RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 RGPD1P0DJD0 1748 aa20.22■□□□□ 0.83
CDRT15-202ENST00000431716 DISP2A7MBM2 1401 aa20.21■□□□□ 0.83
CDRT15-202ENST00000431716 APBA3O96018 575 aa20.21■□□□□ 0.83
CDRT15-202ENST00000431716 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
CDRT15-202ENST00000431716 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
CDRT15-202ENST00000431716 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDRT15-202ENST00000431716 EP400Q96L91 3159 aa20.21■□□□□ 0.83
CDRT15-202ENST00000431716 KDRP35968 1356 aa20.21■□□□□ 0.83
CDRT15-202ENST00000431716 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
CDRT15-202ENST00000431716 PLEKHG2Q9H7P9 1386 aa20.2■□□□□ 0.82
CDRT15-202ENST00000431716 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
CDRT15-202ENST00000431716 MARCH10Q8NA82 808 aaPredicted RBP20.19■□□□□ 0.82
CDRT15-202ENST00000431716 FCHSD2O94868 740 aa20.18■□□□□ 0.82
CDRT15-202ENST00000431716 HMOX1P09601 288 aa20.18■□□□□ 0.82
CDRT15-202ENST00000431716 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
CDRT15-202ENST00000431716 WNK3Q9BYP7 1800 aa20.18■□□□□ 0.82
CDRT15-202ENST00000431716 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
CDRT15-202ENST00000431716 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
CDRT15-202ENST00000431716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.17■□□□□ 0.82
CDRT15-202ENST00000431716 PARP4Q9UKK3 1724 aaKnown RBP20.16■□□□□ 0.82
CDRT15-202ENST00000431716 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
CDRT15-202ENST00000431716 PNNQ9H307 717 aaKnown RBP20.16■□□□□ 0.82
CDRT15-202ENST00000431716 MEGF6O75095 1541 aa20.16■□□□□ 0.82
CDRT15-202ENST00000431716 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
CDRT15-202ENST00000431716 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
CDRT15-202ENST00000431716 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
CDRT15-202ENST00000431716 SPG7Q9UQ90 795 aa20.15■□□□□ 0.82
CDRT15-202ENST00000431716 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
CDRT15-202ENST00000431716 PLEKHO1Q53GL0 409 aaPredicted RBP20.14■□□□□ 0.81
CDRT15-202ENST00000431716 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
CDRT15-202ENST00000431716 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
CDRT15-202ENST00000431716 MIER1Q8N108 512 aa20.13■□□□□ 0.81
CDRT15-202ENST00000431716 DDX54Q8TDD1 881 aaKnown RBP20.13■□□□□ 0.81
CDRT15-202ENST00000431716 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
CDRT15-202ENST00000431716 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
CDRT15-202ENST00000431716 CAMKK2Q96RR4 588 aa20.12■□□□□ 0.81
CDRT15-202ENST00000431716 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
CDRT15-202ENST00000431716 NEFMP07197 916 aa20.11■□□□□ 0.81
CDRT15-202ENST00000431716 PRKAR2BP31323 418 aa20.11■□□□□ 0.81
CDRT15-202ENST00000431716 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
CDRT15-202ENST00000431716 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
CDRT15-202ENST00000431716 ADAMTS8Q9UP79 889 aa20.1■□□□□ 0.81
CDRT15-202ENST00000431716 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.81
CDRT15-202ENST00000431716 BCL9O00512 1426 aa20.08■□□□□ 0.8
CDRT15-202ENST00000431716 PKD1L3Q7Z443 1732 aa20.07■□□□□ 0.8
CDRT15-202ENST00000431716 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
CDRT15-202ENST00000431716 PLEKHF1Q96S99 279 aa20.07■□□□□ 0.8
CDRT15-202ENST00000431716 CYP27B1O15528 508 aa20.06■□□□□ 0.8
CDRT15-202ENST00000431716 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
CDRT15-202ENST00000431716 PTF1AQ7RTS3 328 aa20.06■□□□□ 0.8
CDRT15-202ENST00000431716 GAS2L2Q8NHY3 880 aa20.06■□□□□ 0.8
CDRT15-202ENST00000431716 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
CDRT15-202ENST00000431716 MAPK8IP3Q9UPT6 1336 aa20.05■□□□□ 0.8
CDRT15-202ENST00000431716 PLSCR1O15162 318 aa20.05■□□□□ 0.8
CDRT15-202ENST00000431716 KCNQ2O43526 872 aa20.05■□□□□ 0.8
CDRT15-202ENST00000431716 MTHFSDQ2M296 383 aaKnown RBP20.05■□□□□ 0.8
CDRT15-202ENST00000431716 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
CDRT15-202ENST00000431716 NBPF14Q5TI25 921 aa20.05■□□□□ 0.8
CDRT15-202ENST00000431716 PSDA5PKW4 1024 aaPredicted RBP20.04■□□□□ 0.8
CDRT15-202ENST00000431716 HSP90AB1P08238 724 aaKnown RBP20.04■□□□□ 0.8
CDRT15-202ENST00000431716 PHKG2P15735 406 aa20.04■□□□□ 0.8
CDRT15-202ENST00000431716 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
CDRT15-202ENST00000431716 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
CDRT15-202ENST00000431716 SHANK3Q9BYB0 1731 aa20.03■□□□□ 0.8
CDRT15-202ENST00000431716 AKAP4Q5JQC9 854 aa20.03■□□□□ 0.8
CDRT15-202ENST00000431716 R3HDM1Q15032 1099 aaKnown RBP20.02■□□□□ 0.8
CDRT15-202ENST00000431716 SYTL4Q96C24 671 aaPredicted RBP20.02■□□□□ 0.8
CDRT15-202ENST00000431716 TNS1Q9HBL0 1735 aaKnown RBP20.02■□□□□ 0.79
CDRT15-202ENST00000431716 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
CDRT15-202ENST00000431716 KAT6BQ8WYB5 2073 aa20.01■□□□□ 0.79
CDRT15-202ENST00000431716 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
CDRT15-202ENST00000431716 DCAF5Q96JK2 942 aa20■□□□□ 0.79
CDRT15-202ENST00000431716 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
CDRT15-202ENST00000431716 NFE2L2Q16236 605 aa19.99■□□□□ 0.79
CDRT15-202ENST00000431716 PRIM1P49642 420 aaKnown RBP19.98■□□□□ 0.79
CDRT15-202ENST00000431716 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
CDRT15-202ENST00000431716 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
CDRT15-202ENST00000431716 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
CDRT15-202ENST00000431716 TXNRD1Q16881 649 aa19.96■□□□□ 0.79
CDRT15-202ENST00000431716 MPRIPQ6WCQ1 1025 aa19.96■□□□□ 0.79
CDRT15-202ENST00000431716 ERVV-2B6SEH9 535 aa19.95■□□□□ 0.78
CDRT15-202ENST00000431716 PROM2Q8N271 834 aa19.95■□□□□ 0.78
CDRT15-202ENST00000431716 RTF1Q92541 710 aaKnown RBP19.95■□□□□ 0.78
CDRT15-202ENST00000431716 APAF1O14727 1248 aa19.94■□□□□ 0.78
CDRT15-202ENST00000431716 RIPK4P57078 832 aa19.94■□□□□ 0.78
CDRT15-202ENST00000431716 RNMTO43148 476 aaKnown RBP19.93■□□□□ 0.78
CDRT15-202ENST00000431716 LMOD3Q0VAK6 560 aa19.93■□□□□ 0.78
CDRT15-202ENST00000431716 SBF2Q86WG5 1849 aa19.92■□□□□ 0.78
CDRT15-202ENST00000431716 LGR6Q9HBX8 967 aa19.92■□□□□ 0.78
CDRT15-202ENST00000431716 KDM6AO15550 1401 aaPredicted RBP19.92■□□□□ 0.78
CDRT15-202ENST00000431716 CABP4P57796 275 aa19.91■□□□□ 0.78
CDRT15-202ENST00000431716 IL17REQ8NFR9 667 aa19.91■□□□□ 0.78
CDRT15-202ENST00000431716 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
CDRT15-202ENST00000431716 NCBP3Q53F19 620 aaKnown RBP19.9■□□□□ 0.78
CDRT15-202ENST00000431716 STK32BQ9NY57 414 aa19.9■□□□□ 0.78
CDRT15-202ENST00000431716 TMOD3Q9NYL9 352 aa19.9■□□□□ 0.78
CDRT15-202ENST00000431716 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
CDRT15-202ENST00000431716 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
CDRT15-202ENST00000431716 DLG5Q8TDM6 1919 aa19.9■□□□□ 0.78
CDRT15-202ENST00000431716 NHSQ6T4R5 1651 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms