RNA–Protein interactions for RNA: ENST00000431016.5

PCYT1A-206, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 1,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-206ENST00000431016 U2AF1Q01081 240 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCYT1A-206ENST00000431016 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
PCYT1A-206ENST00000431016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.22e-7■■■■□ 25.2
PCYT1A-206ENST00000431016 SPG7Q9UQ90 795 aa16.33■□□□□ 0.2
PCYT1A-206ENST00000431016 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
PCYT1A-206ENST00000431016 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
PCYT1A-206ENST00000431016 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
PCYT1A-206ENST00000431016 MARCH10Q8NA82 808 aaPredicted RBP16.31■□□□□ 0.2
PCYT1A-206ENST00000431016 WNK3Q9BYP7 1800 aa16.31■□□□□ 0.2
PCYT1A-206ENST00000431016 LRRC37A3O60309 1634 aa16.3■□□□□ 0.2
PCYT1A-206ENST00000431016 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
PCYT1A-206ENST00000431016 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
PCYT1A-206ENST00000431016 FCHSD2O94868 740 aa16.3■□□□□ 0.2
PCYT1A-206ENST00000431016 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
PCYT1A-206ENST00000431016 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
PCYT1A-206ENST00000431016 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
PCYT1A-206ENST00000431016 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
PCYT1A-206ENST00000431016 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
PCYT1A-206ENST00000431016 PRKAR2BP31323 418 aa16.27■□□□□ 0.19
PCYT1A-206ENST00000431016 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.19
PCYT1A-206ENST00000431016 RSPH6AQ9H0K4 717 aa16.27■□□□□ 0.19
PCYT1A-206ENST00000431016 BCL9O00512 1426 aa16.27■□□□□ 0.19
PCYT1A-206ENST00000431016 CYP27B1O15528 508 aa16.26■□□□□ 0.19
PCYT1A-206ENST00000431016 NEFMP07197 916 aa16.26■□□□□ 0.19
PCYT1A-206ENST00000431016 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
PCYT1A-206ENST00000431016 IFNL2Q8IZJ0 200 aa16.26■□□□□ 0.19
PCYT1A-206ENST00000431016 SOCS7O14512 581 aa16.25■□□□□ 0.19
PCYT1A-206ENST00000431016 ZNF530Q6P9A1 599 aaPredicted RBP16.25■□□□□ 0.19
PCYT1A-206ENST00000431016 MRS2Q9HD23 443 aa16.25■□□□□ 0.19
PCYT1A-206ENST00000431016 PHKG2P15735 406 aa16.24■□□□□ 0.19
PCYT1A-206ENST00000431016 C1orf141Q5JVX7 400 aa16.24■□□□□ 0.19
PCYT1A-206ENST00000431016 UPF1Q92900 1129 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCYT1A-206ENST00000431016 TRIM37O94972 964 aa16.23■□□□□ 0.19
PCYT1A-206ENST00000431016 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
PCYT1A-206ENST00000431016 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
PCYT1A-206ENST00000431016 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
PCYT1A-206ENST00000431016 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
PCYT1A-206ENST00000431016 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
PCYT1A-206ENST00000431016 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
PCYT1A-206ENST00000431016 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
PCYT1A-206ENST00000431016 PHACTR3Q96KR7 559 aa16.22■□□□□ 0.19
PCYT1A-206ENST00000431016 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
PCYT1A-206ENST00000431016 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
PCYT1A-206ENST00000431016 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.19
PCYT1A-206ENST00000431016 ACSBG1Q96GR2 724 aa16.21■□□□□ 0.19
PCYT1A-206ENST00000431016 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
PCYT1A-206ENST00000431016 MAPK8IP3Q9UPT6 1336 aa16.2■□□□□ 0.18
PCYT1A-206ENST00000431016 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
PCYT1A-206ENST00000431016 PRIM1P49642 420 aaKnown RBP16.19■□□□□ 0.18
PCYT1A-206ENST00000431016 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
PCYT1A-206ENST00000431016 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
PCYT1A-206ENST00000431016 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
PCYT1A-206ENST00000431016 KCNQ2O43526 872 aa16.18■□□□□ 0.18
PCYT1A-206ENST00000431016 GNAT3A8MTJ3 354 aa16.17■□□□□ 0.18
PCYT1A-206ENST00000431016 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
PCYT1A-206ENST00000431016 APBA3O96018 575 aa16.17■□□□□ 0.18
PCYT1A-206ENST00000431016 ERVV-2B6SEH9 535 aa16.16■□□□□ 0.18
PCYT1A-206ENST00000431016 BAG6P46379 1132 aa16.16■□□□□ 0.18
PCYT1A-206ENST00000431016 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
PCYT1A-206ENST00000431016 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
PCYT1A-206ENST00000431016 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
PCYT1A-206ENST00000431016 EP400Q96L91 3159 aa16.16■□□□□ 0.18
PCYT1A-206ENST00000431016 MAP3K5Q99683 1374 aa16.15■□□□□ 0.18
PCYT1A-206ENST00000431016 PTF1AQ7RTS3 328 aa16.15■□□□□ 0.18
PCYT1A-206ENST00000431016 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
PCYT1A-206ENST00000431016 TMOD3Q9NYL9 352 aa16.15■□□□□ 0.18
PCYT1A-206ENST00000431016 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
PCYT1A-206ENST00000431016 HTATSF1O43719 755 aaKnown RBP16.14■□□□□ 0.17
PCYT1A-206ENST00000431016 CABP4P57796 275 aa16.14■□□□□ 0.17
PCYT1A-206ENST00000431016 NFE2L2Q16236 605 aa16.14■□□□□ 0.17
PCYT1A-206ENST00000431016 MIER1Q8N108 512 aa16.14■□□□□ 0.17
PCYT1A-206ENST00000431016 LGR6Q9HBX8 967 aa16.13■□□□□ 0.17
PCYT1A-206ENST00000431016 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
PCYT1A-206ENST00000431016 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
PCYT1A-206ENST00000431016 PLSCR1O15162 318 aa16.12■□□□□ 0.17
PCYT1A-206ENST00000431016 PIGBQ92521 554 aa16.12■□□□□ 0.17
PCYT1A-206ENST00000431016 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
PCYT1A-206ENST00000431016 DEFB132Q7Z7B7 95 aa16.11■□□□□ 0.17
PCYT1A-206ENST00000431016 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
PCYT1A-206ENST00000431016 SBF2Q86WG5 1849 aa16.11■□□□□ 0.17
PCYT1A-206ENST00000431016 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
PCYT1A-206ENST00000431016 TMPOP42166 694 aaKnown RBP16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 RIPK4P57078 832 aa16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 SLC52A2Q9HAB3 445 aa16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 TEFQ10587 303 aa16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 SMARCC1Q92922 1105 aaPredicted RBP16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 CAMKK2Q96RR4 588 aa16.1■□□□□ 0.17
PCYT1A-206ENST00000431016 DOT1LQ8TEK3 1739 aa16.09■□□□□ 0.17
PCYT1A-206ENST00000431016 NEUROD2Q15784 382 aa16.09■□□□□ 0.17
PCYT1A-206ENST00000431016 CEMIPQ8WUJ3 1361 aa16.08■□□□□ 0.16
PCYT1A-206ENST00000431016 APAF1O14727 1248 aa16.08■□□□□ 0.16
PCYT1A-206ENST00000431016 MCM10Q7L590 875 aa16.08■□□□□ 0.16
PCYT1A-206ENST00000431016 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
PCYT1A-206ENST00000431016 TNS1Q9HBL0 1735 aaKnown RBP16.08■□□□□ 0.16
PCYT1A-206ENST00000431016 EZH2Q15910 746 aaKnown RBP16.07■□□□□ 0.16
PCYT1A-206ENST00000431016 TOGARAM1Q9Y4F4 1720 aa16.06■□□□□ 0.16
PCYT1A-206ENST00000431016 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms