RNA–Protein interactions for RNA: ENST00000431243.6

MTHFR-209, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 1,116 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-209ENST00000431243 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
MTHFR-209ENST00000431243 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
MTHFR-209ENST00000431243 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
MTHFR-209ENST00000431243 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
MTHFR-209ENST00000431243 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
MTHFR-209ENST00000431243 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.24
MTHFR-209ENST00000431243 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
MTHFR-209ENST00000431243 COG3Q96JB2 828 aa13.57□□□□□ -0.24
MTHFR-209ENST00000431243 HOXC9P31274 260 aa13.56□□□□□ -0.24
MTHFR-209ENST00000431243 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
MTHFR-209ENST00000431243 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
MTHFR-209ENST00000431243 NSD2O96028 1365 aa13.56□□□□□ -0.24
MTHFR-209ENST00000431243 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
MTHFR-209ENST00000431243 GRIN3BO60391 1043 aa13.55□□□□□ -0.24
MTHFR-209ENST00000431243 AMPHP49418 695 aa13.55□□□□□ -0.24
MTHFR-209ENST00000431243 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
MTHFR-209ENST00000431243 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
MTHFR-209ENST00000431243 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
MTHFR-209ENST00000431243 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
MTHFR-209ENST00000431243 TESK2Q96S53 571 aa13.54□□□□□ -0.24
MTHFR-209ENST00000431243 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
MTHFR-209ENST00000431243 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
MTHFR-209ENST00000431243 USP47Q96K76 1375 aa13.53□□□□□ -0.24
MTHFR-209ENST00000431243 LY75O60449 1722 aa13.53□□□□□ -0.24
MTHFR-209ENST00000431243 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.25
MTHFR-209ENST00000431243 KCNQ4P56696 695 aa13.51□□□□□ -0.25
MTHFR-209ENST00000431243 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
MTHFR-209ENST00000431243 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
MTHFR-209ENST00000431243 MEGF6O75095 1541 aa13.5□□□□□ -0.25
MTHFR-209ENST00000431243 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
MTHFR-209ENST00000431243 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
MTHFR-209ENST00000431243 NBPF6Q5VWK0 638 aa13.5□□□□□ -0.25
MTHFR-209ENST00000431243 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
MTHFR-209ENST00000431243 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
MTHFR-209ENST00000431243 NBPF4Q96M43 638 aa13.5□□□□□ -0.25
MTHFR-209ENST00000431243 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
MTHFR-209ENST00000431243 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
MTHFR-209ENST00000431243 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
MTHFR-209ENST00000431243 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
MTHFR-209ENST00000431243 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
MTHFR-209ENST00000431243 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
MTHFR-209ENST00000431243 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
MTHFR-209ENST00000431243 FYB1O15117 783 aa13.48□□□□□ -0.25
MTHFR-209ENST00000431243 MSH5O43196 834 aa13.48□□□□□ -0.25
MTHFR-209ENST00000431243 TATP17735 454 aaPredicted RBP13.48□□□□□ -0.25
MTHFR-209ENST00000431243 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
MTHFR-209ENST00000431243 SHANK3Q9BYB0 1731 aa13.47□□□□□ -0.25
MTHFR-209ENST00000431243 INSRP06213 1382 aa13.47□□□□□ -0.25
MTHFR-209ENST00000431243 ZBTB22O15209 634 aa13.47□□□□□ -0.25
MTHFR-209ENST00000431243 YBX3P16989 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
MTHFR-209ENST00000431243 FBLN1P23142 703 aa13.47□□□□□ -0.25
MTHFR-209ENST00000431243 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
MTHFR-209ENST00000431243 SMARCC1Q92922 1105 aaPredicted RBP13.46□□□□□ -0.25
MTHFR-209ENST00000431243 TMF1P82094 1093 aa13.45□□□□□ -0.26
MTHFR-209ENST00000431243 FLT4P35916 1363 aa13.45□□□□□ -0.26
MTHFR-209ENST00000431243 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
MTHFR-209ENST00000431243 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
MTHFR-209ENST00000431243 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
MTHFR-209ENST00000431243 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
MTHFR-209ENST00000431243 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
MTHFR-209ENST00000431243 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
MTHFR-209ENST00000431243 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
MTHFR-209ENST00000431243 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
MTHFR-209ENST00000431243 USHBP1Q8N6Y0 703 aa13.43□□□□□ -0.26
MTHFR-209ENST00000431243 CYP27B1O15528 508 aa13.42□□□□□ -0.26
MTHFR-209ENST00000431243 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
MTHFR-209ENST00000431243 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
MTHFR-209ENST00000431243 C5P01031 1676 aa13.42□□□□□ -0.26
MTHFR-209ENST00000431243 ATP10DQ9P241 1426 aa13.41□□□□□ -0.26
MTHFR-209ENST00000431243 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
MTHFR-209ENST00000431243 AK7Q96M32 723 aa13.41□□□□□ -0.26
MTHFR-209ENST00000431243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
MTHFR-209ENST00000431243 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
MTHFR-209ENST00000431243 CEP350Q5VT06 3117 aa13.4□□□□□ -0.26
MTHFR-209ENST00000431243 SSFA2P28290 1259 aa13.4□□□□□ -0.26
MTHFR-209ENST00000431243 GPBP1L1Q9HC44 474 aaPredicted RBP13.4□□□□□ -0.26
MTHFR-209ENST00000431243 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
MTHFR-209ENST00000431243 ADCY9O60503 1353 aa13.4□□□□□ -0.26
MTHFR-209ENST00000431243 PIGBQ92521 554 aa13.39□□□□□ -0.27
MTHFR-209ENST00000431243 POLR3GLQ9BT43 218 aa13.39□□□□□ -0.27
MTHFR-209ENST00000431243 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
MTHFR-209ENST00000431243 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
MTHFR-209ENST00000431243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
MTHFR-209ENST00000431243 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
MTHFR-209ENST00000431243 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
MTHFR-209ENST00000431243 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
MTHFR-209ENST00000431243 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
MTHFR-209ENST00000431243 SIK1P57059 783 aa13.37□□□□□ -0.27
MTHFR-209ENST00000431243 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
MTHFR-209ENST00000431243 HSPA6P17066 643 aa13.36□□□□□ -0.27
MTHFR-209ENST00000431243 CARD14Q9BXL6 1004 aa13.36□□□□□ -0.27
MTHFR-209ENST00000431243 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
MTHFR-209ENST00000431243 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
MTHFR-209ENST00000431243 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
MTHFR-209ENST00000431243 AMIGO3Q86WK7 504 aa13.35□□□□□ -0.27
MTHFR-209ENST00000431243 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
MTHFR-209ENST00000431243 ITGB4P16144 1822 aa13.34□□□□□ -0.27
MTHFR-209ENST00000431243 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
MTHFR-209ENST00000431243 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
MTHFR-209ENST00000431243 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms