RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 RNF20Q5VTR2 975 aa9.4□□□□□ -0.9
PTPN4-205ENST00000433888 CC2D2BQ6DHV5 1058 aa9.4□□□□□ -0.9
PTPN4-205ENST00000433888 SV2AQ7L0J3 742 aa9.4□□□□□ -0.9
PTPN4-205ENST00000433888 TRIM52Q96A61 297 aa9.4□□□□□ -0.9
PTPN4-205ENST00000433888 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.9
PTPN4-205ENST00000433888 A0A1W2PRU2 124 aa9.39□□□□□ -0.91
PTPN4-205ENST00000433888 GPC1P35052 558 aa9.39□□□□□ -0.91
PTPN4-205ENST00000433888 SCTRP47872 440 aa9.39□□□□□ -0.91
PTPN4-205ENST00000433888 TRAK2O60296 914 aa9.38□□□□□ -0.91
PTPN4-205ENST00000433888 SLURP2P0DP57 97 aa9.38□□□□□ -0.91
PTPN4-205ENST00000433888 PRICKLE2Q7Z3G6 844 aa9.38□□□□□ -0.91
PTPN4-205ENST00000433888 CDC14CA4D256 554 aa9.37□□□□□ -0.91
PTPN4-205ENST00000433888 GSK3AP49840 483 aa9.37□□□□□ -0.91
PTPN4-205ENST00000433888 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
PTPN4-205ENST00000433888 RHOQP17081 205 aa9.36□□□□□ -0.91
PTPN4-205ENST00000433888 KCNMA1Q12791 1236 aa9.36□□□□□ -0.91
PTPN4-205ENST00000433888 ZNF385CQ66K41 422 aaPredicted RBP9.36□□□□□ -0.91
PTPN4-205ENST00000433888 ZNF592Q92610 1267 aa9.36□□□□□ -0.91
PTPN4-205ENST00000433888 GRIP2Q9C0E4 1043 aa9.36□□□□□ -0.91
PTPN4-205ENST00000433888 ZNF330Q9Y3S2 320 aaPredicted RBP9.36□□□□□ -0.91
PTPN4-205ENST00000433888 MEN1O00255 615 aa9.35□□□□□ -0.91
PTPN4-205ENST00000433888 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
PTPN4-205ENST00000433888 CEP126Q9P2H0 1117 aa9.35□□□□□ -0.91
PTPN4-205ENST00000433888 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
PTPN4-205ENST00000433888 ADAMTS8Q9UP79 889 aa9.34□□□□□ -0.91
PTPN4-205ENST00000433888 CLN3Q13286 438 aa9.33□□□□□ -0.92
PTPN4-205ENST00000433888 GAS6Q14393 721 aa9.33□□□□□ -0.92
PTPN4-205ENST00000433888 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
PTPN4-205ENST00000433888 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
PTPN4-205ENST00000433888 SPATA31C2B4DYI2 1134 aa9.32□□□□□ -0.92
PTPN4-205ENST00000433888 APBB1O00213 710 aa9.32□□□□□ -0.92
PTPN4-205ENST00000433888 ARHGEF15O94989 841 aa9.32□□□□□ -0.92
PTPN4-205ENST00000433888 POU4F2Q12837 409 aa9.32□□□□□ -0.92
PTPN4-205ENST00000433888 IRF5Q13568 498 aa9.32□□□□□ -0.92
PTPN4-205ENST00000433888 CDCA7Q9BWT1 371 aaPredicted RBP9.32□□□□□ -0.92
PTPN4-205ENST00000433888 TBC1D2BQ9UPU7 963 aa9.32□□□□□ -0.92
PTPN4-205ENST00000433888 DBN1Q16643 649 aa9.31□□□□□ -0.92
PTPN4-205ENST00000433888 TRIM22Q8IYM9 498 aa9.31□□□□□ -0.92
PTPN4-205ENST00000433888 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
PTPN4-205ENST00000433888 GMCL1Q96IK5 515 aa9.31□□□□□ -0.92
PTPN4-205ENST00000433888 DYRK1BQ9Y463 629 aa9.31□□□□□ -0.92
PTPN4-205ENST00000433888 ZNF837Q96EG3 531 aaPredicted RBP9.3□□□□□ -0.92
PTPN4-205ENST00000433888 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
PTPN4-205ENST00000433888 HRH3Q9Y5N1 445 aa9.3□□□□□ -0.92
PTPN4-205ENST00000433888 GNRH1P01148 92 aa9.29□□□□□ -0.92
PTPN4-205ENST00000433888 TSGA10IPQ3SY00 556 aa9.29□□□□□ -0.92
PTPN4-205ENST00000433888 WDR44Q5JSH3 913 aa9.29□□□□□ -0.92
PTPN4-205ENST00000433888 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
PTPN4-205ENST00000433888 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
PTPN4-205ENST00000433888 ARHGEF10LQ9HCE6 1279 aa9.29□□□□□ -0.92
PTPN4-205ENST00000433888 ADAMTS2O95450 1211 aa9.28□□□□□ -0.92
PTPN4-205ENST00000433888 IL2RAP01589 272 aa9.28□□□□□ -0.92
PTPN4-205ENST00000433888 SRSF11Q05519 484 aaKnown RBP9.28□□□□□ -0.92
PTPN4-205ENST00000433888 SLC27A3Q5K4L6 730 aa9.28□□□□□ -0.92
PTPN4-205ENST00000433888 LYPD4Q6UWN0 246 aa9.27□□□□□ -0.93
PTPN4-205ENST00000433888 SVOPQ8N4V2 548 aa9.27□□□□□ -0.93
PTPN4-205ENST00000433888 XAGE2Q96GT9 111 aa9.27□□□□□ -0.93
PTPN4-205ENST00000433888 ESYT1Q9BSJ8 1104 aa9.27□□□□□ -0.93
PTPN4-205ENST00000433888 RAB6BQ9NRW1 208 aa9.27□□□□□ -0.93
PTPN4-205ENST00000433888 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
PTPN4-205ENST00000433888 CENPCQ03188 943 aa9.26□□□□□ -0.93
PTPN4-205ENST00000433888 CNKSR1Q969H4 720 aa9.26□□□□□ -0.93
PTPN4-205ENST00000433888 GAS2L1Q99501 681 aaPredicted RBP9.25□□□□□ -0.93
PTPN4-205ENST00000433888 GPR25O00155 361 aa9.24□□□□□ -0.93
PTPN4-205ENST00000433888 RASSF7Q02833 373 aa9.24□□□□□ -0.93
PTPN4-205ENST00000433888 RIPOR1Q6ZS17 1223 aa9.24□□□□□ -0.93
PTPN4-205ENST00000433888 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
PTPN4-205ENST00000433888 FHDC1Q9C0D6 1143 aaPredicted RBP9.24□□□□□ -0.93
PTPN4-205ENST00000433888 WASLO00401 505 aaPredicted RBP9.23□□□□□ -0.93
PTPN4-205ENST00000433888 THBS1P07996 1170 aa9.23□□□□□ -0.93
PTPN4-205ENST00000433888 CELA2BP08218 269 aaPredicted RBP9.23□□□□□ -0.93
PTPN4-205ENST00000433888 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPN4-205ENST00000433888 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
PTPN4-205ENST00000433888 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
PTPN4-205ENST00000433888 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
PTPN4-205ENST00000433888 H7C1W4 665 aa9.22□□□□□ -0.93
PTPN4-205ENST00000433888 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
PTPN4-205ENST00000433888 GTPBP3Q969Y2 492 aaKnown RBP9.22□□□□□ -0.93
PTPN4-205ENST00000433888 TIMMDC1Q9NPL8 285 aa9.22□□□□□ -0.93
PTPN4-205ENST00000433888 F11P03951 625 aa9.21□□□□□ -0.94
PTPN4-205ENST00000433888 VAC14Q08AM6 782 aa9.21□□□□□ -0.94
PTPN4-205ENST00000433888 GDPD2Q9HCC8 539 aa9.21□□□□□ -0.94
PTPN4-205ENST00000433888 USP4Q13107 963 aa9.2□□□□□ -0.94
PTPN4-205ENST00000433888 TMEM151AQ8N4L1 468 aa9.2□□□□□ -0.94
PTPN4-205ENST00000433888 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
PTPN4-205ENST00000433888 ZSCAN10Q96SZ4 725 aaPredicted RBP9.2□□□□□ -0.94
PTPN4-205ENST00000433888 IGF1RP08069 1367 aa9.2□□□□□ -0.94
PTPN4-205ENST00000433888 GDF11O95390 407 aa9.19□□□□□ -0.94
PTPN4-205ENST00000433888 STAU1O95793 577 aaKnown RBP9.19□□□□□ -0.94
PTPN4-205ENST00000433888 SLFNL1Q499Z3 407 aa9.19□□□□□ -0.94
PTPN4-205ENST00000433888 FOXR1Q6PIV2 292 aa9.19□□□□□ -0.94
PTPN4-205ENST00000433888 ETNK1Q9HBU6 452 aa9.19□□□□□ -0.94
PTPN4-205ENST00000433888 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
PTPN4-205ENST00000433888 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
PTPN4-205ENST00000433888 UBAP2LQ14157 1087 aaKnown RBP9.18□□□□□ -0.94
PTPN4-205ENST00000433888 RNF135Q8IUD6 432 aa9.18□□□□□ -0.94
PTPN4-205ENST00000433888 NUCKS1Q9H1E3 243 aaKnown RBP9.18□□□□□ -0.94
PTPN4-205ENST00000433888 PHKA2P46019 1235 aa9.17□□□□□ -0.94
PTPN4-205ENST00000433888 C4orf17Q53FE4 359 aa9.17□□□□□ -0.94
PTPN4-205ENST00000433888 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms