RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 MYCP01106 439 aaPredicted RBP10.62□□□□□ -0.71
PTPN4-204ENST00000431283 CDC14CA4D256 554 aa10.61□□□□□ -0.71
PTPN4-204ENST00000431283 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
PTPN4-204ENST00000431283 ABL2P42684 1182 aa10.61□□□□□ -0.71
PTPN4-204ENST00000431283 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
PTPN4-204ENST00000431283 KDF1Q8NAX2 398 aaPredicted RBP10.61□□□□□ -0.71
PTPN4-204ENST00000431283 CEP126Q9P2H0 1117 aa10.61□□□□□ -0.71
PTPN4-204ENST00000431283 A0A1W2PRU2 124 aa10.6□□□□□ -0.71
PTPN4-204ENST00000431283 ITGA6P23229 1130 aa10.6□□□□□ -0.71
PTPN4-204ENST00000431283 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
PTPN4-204ENST00000431283 SLC27A3Q5K4L6 730 aa10.6□□□□□ -0.71
PTPN4-204ENST00000431283 PRICKLE2Q7Z3G6 844 aa10.6□□□□□ -0.71
PTPN4-204ENST00000431283 GPC1P35052 558 aa10.59□□□□□ -0.71
PTPN4-204ENST00000431283 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
PTPN4-204ENST00000431283 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
PTPN4-204ENST00000431283 WASHC4Q2M389 1173 aa10.58□□□□□ -0.72
PTPN4-204ENST00000431283 SV2AQ7L0J3 742 aa10.58□□□□□ -0.72
PTPN4-204ENST00000431283 SCTRP47872 440 aa10.57□□□□□ -0.72
PTPN4-204ENST00000431283 VWA5B2Q8N398 1253 aa10.57□□□□□ -0.72
PTPN4-204ENST00000431283 NANOS1Q8WY41 292 aaKnown RBP10.57□□□□□ -0.72
PTPN4-204ENST00000431283 VAC14Q08AM6 782 aa10.56□□□□□ -0.72
PTPN4-204ENST00000431283 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
PTPN4-204ENST00000431283 ARHGEF10LQ9HCE6 1279 aa10.56□□□□□ -0.72
PTPN4-204ENST00000431283 DOLKQ9UPQ8 538 aa10.56□□□□□ -0.72
PTPN4-204ENST00000431283 RHOQP17081 205 aa10.55□□□□□ -0.72
PTPN4-204ENST00000431283 CLN3Q13286 438 aa10.55□□□□□ -0.72
PTPN4-204ENST00000431283 IRF5Q13568 498 aa10.55□□□□□ -0.72
PTPN4-204ENST00000431283 RNF135Q8IUD6 432 aa10.55□□□□□ -0.72
PTPN4-204ENST00000431283 OSBPL3Q9H4L5 887 aa10.55□□□□□ -0.72
PTPN4-204ENST00000431283 GNRH1P01148 92 aa10.54□□□□□ -0.72
PTPN4-204ENST00000431283 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
PTPN4-204ENST00000431283 SEMA3FQ13275 785 aa10.54□□□□□ -0.72
PTPN4-204ENST00000431283 MCM6Q14566 821 aa10.54□□□□□ -0.72
PTPN4-204ENST00000431283 CNTNAP3BQ96NU0 1288 aa10.54□□□□□ -0.72
PTPN4-204ENST00000431283 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
PTPN4-204ENST00000431283 CNTNAP3Q9BZ76 1288 aa10.54□□□□□ -0.72
PTPN4-204ENST00000431283 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
PTPN4-204ENST00000431283 TRAK2O60296 914 aa10.53□□□□□ -0.72
PTPN4-204ENST00000431283 USP4Q13107 963 aa10.53□□□□□ -0.72
PTPN4-204ENST00000431283 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
PTPN4-204ENST00000431283 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
PTPN4-204ENST00000431283 FOXR1Q6PIV2 292 aa10.52□□□□□ -0.73
PTPN4-204ENST00000431283 RIPOR1Q6ZS17 1223 aa10.52□□□□□ -0.73
PTPN4-204ENST00000431283 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
PTPN4-204ENST00000431283 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
PTPN4-204ENST00000431283 SOX11P35716 441 aa10.51□□□□□ -0.73
PTPN4-204ENST00000431283 POU4F2Q12837 409 aa10.51□□□□□ -0.73
PTPN4-204ENST00000431283 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
PTPN4-204ENST00000431283 CDCA7Q9BWT1 371 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-204ENST00000431283 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
PTPN4-204ENST00000431283 CNKSR1Q969H4 720 aa10.5□□□□□ -0.73
PTPN4-204ENST00000431283 RAD21O60216 631 aa10.49□□□□□ -0.73
PTPN4-204ENST00000431283 LORP23490 312 aaPredicted RBP10.49□□□□□ -0.73
PTPN4-204ENST00000431283 GMCL1Q96IK5 515 aa10.49□□□□□ -0.73
PTPN4-204ENST00000431283 GAS2L1Q99501 681 aaPredicted RBP10.49□□□□□ -0.73
PTPN4-204ENST00000431283 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
PTPN4-204ENST00000431283 DYRK1BQ9Y463 629 aa10.49□□□□□ -0.73
PTPN4-204ENST00000431283 H7C1W4 665 aa10.48□□□□□ -0.73
PTPN4-204ENST00000431283 NBPF10Q6P3W6 841 aaKnown RBP10.48□□□□□ -0.73
PTPN4-204ENST00000431283 TAS1R3Q7RTX0 852 aa10.48□□□□□ -0.73
PTPN4-204ENST00000431283 NBPF15Q8N660 670 aa10.48□□□□□ -0.73
PTPN4-204ENST00000431283 GRIP2Q9C0E4 1043 aa10.48□□□□□ -0.73
PTPN4-204ENST00000431283 TIMMDC1Q9NPL8 285 aa10.48□□□□□ -0.73
PTPN4-204ENST00000431283 KRT76Q01546 638 aa10.47□□□□□ -0.73
PTPN4-204ENST00000431283 WDR44Q5JSH3 913 aa10.47□□□□□ -0.73
PTPN4-204ENST00000431283 WASLO00401 505 aaPredicted RBP10.46□□□□□ -0.73
PTPN4-204ENST00000431283 CENPCQ03188 943 aa10.46□□□□□ -0.73
PTPN4-204ENST00000431283 MAP7D1Q3KQU3 841 aa10.46□□□□□ -0.73
PTPN4-204ENST00000431283 GNASQ5JWF2 1037 aa10.46□□□□□ -0.73
PTPN4-204ENST00000431283 TMEM214Q6NUQ4 689 aaKnown RBP10.46□□□□□ -0.73
PTPN4-204ENST00000431283 TRIM22Q8IYM9 498 aa10.46□□□□□ -0.73
PTPN4-204ENST00000431283 PHTF2Q8N3S3 785 aa10.46□□□□□ -0.73
PTPN4-204ENST00000431283 ZSCAN10Q96SZ4 725 aaPredicted RBP10.46□□□□□ -0.73
PTPN4-204ENST00000431283 SPATA31C2B4DYI2 1134 aa10.45□□□□□ -0.74
PTPN4-204ENST00000431283 FLIIQ13045 1269 aa10.45□□□□□ -0.74
PTPN4-204ENST00000431283 RNFT1Q5M7Z0 435 aa10.45□□□□□ -0.74
PTPN4-204ENST00000431283 TRERF1Q96PN7 1200 aa10.45□□□□□ -0.74
PTPN4-204ENST00000431283 COG6Q9Y2V7 657 aa10.45□□□□□ -0.74
PTPN4-204ENST00000431283 IL2RAP01589 272 aa10.44□□□□□ -0.74
PTPN4-204ENST00000431283 TSGA10IPQ3SY00 556 aa10.44□□□□□ -0.74
PTPN4-204ENST00000431283 SVOPQ8N4V2 548 aa10.44□□□□□ -0.74
PTPN4-204ENST00000431283 CUEDC1Q9NWM3 386 aaPredicted RBP10.44□□□□□ -0.74
PTPN4-204ENST00000431283 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
PTPN4-204ENST00000431283 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
PTPN4-204ENST00000431283 ZNF837Q96EG3 531 aaPredicted RBP10.43□□□□□ -0.74
PTPN4-204ENST00000431283 XAGE2Q96GT9 111 aa10.43□□□□□ -0.74
PTPN4-204ENST00000431283 F11P03951 625 aa10.42□□□□□ -0.74
PTPN4-204ENST00000431283 PHKA2P46019 1235 aa10.4□□□□□ -0.74
PTPN4-204ENST00000431283 TLR1Q15399 786 aa10.4□□□□□ -0.74
PTPN4-204ENST00000431283 DBN1Q16643 649 aa10.4□□□□□ -0.74
PTPN4-204ENST00000431283 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
PTPN4-204ENST00000431283 A0A1B0GTH6 734 aa10.39□□□□□ -0.75
PTPN4-204ENST00000431283 ADAMTS2O95450 1211 aa10.39□□□□□ -0.75
PTPN4-204ENST00000431283 SLURP2P0DP57 97 aa10.39□□□□□ -0.75
PTPN4-204ENST00000431283 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
PTPN4-204ENST00000431283 MAP3K10Q02779 954 aa10.39□□□□□ -0.75
PTPN4-204ENST00000431283 SRSF11Q05519 484 aaKnown RBP10.39□□□□□ -0.75
PTPN4-204ENST00000431283 PGBD3Q8N328 593 aa10.39□□□□□ -0.75
PTPN4-204ENST00000431283 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
PTPN4-204ENST00000431283 NUCKS1Q9H1E3 243 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms