RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RBM6P78332 1123 aaKnown RBP14.62□□□□□ -0.07
CHD4-202ENST00000430771 PNISRQ8TF01 805 aaKnown RBP14.62□□□□□ -0.07
CHD4-202ENST00000430771 RSPH6AQ9H0K4 717 aa14.62□□□□□ -0.07
CHD4-202ENST00000430771 MAPK8IP3Q9UPT6 1336 aa14.62□□□□□ -0.07
CHD4-202ENST00000430771 PRKAR2BP31323 418 aa14.61□□□□□ -0.07
CHD4-202ENST00000430771 A0A0G2JS52 829 aa14.6□□□□□ -0.07
CHD4-202ENST00000430771 MYT1Q01538 1121 aa14.6□□□□□ -0.07
CHD4-202ENST00000430771 FAM98CQ17RN3 349 aaKnown RBP14.6□□□□□ -0.07
CHD4-202ENST00000430771 FAM9BQ8IZU0 186 aa14.59□□□□□ -0.07
CHD4-202ENST00000430771 ADAMTS8Q9UP79 889 aa14.59□□□□□ -0.07
CHD4-202ENST00000430771 PCDH11XQ9BZA7 1347 aa14.59□□□□□ -0.07
CHD4-202ENST00000430771 PCDH11YQ9BZA8 1340 aa14.59□□□□□ -0.07
CHD4-202ENST00000430771 RGS12O14924 1447 aa14.58□□□□□ -0.07
CHD4-202ENST00000430771 RXRBP28702 533 aa14.58□□□□□ -0.08
CHD4-202ENST00000430771 AMOTQ4VCS5 1084 aa14.58□□□□□ -0.08
CHD4-202ENST00000430771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.58□□□□□ -0.081e-13■■■■□ 20.9
CHD4-202ENST00000430771 DDB1Q16531 1140 aa14.57□□□□□ -0.08
CHD4-202ENST00000430771 PLEKHO1Q53GL0 409 aaPredicted RBP14.57□□□□□ -0.08
CHD4-202ENST00000430771 GAS2L2Q8NHY3 880 aa14.57□□□□□ -0.08
CHD4-202ENST00000430771 RUNDC1Q96C34 613 aa14.57□□□□□ -0.08
CHD4-202ENST00000430771 SPG7Q9UQ90 795 aa14.57□□□□□ -0.08
CHD4-202ENST00000430771 POTEAQ6S8J7 498 aa14.56□□□□□ -0.08
CHD4-202ENST00000430771 BRWD3Q6RI45 1802 aa14.56□□□□□ -0.08
CHD4-202ENST00000430771 DLG5Q8TDM6 1919 aa14.56□□□□□ -0.08
CHD4-202ENST00000430771 VIRMAQ69YN4 1812 aaKnown RBP14.55□□□□□ -0.08
CHD4-202ENST00000430771 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
CHD4-202ENST00000430771 ZCRB1Q8TBF4 217 aaKnown RBP14.55□□□□□ -0.08
CHD4-202ENST00000430771 PLEKHF1Q96S99 279 aa14.55□□□□□ -0.08
CHD4-202ENST00000430771 EXOC5O00471 708 aa14.54□□□□□ -0.08
CHD4-202ENST00000430771 ONECUT3O60422 494 aaPredicted RBP14.54□□□□□ -0.08
CHD4-202ENST00000430771 ZNF530Q6P9A1 599 aaPredicted RBP14.54□□□□□ -0.08
CHD4-202ENST00000430771 SEPT12Q8IYM1 358 aa14.54□□□□□ -0.08
CHD4-202ENST00000430771 DOT1LQ8TEK3 1739 aa14.53□□□□□ -0.08
CHD4-202ENST00000430771 MAP3K5Q99683 1374 aa14.53□□□□□ -0.08
CHD4-202ENST00000430771 C1orf141Q5JVX7 400 aa14.53□□□□□ -0.08
CHD4-202ENST00000430771 SCN11AQ9UI33 1791 aa14.52□□□□□ -0.08
CHD4-202ENST00000430771 ADAMTS7Q9UKP4 1686 aa14.52□□□□□ -0.08
CHD4-202ENST00000430771 PDE3BQ13370 1112 aa14.52□□□□□ -0.09
CHD4-202ENST00000430771 HSP90AB1P08238 724 aaKnown RBP14.51□□□□□ -0.09
CHD4-202ENST00000430771 LMOD3Q0VAK6 560 aa14.51□□□□□ -0.09
CHD4-202ENST00000430771 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
CHD4-202ENST00000430771 MTHFSDQ2M296 383 aaKnown RBP14.51□□□□□ -0.09
CHD4-202ENST00000430771 IFNL2Q8IZJ0 200 aa14.51□□□□□ -0.09
CHD4-202ENST00000430771 PHACTR3Q96KR7 559 aa14.51□□□□□ -0.09
CHD4-202ENST00000430771 TOGARAM1Q9Y4F4 1720 aa14.51□□□□□ -0.09
CHD4-202ENST00000430771 PHKG2P15735 406 aa14.5□□□□□ -0.09
CHD4-202ENST00000430771 AKAP4Q5JQC9 854 aa14.5□□□□□ -0.09
CHD4-202ENST00000430771 NHSQ6T4R5 1651 aa14.49□□□□□ -0.09
CHD4-202ENST00000430771 KRT27Q7Z3Y8 459 aa14.49□□□□□ -0.09
CHD4-202ENST00000430771 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
CHD4-202ENST00000430771 DDX54Q8TDD1 881 aaKnown RBP14.49□□□□□ -0.09
CHD4-202ENST00000430771 MRC1P22897 1456 aa14.49□□□□□ -0.09
CHD4-202ENST00000430771 BCL9O00512 1426 aa14.49□□□□□ -0.09
CHD4-202ENST00000430771 GNAT3A8MTJ3 354 aa14.48□□□□□ -0.09
CHD4-202ENST00000430771 APAF1O14727 1248 aa14.48□□□□□ -0.09
CHD4-202ENST00000430771 CYP27B1O15528 508 aa14.48□□□□□ -0.09
CHD4-202ENST00000430771 TMPOP42166 694 aaKnown RBP14.48□□□□□ -0.09
CHD4-202ENST00000430771 RTF1Q92541 710 aaKnown RBP14.48□□□□□ -0.09
CHD4-202ENST00000430771 KDM6AO15550 1401 aaPredicted RBP14.48□□□□□ -0.09
CHD4-202ENST00000430771 HTATSF1O43719 755 aaKnown RBP14.47□□□□□ -0.09
CHD4-202ENST00000430771 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
CHD4-202ENST00000430771 SBF2Q86WG5 1849 aa14.46□□□□□ -0.09
CHD4-202ENST00000430771 RIPK4P57078 832 aa14.46□□□□□ -0.09
CHD4-202ENST00000430771 ILDR2Q71H61 639 aa14.46□□□□□ -0.09
CHD4-202ENST00000430771 MARCH10Q8NA82 808 aaPredicted RBP14.46□□□□□ -0.09
CHD4-202ENST00000430771 DCAF5Q96JK2 942 aa14.46□□□□□ -0.09
CHD4-202ENST00000430771 RRP7AQ9Y3A4 280 aaKnown RBP14.46□□□□□ -0.09
CHD4-202ENST00000430771 SIPA1L3O60292 1781 aaPredicted RBP14.46□□□□□ -0.09
CHD4-202ENST00000430771 ITGB4P16144 1822 aa14.45□□□□□ -0.1
CHD4-202ENST00000430771 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
CHD4-202ENST00000430771 NEUROD2Q15784 382 aa14.45□□□□□ -0.1
CHD4-202ENST00000430771 CCDC27Q2M243 656 aa14.44□□□□□ -0.1
CHD4-202ENST00000430771 CEMIPQ8WUJ3 1361 aa14.44□□□□□ -0.1
CHD4-202ENST00000430771 RNMTO43148 476 aaKnown RBP14.43□□□□□ -0.1
CHD4-202ENST00000430771 HNRNPUQ00839 825 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHD4-202ENST00000430771 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
CHD4-202ENST00000430771 MPRIPQ6WCQ1 1025 aa14.43□□□□□ -0.1
CHD4-202ENST00000430771 FAM196AQ6ZSG2 479 aa14.43□□□□□ -0.1
CHD4-202ENST00000430771 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
CHD4-202ENST00000430771 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
CHD4-202ENST00000430771 BTAF1O14981 1849 aa14.41□□□□□ -0.1
CHD4-202ENST00000430771 ERVV-2B6SEH9 535 aa14.41□□□□□ -0.1
CHD4-202ENST00000430771 TEFQ10587 303 aa14.41□□□□□ -0.1
CHD4-202ENST00000430771 KDM3BQ7LBC6 1761 aa14.41□□□□□ -0.1
CHD4-202ENST00000430771 KAT6BQ8WYB5 2073 aa14.4□□□□□ -0.1
CHD4-202ENST00000430771 MCM10Q7L590 875 aa14.4□□□□□ -0.1
CHD4-202ENST00000430771 TMOD3Q9NYL9 352 aa14.4□□□□□ -0.1
CHD4-202ENST00000430771 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
CHD4-202ENST00000430771 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
CHD4-202ENST00000430771 CABP4P57796 275 aa14.39□□□□□ -0.11
CHD4-202ENST00000430771 DCTN1Q14203 1278 aa14.39□□□□□ -0.11
CHD4-202ENST00000430771 SLC52A2Q9HAB3 445 aa14.39□□□□□ -0.11
CHD4-202ENST00000430771 RGPD3A6NKT7 1758 aaPredicted RBP14.39□□□□□ -0.11
CHD4-202ENST00000430771 RGPD4Q7Z3J3 1758 aa14.39□□□□□ -0.11
CHD4-202ENST00000430771 UBR2Q8IWV8 1755 aa14.38□□□□□ -0.11
CHD4-202ENST00000430771 FAM182BQ5T319 152 aa14.38□□□□□ -0.11
CHD4-202ENST00000430771 WWC1Q8IX03 1113 aa14.38□□□□□ -0.11
CHD4-202ENST00000430771 IL17REQ8NFR9 667 aa14.38□□□□□ -0.11
CHD4-202ENST00000430771 SYTL4Q96C24 671 aaPredicted RBP14.38□□□□□ -0.11
CHD4-202ENST00000430771 ACSBG1Q96GR2 724 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms