RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-205ENST00000433369 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
PTPN12-205ENST00000433369 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
PTPN12-205ENST00000433369 PLSCR1O15162 318 aa17.41■□□□□ 0.38
PTPN12-205ENST00000433369 DOT1LQ8TEK3 1739 aa17.4■□□□□ 0.38
PTPN12-205ENST00000433369 WASHC2AQ641Q2 1341 aa17.4■□□□□ 0.38
PTPN12-205ENST00000433369 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
PTPN12-205ENST00000433369 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
PTPN12-205ENST00000433369 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
PTPN12-205ENST00000433369 LRP5O75197 1615 aa17.37■□□□□ 0.37
PTPN12-205ENST00000433369 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
PTPN12-205ENST00000433369 EYA1Q99502 592 aa17.37■□□□□ 0.37
PTPN12-205ENST00000433369 NSD2O96028 1365 aa17.37■□□□□ 0.37
PTPN12-205ENST00000433369 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
PTPN12-205ENST00000433369 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
PTPN12-205ENST00000433369 PER1O15534 1290 aaPredicted RBP17.35■□□□□ 0.37
PTPN12-205ENST00000433369 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
PTPN12-205ENST00000433369 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
PTPN12-205ENST00000433369 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
PTPN12-205ENST00000433369 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
PTPN12-205ENST00000433369 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
PTPN12-205ENST00000433369 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
PTPN12-205ENST00000433369 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
PTPN12-205ENST00000433369 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
PTPN12-205ENST00000433369 CYP27B1O15528 508 aa17.31■□□□□ 0.36
PTPN12-205ENST00000433369 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
PTPN12-205ENST00000433369 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
PTPN12-205ENST00000433369 ITGB4P16144 1822 aa17.31■□□□□ 0.36
PTPN12-205ENST00000433369 CASZ1Q86V15 1759 aa17.3■□□□□ 0.36
PTPN12-205ENST00000433369 SYTL4Q96C24 671 aaPredicted RBP17.3■□□□□ 0.36
PTPN12-205ENST00000433369 LRRC4BQ9NT99 713 aa17.3■□□□□ 0.36
PTPN12-205ENST00000433369 LY75O60449 1722 aa17.3■□□□□ 0.36
PTPN12-205ENST00000433369 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
PTPN12-205ENST00000433369 IGSF1Q8N6C5 1336 aa17.28■□□□□ 0.36
PTPN12-205ENST00000433369 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
PTPN12-205ENST00000433369 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
PTPN12-205ENST00000433369 KCNQ4P56696 695 aa17.28■□□□□ 0.36
PTPN12-205ENST00000433369 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.36
PTPN12-205ENST00000433369 ZNF827Q17R98 1081 aa17.25■□□□□ 0.35
PTPN12-205ENST00000433369 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
PTPN12-205ENST00000433369 TUBGCP6Q96RT7 1819 aa17.25■□□□□ 0.35
PTPN12-205ENST00000433369 MTHFSP49914 203 aa17.24■□□□□ 0.35
PTPN12-205ENST00000433369 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
PTPN12-205ENST00000433369 IL13P35225 146 aa17.23■□□□□ 0.35
PTPN12-205ENST00000433369 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
PTPN12-205ENST00000433369 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
PTPN12-205ENST00000433369 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
PTPN12-205ENST00000433369 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
PTPN12-205ENST00000433369 PHKG2P15735 406 aa17.21■□□□□ 0.35
PTPN12-205ENST00000433369 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
PTPN12-205ENST00000433369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.357e-8■■■■□ 24.6
PTPN12-205ENST00000433369 TAF1LQ8IZX4 1826 aa17.2■□□□□ 0.34
PTPN12-205ENST00000433369 ZBTB7AO95365 584 aa17.2■□□□□ 0.34
PTPN12-205ENST00000433369 PIGBQ92521 554 aa17.2■□□□□ 0.34
PTPN12-205ENST00000433369 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
PTPN12-205ENST00000433369 SLC27A3Q5K4L6 730 aa17.19■□□□□ 0.34
PTPN12-205ENST00000433369 SULT6B1Q6IMI4 303 aa17.19■□□□□ 0.34
PTPN12-205ENST00000433369 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
PTPN12-205ENST00000433369 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
PTPN12-205ENST00000433369 KDRP35968 1356 aa17.18■□□□□ 0.34
PTPN12-205ENST00000433369 IFNL2Q8IZJ0 200 aa17.18■□□□□ 0.34
PTPN12-205ENST00000433369 SPON1Q9HCB6 807 aa17.18■□□□□ 0.34
PTPN12-205ENST00000433369 CCNL1Q9UK58 526 aaPredicted RBP17.18■□□□□ 0.34
PTPN12-205ENST00000433369 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
PTPN12-205ENST00000433369 C5P01031 1676 aa17.17■□□□□ 0.34
PTPN12-205ENST00000433369 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
PTPN12-205ENST00000433369 KDM6AO15550 1401 aaPredicted RBP17.16■□□□□ 0.34
PTPN12-205ENST00000433369 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
PTPN12-205ENST00000433369 HMOX1P09601 288 aa17.15■□□□□ 0.34
PTPN12-205ENST00000433369 PTGER2P43116 358 aa17.15■□□□□ 0.34
PTPN12-205ENST00000433369 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
PTPN12-205ENST00000433369 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
PTPN12-205ENST00000433369 VIRMAQ69YN4 1812 aaKnown RBP17.14■□□□□ 0.34
PTPN12-205ENST00000433369 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
PTPN12-205ENST00000433369 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
PTPN12-205ENST00000433369 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
PTPN12-205ENST00000433369 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
PTPN12-205ENST00000433369 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
PTPN12-205ENST00000433369 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
PTPN12-205ENST00000433369 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
PTPN12-205ENST00000433369 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
PTPN12-205ENST00000433369 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
PTPN12-205ENST00000433369 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
PTPN12-205ENST00000433369 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
PTPN12-205ENST00000433369 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
PTPN12-205ENST00000433369 AMIGO3Q86WK7 504 aa17.1■□□□□ 0.33
PTPN12-205ENST00000433369 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
PTPN12-205ENST00000433369 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
PTPN12-205ENST00000433369 UBR3Q6ZT12 1888 aa17.1■□□□□ 0.33
PTPN12-205ENST00000433369 SMIM5Q71RC9 77 aa17.09■□□□□ 0.33
PTPN12-205ENST00000433369 PPP1R1BQ9UD71 204 aaPredicted RBP17.09■□□□□ 0.33
PTPN12-205ENST00000433369 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
PTPN12-205ENST00000433369 ERVV-2B6SEH9 535 aa17.08■□□□□ 0.32
PTPN12-205ENST00000433369 HSP90AB1P08238 724 aaKnown RBP17.08■□□□□ 0.32
PTPN12-205ENST00000433369 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
PTPN12-205ENST00000433369 SIK1P57059 783 aa17.08■□□□□ 0.32
PTPN12-205ENST00000433369 ITPK1Q13572 414 aa17.08■□□□□ 0.32
PTPN12-205ENST00000433369 C1orf141Q5JVX7 400 aa17.08■□□□□ 0.32
PTPN12-205ENST00000433369 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.32
PTPN12-205ENST00000433369 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
PTPN12-205ENST00000433369 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms