRIM1P49642 420 aaKnown RBP28.39■■■□□ 2.14
TOP3B-205ENST00000434517 PLEKHF1Q96S99 279 aa28.39■■■□□ 2.14
TOP3B-205ENST00000434517 ITGB4P16144 1822 aa28.39■■■□□ 2.13
TOP3B-205ENST00000434517 VIRMAQ69YN4 1812 aaKnown RBP28.39■■■□□ 2.13
TOP3B-205ENST00000434517 APBA3O96018 575 aa28.38■■■□□ 2.13
TOP3B-205ENST00000434517 PTF1AQ7RTS3 328 aa28.38■■■□□ 2.13
TOP3B-205ENST00000434517 DCAF5Q96JK2 942 aa28.38■■■□□ 2.13
TOP3B-205ENST00000434517 BTAF1O14981 1849 aa28.38■■■□□ 2.13
TOP3B-205ENST00000434517 PSDA5PKW4 1024 aaPredicted RBP28.37■■■□□ 2.13
TOP3B-205ENST00000434517 BAG6P46379 1132 aa28.37■■■□□ 2.13
TOP3B-205ENST00000434517 MPRIPQ6WCQ1 1025 aa28.37■■■□□ 2.13
TOP3B-205ENST00000434517 CCDC146Q8IYE0 955 aa28.37■■■□□ 2.13
TOP3B-205ENST00000434517 SCN11AQ9UI33 1791 aa28.37■■■□□ 2.13
TOP3B-205ENST00000434517 MAP3K5Q99683 1374 aa28.37■■■□□ 2.13
TOP3B-205ENST00000434517 KDM6AO15550 1401 aaPredicted RBP28.35■■■□□ 2.13
TOP3B-205ENST00000434517 PNISRQ8TF01 805 aaKnown RBP28.35■■■□□ 2.13
TOP3B-205ENST00000434517 GNAT3A8MTJ3 354 aa28.34■■■□□ 2.13
TOP3B-205ENST00000434517 RUNDC1Q96C34 613 aa28.33■■■□□ 2.13
TOP3B-205ENST00000434517 DLG5Q8TDM6 1919 aa28.33■■■□□ 2.13
TOP3B-205ENST00000434517 TMOD3Q9NYL9 352 aa28.32■■■□□ 2.12
TOP3B-205ENST00000434517 ERVV-2B6SEH9 535 aa28.31■■■□□ 2.12
TOP3B-205ENST00000434517 CCER2I3L3R5 266 aa28.31■■■□□ 2.12
TOP3B-205ENST00000434517 NFE2L2Q16236 605 aa28.31■■■□□ 2.12
TOP3B-205ENST00000434517 RNMTO43148 476 aaKnown RBP28.3■■■□□ 2.12
TOP3B-205ENST00000434517 CABP4P57796 275 aa28.3■■■□□ 2.12
TOP3B-205ENST00000434517 MIER1Q8N108 512 aa28.3■■■□□ 2.12
TOP3B-205ENST00000434517 RTF1Q92541 710 aaKnown RBP28.3■■■□□ 2.12
TOP3B-205ENST00000434517 EN1Q05925 392 aaPredicted RBP28.29■■■□□ 2.12
TOP3B-205ENST00000434517 LGR6Q9HBX8 967 aa28.29■■■□□ 2.12
TOP3B-205ENST00000434517 ADAMTS7Q9UKP4 1686 aa28.29■■■□□ 2.12
TOP3B-205ENST00000434517 FAM9BQ8IZU0 186 aa28.28■■■□□ 2.12
TOP3B-205ENST00000434517 RGPD3A6NKT7 1758 aaPredicted RBP28.27■■■□□ 2.12
TOP3B-205ENST00000434517 RGPD4Q7Z3J3 1758 aa28.27■■■□□ 2.12
TOP3B-205ENST00000434517 PIGBQ92521 554 aa28.27■■■□□ 2.12
TOP3B-205ENST00000434517 PLSCR1O15162 318 aa28.24■■■□□ 2.11
TOP3B-205ENST00000434517 HTATSF1O43719 755 aaKnown RBP28.24■■■□□ 2.11
TOP3B-205ENST00000434517 TMPOP42166 694 aaKnown RBP28.24■■■□□ 2.11
TOP3B-205ENST00000434517 RIPK4P57078 832 aa28.24■■■□□ 2.11
TOP3B-205ENST00000434517 NFATC2IPQ8NCF5 419 aa28.24■■■□□ 2.11
TOP3B-205ENST00000434517 SLC52A2Q9HAB3 445 aa28.24■■■□□ 2.11
TOP3B-205ENST00000434517 MRC1P22897 1456 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms