RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 POLR3GO15318 223 aaPredicted RBP13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 CCDC148Q8NFR7 591 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 ATF3P18847 181 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 TRERF1Q96PN7 1200 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 C16orf45Q96MC5 204 aaPredicted RBP13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 IL1RAPL2Q9NP60 686 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 CRACR2AQ9BSW2 395 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 TMEM57Q8N5G2 664 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 SLC12A5Q9H2X9 1139 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 PRAM1Q96QH2 718 aa13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
RIMKLA-202ENST00000431473 CDKL5O76039 1030 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 SSBP05455 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 GOLGA6L10A0A0M3HER8 536 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 ZHX1Q9UKY1 873 aaPredicted RBP13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 CLIP2Q9UDT6 1046 aa13.74□□□□□ -0.21
RIMKLA-202ENST00000431473 CCDC83Q8IWF9 413 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 GIMAP7Q8NHV1 300 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 CCDC113Q9H0I3 377 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 GNL3LQ9NVN8 582 aaKnown RBP13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 CGNQ9P2M7 1197 aaKnown RBP13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 ZNF397Q8NF99 534 aaPredicted RBP13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 NUTM1Q86Y26 1132 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 KLHL10Q6JEL2 608 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 RAI14Q9P0K7 980 aa13.73□□□□□ -0.21
RIMKLA-202ENST00000431473 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 TDO2P48775 406 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 NOL7Q9UMY1 257 aaKnown RBP13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 SSR1P43307 286 aaKnown RBP13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 CCDC57Q2TAC2 916 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 SHTN1A0MZ66 631 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 CASKIN1Q8WXD9 1431 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
RIMKLA-202ENST00000431473 MATR3P43243 847 aaKnown RBP eCLIP13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 EHBP1L1Q8N3D4 1523 aa13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 GOPCQ9HD26 462 aa13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 NKTRP30414 1462 aaKnown RBP13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 ESCO1Q5FWF5 840 aa13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 CDK19Q9BWU1 502 aa13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 KIF5CO60282 957 aa13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 BCCIPQ9P287 314 aaKnown RBP eCLIP13.71□□□□□ -0.21
RIMKLA-202ENST00000431473 RRS1Q15050 365 aaKnown RBP13.71□□□□□ -0.22
RIMKLA-202ENST00000431473 TICAM2Q86XR7 235 aa13.71□□□□□ -0.22
RIMKLA-202ENST00000431473 DNA2P51530 1060 aa13.71□□□□□ -0.22
RIMKLA-202ENST00000431473 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 EZRP15311 586 aaKnown RBP13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 CKAP2LQ8IYA6 745 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 DDX54Q8TDD1 881 aaKnown RBP13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 URI1O94763 535 aaPredicted RBP13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 BTBD11A6QL63 1104 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 TNPO1Q92973 898 aaKnown RBP13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 TIAM1Q13009 1591 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 SOGA3Q5TF21 947 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 GPATCH11Q8N954 259 aa13.7□□□□□ -0.22
RIMKLA-202ENST00000431473 MAP9Q49MG5 647 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 TAF4BQ92750 862 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 TNNT1P13805 278 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 SSFA2P28290 1259 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 USP25Q9UHP3 1055 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 CABP4P57796 275 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
RIMKLA-202ENST00000431473 RBM25P49756 843 aaKnown RBP13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 SPA17Q15506 151 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 CCDC85AQ96PX6 553 aaPredicted RBP13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms