RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 ITGB4P16144 1822 aa20.03■□□□□ 0.8
SEC13-212ENST00000432213 TAF1LQ8IZX4 1826 aa20.03■□□□□ 0.8
SEC13-212ENST00000432213 CHD4Q14839 1912 aa20.03■□□□□ 0.8
SEC13-212ENST00000432213 NBPF6Q5VWK0 638 aa20.02■□□□□ 0.8
SEC13-212ENST00000432213 AKT1S1Q96B36 256 aa20.02■□□□□ 0.8
SEC13-212ENST00000432213 NBPF4Q96M43 638 aa20.02■□□□□ 0.8
SEC13-212ENST00000432213 MTFR1LQ9H019 292 aa20.02■□□□□ 0.8
SEC13-212ENST00000432213 C5P01031 1676 aa20.01■□□□□ 0.79
SEC13-212ENST00000432213 RTL1A6NKG5 1358 aa20■□□□□ 0.79
SEC13-212ENST00000432213 PKD1L3Q7Z443 1732 aa20■□□□□ 0.79
SEC13-212ENST00000432213 AMPHP49418 695 aa20■□□□□ 0.79
SEC13-212ENST00000432213 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
SEC13-212ENST00000432213 SYT17Q9BSW7 474 aa20■□□□□ 0.79
SEC13-212ENST00000432213 PNPLA7Q6ZV29 1317 aa19.99■□□□□ 0.79
SEC13-212ENST00000432213 MAP2P11137 1827 aaKnown RBP19.98■□□□□ 0.79
SEC13-212ENST00000432213 CARD14Q9BXL6 1004 aa19.98■□□□□ 0.79
SEC13-212ENST00000432213 SYTL4Q96C24 671 aaPredicted RBP19.97■□□□□ 0.79
SEC13-212ENST00000432213 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
SEC13-212ENST00000432213 UTRNP46939 3433 aa19.95■□□□□ 0.78
SEC13-212ENST00000432213 ZCRB1Q8TBF4 217 aaKnown RBP19.95■□□□□ 0.78
SEC13-212ENST00000432213 NSD3Q9BZ95 1437 aa19.94■□□□□ 0.78
SEC13-212ENST00000432213 TMF1P82094 1093 aa19.94■□□□□ 0.78
SEC13-212ENST00000432213 ARXQ96QS3 562 aa19.94■□□□□ 0.78
SEC13-212ENST00000432213 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
SEC13-212ENST00000432213 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
SEC13-212ENST00000432213 INSRP06213 1382 aa19.92■□□□□ 0.78
SEC13-212ENST00000432213 MAP3K5Q99683 1374 aa19.92■□□□□ 0.78
SEC13-212ENST00000432213 SLC27A3Q5K4L6 730 aa19.91■□□□□ 0.78
SEC13-212ENST00000432213 NCAPD2Q15021 1401 aa19.91■□□□□ 0.78
SEC13-212ENST00000432213 UBR3Q6ZT12 1888 aa19.9■□□□□ 0.78
SEC13-212ENST00000432213 FLT4P35916 1363 aa19.9■□□□□ 0.78
SEC13-212ENST00000432213 C4BP0C0L5 1744 aa19.89■□□□□ 0.77
SEC13-212ENST00000432213 CYP27B1O15528 508 aa19.88■□□□□ 0.77
SEC13-212ENST00000432213 ZNF784Q8NCA9 323 aaPredicted RBP19.88■□□□□ 0.77
SEC13-212ENST00000432213 NLGN2Q8NFZ4 835 aa19.88■□□□□ 0.77
SEC13-212ENST00000432213 CCNL1Q9UK58 526 aaPredicted RBP19.88■□□□□ 0.77
SEC13-212ENST00000432213 SMG6Q86US8 1419 aaKnown RBP19.87■□□□□ 0.77
SEC13-212ENST00000432213 AMIGO3Q86WK7 504 aa19.87■□□□□ 0.77
SEC13-212ENST00000432213 TFCP2L1Q9NZI6 479 aa19.87■□□□□ 0.77
SEC13-212ENST00000432213 DCAF8L1A6NGE4 600 aa19.86■□□□□ 0.77
SEC13-212ENST00000432213 COL23A1Q86Y22 540 aaPredicted RBP19.86■□□□□ 0.77
SEC13-212ENST00000432213 KLHL34Q8N239 644 aa19.86■□□□□ 0.77
SEC13-212ENST00000432213 SMIM5Q71RC9 77 aa19.85■□□□□ 0.77
SEC13-212ENST00000432213 MSL1Q68DK7 614 aa19.84■□□□□ 0.77
SEC13-212ENST00000432213 RAPGEF4Q8WZA2 1011 aa19.84■□□□□ 0.77
SEC13-212ENST00000432213 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
SEC13-212ENST00000432213 KIF24Q5T7B8 1368 aa19.83■□□□□ 0.76
SEC13-212ENST00000432213 PALLDQ8WX93 1383 aa19.83■□□□□ 0.76
SEC13-212ENST00000432213 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
SEC13-212ENST00000432213 PCDH11XQ9BZA7 1347 aa19.82■□□□□ 0.76
SEC13-212ENST00000432213 PCDH11YQ9BZA8 1340 aa19.82■□□□□ 0.76
SEC13-212ENST00000432213 SLC24A1O60721 1099 aa19.82■□□□□ 0.76
SEC13-212ENST00000432213 SLC16A10Q8TF71 515 aa19.82■□□□□ 0.76
SEC13-212ENST00000432213 GOLGB1Q14789 3259 aaKnown RBP19.82■□□□□ 0.76
SEC13-212ENST00000432213 PPM1GO15355 546 aaPredicted RBP19.8■□□□□ 0.76
SEC13-212ENST00000432213 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
SEC13-212ENST00000432213 YBX3P16989 372 aaKnown RBP eCLIP19.78■□□□□ 0.76
SEC13-212ENST00000432213 EYA1Q99502 592 aa19.78■□□□□ 0.76
SEC13-212ENST00000432213 MSH5O43196 834 aa19.77■□□□□ 0.76
SEC13-212ENST00000432213 POLD1P28340 1107 aa19.77■□□□□ 0.76
SEC13-212ENST00000432213 CDCA8Q53HL2 280 aa19.77■□□□□ 0.76
SEC13-212ENST00000432213 PIGBQ92521 554 aa19.77■□□□□ 0.76
SEC13-212ENST00000432213 POLKQ9UBT6 870 aa19.77■□□□□ 0.76
SEC13-212ENST00000432213 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
SEC13-212ENST00000432213 GPR162Q16538 588 aa19.76■□□□□ 0.75
SEC13-212ENST00000432213 PELP1Q8IZL8 1130 aaKnown RBP19.76■□□□□ 0.75
SEC13-212ENST00000432213 COL5A3P25940 1745 aaPredicted RBP19.75■□□□□ 0.75
SEC13-212ENST00000432213 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
SEC13-212ENST00000432213 TNNT2P45379 298 aaPredicted RBP19.74■□□□□ 0.75
SEC13-212ENST00000432213 NKX1-1Q15270 411 aaPredicted RBP19.74■□□□□ 0.75
SEC13-212ENST00000432213 POLR3GLQ9BT43 218 aa19.74■□□□□ 0.75
SEC13-212ENST00000432213 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
SEC13-212ENST00000432213 EIF4A2Q14240 407 aaKnown RBP19.73■□□□□ 0.75
SEC13-212ENST00000432213 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
SEC13-212ENST00000432213 VIRMAQ69YN4 1812 aaKnown RBP19.72■□□□□ 0.75
SEC13-212ENST00000432213 ITPK1Q13572 414 aa19.71■□□□□ 0.75
SEC13-212ENST00000432213 ASAP1Q9ULH1 1129 aa19.71■□□□□ 0.75
SEC13-212ENST00000432213 C4AP0C0L4 1744 aa19.71■□□□□ 0.75
SEC13-212ENST00000432213 MYH14Q7Z406 1995 aaKnown RBP19.7■□□□□ 0.74
SEC13-212ENST00000432213 PHF14O94880 888 aa19.7■□□□□ 0.74
SEC13-212ENST00000432213 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
SEC13-212ENST00000432213 PHKG2P15735 406 aa19.69■□□□□ 0.74
SEC13-212ENST00000432213 N4BP2Q86UW6 1770 aaPredicted RBP19.69■□□□□ 0.74
SEC13-212ENST00000432213 KIF13BQ9NQT8 1826 aa19.69■□□□□ 0.74
SEC13-212ENST00000432213 KDRP35968 1356 aa19.69■□□□□ 0.74
SEC13-212ENST00000432213 ZNF831Q5JPB2 1677 aa19.68■□□□□ 0.74
SEC13-212ENST00000432213 WWC3Q9ULE0 1092 aa19.68■□□□□ 0.74
SEC13-212ENST00000432213 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
SEC13-212ENST00000432213 LOC102724428A0A0B4J2F2 783 aa19.67■□□□□ 0.74
SEC13-212ENST00000432213 SIK1P57059 783 aa19.67■□□□□ 0.74
SEC13-212ENST00000432213 SLC4A9Q96Q91 983 aa19.67■□□□□ 0.74
SEC13-212ENST00000432213 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
SEC13-212ENST00000432213 SPG7Q9UQ90 795 aa19.67■□□□□ 0.74
SEC13-212ENST00000432213 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
SEC13-212ENST00000432213 TJP1Q07157 1748 aa19.66■□□□□ 0.74
SEC13-212ENST00000432213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.66■□□□□ 0.74
SEC13-212ENST00000432213 AK7Q96M32 723 aa19.66■□□□□ 0.74
SEC13-212ENST00000432213 ATG3Q9NT62 314 aa19.66■□□□□ 0.74
SEC13-212ENST00000432213 SCN11AQ9UI33 1791 aa19.65■□□□□ 0.74
SEC13-212ENST00000432213 SMARCC1Q92922 1105 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms