RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 PRIM1P49642 420 aaKnown RBP19.41■□□□□ 0.7
SEC13-211ENST00000431352 KCNQ4P56696 695 aa19.41■□□□□ 0.7
SEC13-211ENST00000431352 NBPF6Q5VWK0 638 aa19.41■□□□□ 0.7
SEC13-211ENST00000431352 NBPF4Q96M43 638 aa19.41■□□□□ 0.7
SEC13-211ENST00000431352 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
SEC13-211ENST00000431352 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
SEC13-211ENST00000431352 NSD3Q9BZ95 1437 aa19.39■□□□□ 0.69
SEC13-211ENST00000431352 NSD2O96028 1365 aa19.38■□□□□ 0.69
SEC13-211ENST00000431352 RAPGEF4Q8WZA2 1011 aa19.38■□□□□ 0.69
SEC13-211ENST00000431352 HSP90AB2PQ58FF8 381 aa19.37■□□□□ 0.69
SEC13-211ENST00000431352 SLC27A3Q5K4L6 730 aa19.37■□□□□ 0.69
SEC13-211ENST00000431352 AKT1S1Q96B36 256 aa19.37■□□□□ 0.69
SEC13-211ENST00000431352 SGIP1Q9BQI5 828 aa19.37■□□□□ 0.69
SEC13-211ENST00000431352 SYT17Q9BSW7 474 aa19.37■□□□□ 0.69
SEC13-211ENST00000431352 FLT4P35916 1363 aa19.36■□□□□ 0.69
SEC13-211ENST00000431352 KLHL34Q8N239 644 aa19.36■□□□□ 0.69
SEC13-211ENST00000431352 ARXQ96QS3 562 aa19.36■□□□□ 0.69
SEC13-211ENST00000431352 INSRP06213 1382 aa19.35■□□□□ 0.69
SEC13-211ENST00000431352 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
SEC13-211ENST00000431352 TFCP2L1Q9NZI6 479 aa19.35■□□□□ 0.69
SEC13-211ENST00000431352 PNPLA7Q6ZV29 1317 aa19.34■□□□□ 0.69
SEC13-211ENST00000431352 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
SEC13-211ENST00000431352 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
SEC13-211ENST00000431352 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
SEC13-211ENST00000431352 CCNL1Q9UK58 526 aaPredicted RBP19.34■□□□□ 0.69
SEC13-211ENST00000431352 PPM1GO15355 546 aaPredicted RBP19.33■□□□□ 0.68
SEC13-211ENST00000431352 EMILIN1Q9Y6C2 1016 aa19.33■□□□□ 0.68
SEC13-211ENST00000431352 TUBGCP6Q96RT7 1819 aa19.32■□□□□ 0.68
SEC13-211ENST00000431352 CGNL1Q0VF96 1302 aa19.32■□□□□ 0.68
SEC13-211ENST00000431352 LY75O60449 1722 aa19.32■□□□□ 0.68
SEC13-211ENST00000431352 PCDH11XQ9BZA7 1347 aa19.31■□□□□ 0.68
SEC13-211ENST00000431352 PCDH11YQ9BZA8 1340 aa19.31■□□□□ 0.68
SEC13-211ENST00000431352 QSER1Q2KHR3 1735 aa19.31■□□□□ 0.68
SEC13-211ENST00000431352 POLD1P28340 1107 aa19.3■□□□□ 0.68
SEC13-211ENST00000431352 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
SEC13-211ENST00000431352 MSH5O43196 834 aa19.29■□□□□ 0.68
SEC13-211ENST00000431352 SLC16A10Q8TF71 515 aa19.28■□□□□ 0.68
SEC13-211ENST00000431352 MPRIPQ6WCQ1 1025 aa19.27■□□□□ 0.68
SEC13-211ENST00000431352 MAP3K5Q99683 1374 aa19.27■□□□□ 0.68
SEC13-211ENST00000431352 CYP27B1O15528 508 aa19.26■□□□□ 0.67
SEC13-211ENST00000431352 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
SEC13-211ENST00000431352 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
SEC13-211ENST00000431352 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
SEC13-211ENST00000431352 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
SEC13-211ENST00000431352 C5P01031 1676 aa19.24■□□□□ 0.67
SEC13-211ENST00000431352 TNNT2P45379 298 aaPredicted RBP19.24■□□□□ 0.67
SEC13-211ENST00000431352 GPR162Q16538 588 aa19.24■□□□□ 0.67
SEC13-211ENST00000431352 MSL1Q68DK7 614 aa19.24■□□□□ 0.67
SEC13-211ENST00000431352 PKD1L3Q7Z443 1732 aa19.24■□□□□ 0.67
SEC13-211ENST00000431352 ANKRD26Q9UPS8 1709 aa19.24■□□□□ 0.67
SEC13-211ENST00000431352 COL23A1Q86Y22 540 aaPredicted RBP19.23■□□□□ 0.67
SEC13-211ENST00000431352 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
SEC13-211ENST00000431352 CLSPNQ9HAW4 1339 aa19.22■□□□□ 0.67
SEC13-211ENST00000431352 COL24A1Q17RW2 1714 aa19.21■□□□□ 0.67
SEC13-211ENST00000431352 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
SEC13-211ENST00000431352 WASHC2AQ641Q2 1341 aa19.21■□□□□ 0.67
SEC13-211ENST00000431352 UTRNP46939 3433 aa19.21■□□□□ 0.66
SEC13-211ENST00000431352 NCAPD2Q15021 1401 aa19.2■□□□□ 0.66
SEC13-211ENST00000431352 EYA1Q99502 592 aa19.2■□□□□ 0.66
SEC13-211ENST00000431352 SPG7Q9UQ90 795 aa19.2■□□□□ 0.66
SEC13-211ENST00000431352 ITGB4P16144 1822 aa19.19■□□□□ 0.66
SEC13-211ENST00000431352 POLKQ9UBT6 870 aa19.19■□□□□ 0.66
SEC13-211ENST00000431352 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
SEC13-211ENST00000431352 PIGBQ92521 554 aa19.18■□□□□ 0.66
SEC13-211ENST00000431352 CHD4Q14839 1912 aa19.17■□□□□ 0.66
SEC13-211ENST00000431352 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
SEC13-211ENST00000431352 SMARCC1Q92922 1105 aaPredicted RBP19.17■□□□□ 0.66
SEC13-211ENST00000431352 AK7Q96M32 723 aa19.17■□□□□ 0.66
SEC13-211ENST00000431352 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
SEC13-211ENST00000431352 TAF1LQ8IZX4 1826 aa19.16■□□□□ 0.66
SEC13-211ENST00000431352 PHF14O94880 888 aa19.16■□□□□ 0.66
SEC13-211ENST00000431352 EIF4G2P78344 907 aaKnown RBP eCLIP19.16■□□□□ 0.66
SEC13-211ENST00000431352 EIF4A2Q14240 407 aaKnown RBP19.15■□□□□ 0.66
SEC13-211ENST00000431352 SMIM5Q71RC9 77 aa19.15■□□□□ 0.66
SEC13-211ENST00000431352 TMOD3Q9NYL9 352 aa19.15■□□□□ 0.66
SEC13-211ENST00000431352 NKX1-1Q15270 411 aaPredicted RBP19.14■□□□□ 0.65
SEC13-211ENST00000431352 AMIGO3Q86WK7 504 aa19.14■□□□□ 0.65
SEC13-211ENST00000431352 CCER1Q8TC90 406 aaPredicted RBP19.14■□□□□ 0.65
SEC13-211ENST00000431352 PHKG2P15735 406 aa19.13■□□□□ 0.65
SEC13-211ENST00000431352 FLAD1Q8NFF5 587 aa19.13■□□□□ 0.65
SEC13-211ENST00000431352 PANK3Q9H999 370 aa19.13■□□□□ 0.65
SEC13-211ENST00000431352 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
SEC13-211ENST00000431352 SIK1P57059 783 aa19.12■□□□□ 0.65
SEC13-211ENST00000431352 LINC00116Q8NCU8 138 aa19.12■□□□□ 0.65
SEC13-211ENST00000431352 YBX3P16989 372 aaKnown RBP eCLIP19.11■□□□□ 0.651e-7■□□□□ 8.2
SEC13-211ENST00000431352 IFNL2Q8IZJ0 200 aa19.11■□□□□ 0.65
SEC13-211ENST00000431352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.11■□□□□ 0.654e-7■■■□□ 17.9
SEC13-211ENST00000431352 ASAP1Q9ULH1 1129 aa19.11■□□□□ 0.65
SEC13-211ENST00000431352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.1■□□□□ 0.65
SEC13-211ENST00000431352 HMGB2P26583 209 aaKnown RBP19.1■□□□□ 0.65
SEC13-211ENST00000431352 UBR3Q6ZT12 1888 aa19.09■□□□□ 0.65
SEC13-211ENST00000431352 IGSF1Q8N6C5 1336 aa19.08■□□□□ 0.65
SEC13-211ENST00000431352 GNPATO15228 680 aa19.08■□□□□ 0.64
SEC13-211ENST00000431352 ATP6V1AP38606 617 aa19.08■□□□□ 0.64
SEC13-211ENST00000431352 ITPK1Q13572 414 aa19.08■□□□□ 0.64
SEC13-211ENST00000431352 MORC1Q86VD1 984 aa19.07■□□□□ 0.64
SEC13-211ENST00000431352 WWC3Q9ULE0 1092 aa19.07■□□□□ 0.64
SEC13-211ENST00000431352 GOLGB1Q14789 3259 aaKnown RBP19.07■□□□□ 0.64
SEC13-211ENST00000431352 ATG3Q9NT62 314 aa19.06■□□□□ 0.64
SEC13-211ENST00000431352 CD2APQ9Y5K6 639 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms