RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 MARCH10Q8NA82 808 aaPredicted RBP24.67■■□□□ 1.54
RFTN1-202ENST00000431547 WNK3Q9BYP7 1800 aa24.67■■□□□ 1.54
RFTN1-202ENST00000431547 LRRC37A3O60309 1634 aa24.67■■□□□ 1.54
RFTN1-202ENST00000431547 HMOX1P09601 288 aa24.66■■□□□ 1.54
RFTN1-202ENST00000431547 FAM182BQ5T319 152 aa24.65■■□□□ 1.54
RFTN1-202ENST00000431547 FAM196AQ6ZSG2 479 aa24.64■■□□□ 1.54
RFTN1-202ENST00000431547 SPG7Q9UQ90 795 aa24.64■■□□□ 1.54
RFTN1-202ENST00000431547 BRWD3Q6RI45 1802 aa24.63■■□□□ 1.53
RFTN1-202ENST00000431547 U2AF1L5P0DN76 240 aaPredicted RBP24.63■■□□□ 1.53
RFTN1-202ENST00000431547 U2AF1Q01081 240 aaKnown RBP eCLIP24.63■■□□□ 1.53
RFTN1-202ENST00000431547 DDX54Q8TDD1 881 aaKnown RBP24.63■■□□□ 1.53
RFTN1-202ENST00000431547 AMOTQ4VCS5 1084 aa24.62■■□□□ 1.53
RFTN1-202ENST00000431547 PLEKHO1Q53GL0 409 aaPredicted RBP24.62■■□□□ 1.53
RFTN1-202ENST00000431547 FCHSD2O94868 740 aa24.61■■□□□ 1.53
RFTN1-202ENST00000431547 PCDH11XQ9BZA7 1347 aa24.61■■□□□ 1.53
RFTN1-202ENST00000431547 PCDH11YQ9BZA8 1340 aa24.61■■□□□ 1.53
RFTN1-202ENST00000431547 BCL9O00512 1426 aa24.6■■□□□ 1.53
RFTN1-202ENST00000431547 RSPH6AQ9H0K4 717 aa24.59■■□□□ 1.53
RFTN1-202ENST00000431547 CYP27B1O15528 508 aa24.58■■□□□ 1.53
RFTN1-202ENST00000431547 DIEXFQ68CQ4 756 aaKnown RBP24.58■■□□□ 1.53
RFTN1-202ENST00000431547 PRKAR2BP31323 418 aa24.56■■□□□ 1.52
RFTN1-202ENST00000431547 IFNL2Q8IZJ0 200 aa24.56■■□□□ 1.52
RFTN1-202ENST00000431547 SOCS7O14512 581 aa24.55■■□□□ 1.52
RFTN1-202ENST00000431547 CCDC184Q52MB2 194 aa24.55■■□□□ 1.52
RFTN1-202ENST00000431547 UPF1Q92900 1129 aaKnown RBP eCLIP24.55■■□□□ 1.52
RFTN1-202ENST00000431547 PHKG2P15735 406 aa24.54■■□□□ 1.52
RFTN1-202ENST00000431547 NKX1-1Q15270 411 aaPredicted RBP24.54■■□□□ 1.52
RFTN1-202ENST00000431547 CCDC125Q86Z20 511 aa24.54■■□□□ 1.52
RFTN1-202ENST00000431547 PKD1L3Q7Z443 1732 aa24.54■■□□□ 1.52
RFTN1-202ENST00000431547 WDR43Q15061 677 aaKnown RBP eCLIP24.53■■□□□ 1.52
RFTN1-202ENST00000431547 ZNF530Q6P9A1 599 aaPredicted RBP24.53■■□□□ 1.52
RFTN1-202ENST00000431547 PNNQ9H307 717 aaKnown RBP24.53■■□□□ 1.52
RFTN1-202ENST00000431547 MTHFSDQ2M296 383 aaKnown RBP24.52■■□□□ 1.52
RFTN1-202ENST00000431547 PHACTR3Q96KR7 559 aa24.52■■□□□ 1.52
RFTN1-202ENST00000431547 MRS2Q9HD23 443 aa24.51■■□□□ 1.51
RFTN1-202ENST00000431547 SHANK3Q9BYB0 1731 aa24.5■■□□□ 1.51
RFTN1-202ENST00000431547 TRIM37O94972 964 aa24.5■■□□□ 1.51
RFTN1-202ENST00000431547 PLEKHF1Q96S99 279 aa24.5■■□□□ 1.51
RFTN1-202ENST00000431547 ADAMTS8Q9UP79 889 aa24.5■■□□□ 1.51
RFTN1-202ENST00000431547 HSP90AB1P08238 724 aaKnown RBP24.49■■□□□ 1.51
RFTN1-202ENST00000431547 C1orf141Q5JVX7 400 aa24.49■■□□□ 1.51
RFTN1-202ENST00000431547 BCL11BQ9C0K0 894 aaPredicted RBP24.49■■□□□ 1.51
RFTN1-202ENST00000431547 AKAP4Q5JQC9 854 aa24.48■■□□□ 1.51
RFTN1-202ENST00000431547 GAS2L2Q8NHY3 880 aa24.48■■□□□ 1.51
RFTN1-202ENST00000431547 PNISRQ8TF01 805 aaKnown RBP24.48■■□□□ 1.51
RFTN1-202ENST00000431547 NEFMP07197 916 aa24.47■■□□□ 1.51
RFTN1-202ENST00000431547 ACSBG1Q96GR2 724 aa24.47■■□□□ 1.51
RFTN1-202ENST00000431547 KCNQ2O43526 872 aa24.46■■□□□ 1.51
RFTN1-202ENST00000431547 DCAF5Q96JK2 942 aa24.46■■□□□ 1.51
RFTN1-202ENST00000431547 PRIM1P49642 420 aaKnown RBP24.45■■□□□ 1.5
RFTN1-202ENST00000431547 SF3B2Q13435 895 aaKnown RBP24.45■■□□□ 1.5
RFTN1-202ENST00000431547 PTF1AQ7RTS3 328 aa24.44■■□□□ 1.5
RFTN1-202ENST00000431547 MAPK8IP3Q9UPT6 1336 aa24.42■■□□□ 1.5
RFTN1-202ENST00000431547 CCER2I3L3R5 266 aa24.42■■□□□ 1.5
RFTN1-202ENST00000431547 MPRIPQ6WCQ1 1025 aa24.42■■□□□ 1.5
RFTN1-202ENST00000431547 GNAT3A8MTJ3 354 aa24.41■■□□□ 1.5
RFTN1-202ENST00000431547 ERVV-2B6SEH9 535 aa24.41■■□□□ 1.5
RFTN1-202ENST00000431547 APBA3O96018 575 aa24.41■■□□□ 1.5
RFTN1-202ENST00000431547 SYTL4Q96C24 671 aaPredicted RBP24.41■■□□□ 1.5
RFTN1-202ENST00000431547 RUNDC1Q96C34 613 aa24.41■■□□□ 1.5
RFTN1-202ENST00000431547 EP400Q96L91 3159 aa24.4■■□□□ 1.5
RFTN1-202ENST00000431547 MAP3K5Q99683 1374 aa24.4■■□□□ 1.5
RFTN1-202ENST00000431547 KDM6AO15550 1401 aaPredicted RBP24.39■■□□□ 1.5
RFTN1-202ENST00000431547 BAG6P46379 1132 aa24.39■■□□□ 1.49
RFTN1-202ENST00000431547 RNMTO43148 476 aaKnown RBP24.38■■□□□ 1.49
RFTN1-202ENST00000431547 HTATSF1O43719 755 aaKnown RBP24.38■■□□□ 1.49
RFTN1-202ENST00000431547 NFE2L2Q16236 605 aa24.38■■□□□ 1.49
RFTN1-202ENST00000431547 CCDC146Q8IYE0 955 aa24.38■■□□□ 1.49
RFTN1-202ENST00000431547 MIER1Q8N108 512 aa24.38■■□□□ 1.49
RFTN1-202ENST00000431547 LGR6Q9HBX8 967 aa24.38■■□□□ 1.49
RFTN1-202ENST00000431547 NHSQ6T4R5 1651 aa24.37■■□□□ 1.49
RFTN1-202ENST00000431547 PLSCR1O15162 318 aa24.37■■□□□ 1.49
RFTN1-202ENST00000431547 IL17REQ8NFR9 667 aa24.36■■□□□ 1.49
RFTN1-202ENST00000431547 PIGBQ92521 554 aa24.36■■□□□ 1.49
RFTN1-202ENST00000431547 TMOD3Q9NYL9 352 aa24.36■■□□□ 1.49
RFTN1-202ENST00000431547 SBF2Q86WG5 1849 aa24.35■■□□□ 1.49
RFTN1-202ENST00000431547 CABP4P57796 275 aa24.35■■□□□ 1.49
RFTN1-202ENST00000431547 DEFB132Q7Z7B7 95 aa24.35■■□□□ 1.49
RFTN1-202ENST00000431547 TMPOP42166 694 aaKnown RBP24.34■■□□□ 1.49
RFTN1-202ENST00000431547 RTF1Q92541 710 aaKnown RBP24.34■■□□□ 1.49
RFTN1-202ENST00000431547 DOT1LQ8TEK3 1739 aa24.33■■□□□ 1.49
RFTN1-202ENST00000431547 EN1Q05925 392 aaPredicted RBP24.33■■□□□ 1.49
RFTN1-202ENST00000431547 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
RFTN1-202ENST00000431547 TNS1Q9HBL0 1735 aaKnown RBP24.32■■□□□ 1.48
RFTN1-202ENST00000431547 NFATC2IPQ8NCF5 419 aa24.32■■□□□ 1.48
RFTN1-202ENST00000431547 SLC52A2Q9HAB3 445 aa24.32■■□□□ 1.48
RFTN1-202ENST00000431547 TOGARAM1Q9Y4F4 1720 aa24.32■■□□□ 1.48
RFTN1-202ENST00000431547 CEMIPQ8WUJ3 1361 aa24.31■■□□□ 1.48
RFTN1-202ENST00000431547 RIPK4P57078 832 aa24.31■■□□□ 1.48
RFTN1-202ENST00000431547 FAM9BQ8IZU0 186 aa24.31■■□□□ 1.48
RFTN1-202ENST00000431547 APAF1O14727 1248 aa24.29■■□□□ 1.48
RFTN1-202ENST00000431547 EZH2Q15910 746 aaKnown RBP24.29■■□□□ 1.48
RFTN1-202ENST00000431547 SMARCC1Q92922 1105 aaPredicted RBP24.29■■□□□ 1.48
RFTN1-202ENST00000431547 ADAMTS7Q9UKP4 1686 aa24.29■■□□□ 1.48
RFTN1-202ENST00000431547 TEFQ10587 303 aa24.28■■□□□ 1.48
RFTN1-202ENST00000431547 MCM10Q7L590 875 aa24.28■■□□□ 1.48
RFTN1-202ENST00000431547 RRP7AQ9Y3A4 280 aaKnown RBP24.28■■□□□ 1.48
RFTN1-202ENST00000431547 MRC1P22897 1456 aa24.27■■□□□ 1.48
RFTN1-202ENST00000431547 LMOD3Q0VAK6 560 aa24.27■■□□□ 1.48
RFTN1-202ENST00000431547 DCTN1Q14203 1278 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms