RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 AKT1S1Q96B36 256 aa20.96■□□□□ 0.95
PTCD1-204ENST00000430982 ERBB3P21860 1342 aa20.96■□□□□ 0.95
PTCD1-204ENST00000430982 GIGYF1O75420 1035 aaPredicted RBP20.95■□□□□ 0.94
PTCD1-204ENST00000430982 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
PTCD1-204ENST00000430982 ACSBG1Q96GR2 724 aa20.95■□□□□ 0.94
PTCD1-204ENST00000430982 KIF7Q2M1P5 1343 aa20.95■□□□□ 0.94
PTCD1-204ENST00000430982 PANK3Q9H999 370 aa20.94■□□□□ 0.94
PTCD1-204ENST00000430982 TUBGCP6Q96RT7 1819 aa20.94■□□□□ 0.94
PTCD1-204ENST00000430982 GPR162Q16538 588 aa20.93■□□□□ 0.94
PTCD1-204ENST00000430982 IL2RBP14784 551 aa20.91■□□□□ 0.94
PTCD1-204ENST00000430982 FBLN1P23142 703 aa20.91■□□□□ 0.94
PTCD1-204ENST00000430982 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
PTCD1-204ENST00000430982 PNPLA7Q6ZV29 1317 aa20.91■□□□□ 0.94
PTCD1-204ENST00000430982 LTN1O94822 1766 aa20.9■□□□□ 0.94
PTCD1-204ENST00000430982 SLC27A3Q5K4L6 730 aa20.89■□□□□ 0.93
PTCD1-204ENST00000430982 MAP3K19Q56UN5 1328 aa20.87■□□□□ 0.93
PTCD1-204ENST00000430982 AMPHP49418 695 aa20.87■□□□□ 0.93
PTCD1-204ENST00000430982 KIF20BQ96Q89 1820 aa20.87■□□□□ 0.93
PTCD1-204ENST00000430982 LY75O60449 1722 aa20.87■□□□□ 0.93
PTCD1-204ENST00000430982 POLD1P28340 1107 aa20.86■□□□□ 0.93
PTCD1-204ENST00000430982 RRS1Q15050 365 aaKnown RBP20.86■□□□□ 0.93
PTCD1-204ENST00000430982 NLGN2Q8NFZ4 835 aa20.86■□□□□ 0.93
PTCD1-204ENST00000430982 IP6K1Q92551 441 aa20.86■□□□□ 0.93
PTCD1-204ENST00000430982 ANKRD24Q8TF21 1146 aa20.85■□□□□ 0.93
PTCD1-204ENST00000430982 NLRP2Q9NX02 1062 aa20.85■□□□□ 0.93
PTCD1-204ENST00000430982 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
PTCD1-204ENST00000430982 LTV1Q96GA3 475 aaPredicted RBP20.84■□□□□ 0.93
PTCD1-204ENST00000430982 FAM208AQ9UK61 1670 aaKnown RBP20.83■□□□□ 0.93
PTCD1-204ENST00000430982 YBX3P16989 372 aaKnown RBP eCLIP20.83■□□□□ 0.934e-17■□□□□ 8.8
PTCD1-204ENST00000430982 HOXC9P31274 260 aa20.83■□□□□ 0.93
PTCD1-204ENST00000430982 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.93
PTCD1-204ENST00000430982 NSD2O96028 1365 aa20.83■□□□□ 0.92
PTCD1-204ENST00000430982 DOT1LQ8TEK3 1739 aa20.81■□□□□ 0.92
PTCD1-204ENST00000430982 GRIN3BO60391 1043 aa20.8■□□□□ 0.92
PTCD1-204ENST00000430982 TNNT2P45379 298 aaPredicted RBP20.8■□□□□ 0.92
PTCD1-204ENST00000430982 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
PTCD1-204ENST00000430982 KAT6BQ8WYB5 2073 aa20.8■□□□□ 0.92
PTCD1-204ENST00000430982 RTL1A6NKG5 1358 aa20.8■□□□□ 0.92
PTCD1-204ENST00000430982 ADCY9O60503 1353 aa20.79■□□□□ 0.92
PTCD1-204ENST00000430982 ATP10DQ9P241 1426 aa20.78■□□□□ 0.92
PTCD1-204ENST00000430982 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
PTCD1-204ENST00000430982 TFCP2L1Q9NZI6 479 aa20.78■□□□□ 0.92
PTCD1-204ENST00000430982 EMILIN1Q9Y6C2 1016 aa20.78■□□□□ 0.92
PTCD1-204ENST00000430982 PPM1GO15355 546 aaPredicted RBP20.77■□□□□ 0.92
PTCD1-204ENST00000430982 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
PTCD1-204ENST00000430982 FLT4P35916 1363 aa20.75■□□□□ 0.91
PTCD1-204ENST00000430982 ZEB1P37275 1124 aaPredicted RBP20.75■□□□□ 0.91
PTCD1-204ENST00000430982 KCNQ4P56696 695 aa20.75■□□□□ 0.91
PTCD1-204ENST00000430982 HSP90AB2PQ58FF8 381 aa20.75■□□□□ 0.91
PTCD1-204ENST00000430982 AMER1Q5JTC6 1135 aaPredicted RBP20.74■□□□□ 0.91
PTCD1-204ENST00000430982 KIF24Q5T7B8 1368 aa20.73■□□□□ 0.91
PTCD1-204ENST00000430982 INSRP06213 1382 aa20.72■□□□□ 0.91
PTCD1-204ENST00000430982 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
PTCD1-204ENST00000430982 PER1O15534 1290 aaPredicted RBP20.72■□□□□ 0.91
PTCD1-204ENST00000430982 PRIM1P49642 420 aaKnown RBP20.72■□□□□ 0.91
PTCD1-204ENST00000430982 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
PTCD1-204ENST00000430982 POLKQ9UBT6 870 aa20.72■□□□□ 0.91
PTCD1-204ENST00000430982 ANKRD26Q9UPS8 1709 aa20.71■□□□□ 0.91
PTCD1-204ENST00000430982 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
PTCD1-204ENST00000430982 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
PTCD1-204ENST00000430982 C5P01031 1676 aa20.7■□□□□ 0.91
PTCD1-204ENST00000430982 MEGF6O75095 1541 aa20.7■□□□□ 0.9
PTCD1-204ENST00000430982 HSPA6P17066 643 aa20.7■□□□□ 0.9
PTCD1-204ENST00000430982 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
PTCD1-204ENST00000430982 CCNL1Q9UK58 526 aaPredicted RBP20.69■□□□□ 0.9
PTCD1-204ENST00000430982 CD2APQ9Y5K6 639 aa20.69■□□□□ 0.9
PTCD1-204ENST00000430982 NBPF6Q5VWK0 638 aa20.68■□□□□ 0.9
PTCD1-204ENST00000430982 USHBP1Q8N6Y0 703 aa20.68■□□□□ 0.9
PTCD1-204ENST00000430982 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
PTCD1-204ENST00000430982 NBPF4Q96M43 638 aa20.68■□□□□ 0.9
PTCD1-204ENST00000430982 RGPD2P0DJD1 1756 aa20.67■□□□□ 0.9
PTCD1-204ENST00000430982 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
PTCD1-204ENST00000430982 GPBP1L1Q9HC44 474 aaPredicted RBP20.67■□□□□ 0.9
PTCD1-204ENST00000430982 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.9
PTCD1-204ENST00000430982 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
PTCD1-204ENST00000430982 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
PTCD1-204ENST00000430982 CICQ96RK0 1608 aaPredicted RBP20.63■□□□□ 0.89
PTCD1-204ENST00000430982 MAP2P11137 1827 aaKnown RBP20.62■□□□□ 0.89
PTCD1-204ENST00000430982 NPC1L1Q9UHC9 1359 aa20.62■□□□□ 0.89
PTCD1-204ENST00000430982 EIF4A2Q14240 407 aaKnown RBP20.61■□□□□ 0.89
PTCD1-204ENST00000430982 RAPGEF4Q8WZA2 1011 aa20.61■□□□□ 0.89
PTCD1-204ENST00000430982 MSH5O43196 834 aa20.6■□□□□ 0.89
PTCD1-204ENST00000430982 TATP17735 454 aaPredicted RBP20.6■□□□□ 0.89
PTCD1-204ENST00000430982 FLAD1Q8NFF5 587 aa20.6■□□□□ 0.89
PTCD1-204ENST00000430982 C4BP0C0L5 1744 aa20.6■□□□□ 0.89
PTCD1-204ENST00000430982 EYA1Q99502 592 aa20.59■□□□□ 0.89
PTCD1-204ENST00000430982 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.89
PTCD1-204ENST00000430982 KIF3CO14782 793 aa20.58■□□□□ 0.89
PTCD1-204ENST00000430982 HMGB2P26583 209 aaKnown RBP20.57■□□□□ 0.88
PTCD1-204ENST00000430982 MTHFSP49914 203 aa20.57■□□□□ 0.88
PTCD1-204ENST00000430982 PALLDQ8WX93 1383 aa20.57■□□□□ 0.88
PTCD1-204ENST00000430982 IGSF1Q8N6C5 1336 aa20.55■□□□□ 0.88
PTCD1-204ENST00000430982 AMIGO3Q86WK7 504 aa20.55■□□□□ 0.88
PTCD1-204ENST00000430982 ZNF526Q8TF50 670 aaPredicted RBP20.55■□□□□ 0.88
PTCD1-204ENST00000430982 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
PTCD1-204ENST00000430982 ITGB4P16144 1822 aa20.53■□□□□ 0.88
PTCD1-204ENST00000430982 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
PTCD1-204ENST00000430982 KIAA1551Q9HCM1 1747 aa20.52■□□□□ 0.88
PTCD1-204ENST00000430982 KIF13BQ9NQT8 1826 aa20.51■□□□□ 0.87
PTCD1-204ENST00000430982 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms