RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 DPY19L2Q6NUT2 758 aa9.28□□□□□ -0.92
SMC6-205ENST00000430591 POLR3GLQ9BT43 218 aa9.28□□□□□ -0.92
SMC6-205ENST00000430591 TIMELESSQ9UNS1 1208 aa9.28□□□□□ -0.92
SMC6-205ENST00000430591 AXIN2Q9Y2T1 843 aa9.28□□□□□ -0.92
SMC6-205ENST00000430591 CCDC9Q9Y3X0 531 aaKnown RBP9.28□□□□□ -0.92
SMC6-205ENST00000430591 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
SMC6-205ENST00000430591 EP400Q96L91 3159 aa9.27□□□□□ -0.93
SMC6-205ENST00000430591 VPS72Q15906 364 aa9.27□□□□□ -0.93
SMC6-205ENST00000430591 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
SMC6-205ENST00000430591 LARP1Q6PKG0 1096 aaKnown RBP9.27□□□□□ -0.93
SMC6-205ENST00000430591 NLRP13Q86W25 1043 aa9.27□□□□□ -0.93
SMC6-205ENST00000430591 CARD14Q9BXL6 1004 aa9.27□□□□□ -0.93
SMC6-205ENST00000430591 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
SMC6-205ENST00000430591 KIF20BQ96Q89 1820 aa9.26□□□□□ -0.93
SMC6-205ENST00000430591 THSD7AQ9UPZ6 1657 aa9.26□□□□□ -0.93
SMC6-205ENST00000430591 OVOS2A0A0J9YW53 1432 aa9.26□□□□□ -0.93
SMC6-205ENST00000430591 OVOS2Q6IE36 1432 aa9.26□□□□□ -0.93
SMC6-205ENST00000430591 EDC4Q6P2E9 1401 aaKnown RBP9.26□□□□□ -0.93
SMC6-205ENST00000430591 TMF1P82094 1093 aa9.26□□□□□ -0.93
SMC6-205ENST00000430591 UPF1Q92900 1129 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC6-205ENST00000430591 USP35Q9P2H5 1018 aa9.26□□□□□ -0.93
SMC6-205ENST00000430591 CPDO75976 1380 aa9.25□□□□□ -0.93
SMC6-205ENST00000430591 SEPT12Q8IYM1 358 aa9.25□□□□□ -0.93
SMC6-205ENST00000430591 BCL11BQ9C0K0 894 aaPredicted RBP9.25□□□□□ -0.93
SMC6-205ENST00000430591 COL5A2P05997 1499 aaPredicted RBP9.25□□□□□ -0.93
SMC6-205ENST00000430591 SPATA31A5Q5VU36 1347 aa9.25□□□□□ -0.93
SMC6-205ENST00000430591 SPATA31A7Q8IWB4 1347 aa9.25□□□□□ -0.93
SMC6-205ENST00000430591 TTC21AQ8NDW8 1320 aa9.25□□□□□ -0.93
SMC6-205ENST00000430591 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
SMC6-205ENST00000430591 WNK3Q9BYP7 1800 aa9.24□□□□□ -0.93
SMC6-205ENST00000430591 EIF4G2P78344 907 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMC6-205ENST00000430591 HDGFL2Q7Z4V5 671 aaPredicted RBP9.24□□□□□ -0.93
SMC6-205ENST00000430591 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
SMC6-205ENST00000430591 PEAK1Q9H792 1746 aa9.24□□□□□ -0.93
SMC6-205ENST00000430591 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
SMC6-205ENST00000430591 USP31Q70CQ4 1352 aa9.24□□□□□ -0.93
SMC6-205ENST00000430591 NSD3Q9BZ95 1437 aa9.23□□□□□ -0.93
SMC6-205ENST00000430591 A0A0G2JS52 829 aa9.23□□□□□ -0.93
SMC6-205ENST00000430591 MYT1Q01538 1121 aa9.23□□□□□ -0.93
SMC6-205ENST00000430591 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
SMC6-205ENST00000430591 ARHGEF25Q86VW2 580 aa9.23□□□□□ -0.93
SMC6-205ENST00000430591 BRD4O60885 1362 aaPredicted RBP9.23□□□□□ -0.93
SMC6-205ENST00000430591 FYB1O15117 783 aa9.22□□□□□ -0.93
SMC6-205ENST00000430591 SLAIN1Q8ND83 568 aa9.22□□□□□ -0.93
SMC6-205ENST00000430591 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
SMC6-205ENST00000430591 PUS7Q96PZ0 661 aaKnown RBP9.22□□□□□ -0.93
SMC6-205ENST00000430591 TERF2IPQ9NYB0 399 aa9.22□□□□□ -0.93
SMC6-205ENST00000430591 AATKQ6ZMQ8 1374 aa9.22□□□□□ -0.93
SMC6-205ENST00000430591 LRRC37A3O60309 1634 aa9.21□□□□□ -0.93
SMC6-205ENST00000430591 STK25O00506 426 aa9.21□□□□□ -0.94
SMC6-205ENST00000430591 RRS1Q15050 365 aaKnown RBP9.21□□□□□ -0.94
SMC6-205ENST00000430591 STK24Q9Y6E0 443 aa9.21□□□□□ -0.94
SMC6-205ENST00000430591 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
SMC6-205ENST00000430591 EVA1CP58658 441 aa9.2□□□□□ -0.94
SMC6-205ENST00000430591 KIF7Q2M1P5 1343 aa9.2□□□□□ -0.94
SMC6-205ENST00000430591 MAP3K19Q56UN5 1328 aa9.2□□□□□ -0.94
SMC6-205ENST00000430591 NINLQ9Y2I6 1382 aa9.2□□□□□ -0.94
SMC6-205ENST00000430591 PARP4Q9UKK3 1724 aaKnown RBP9.19□□□□□ -0.94
SMC6-205ENST00000430591 DEFB132Q7Z7B7 95 aa9.19□□□□□ -0.94
SMC6-205ENST00000430591 LTV1Q96GA3 475 aaPredicted RBP9.19□□□□□ -0.94
SMC6-205ENST00000430591 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
SMC6-205ENST00000430591 TNS1Q9HBL0 1735 aaKnown RBP9.19□□□□□ -0.94
SMC6-205ENST00000430591 ANKRD26Q9UPS8 1709 aa9.19□□□□□ -0.94
SMC6-205ENST00000430591 MAP2P11137 1827 aaKnown RBP9.19□□□□□ -0.94
SMC6-205ENST00000430591 CRB1P82279 1406 aa9.18□□□□□ -0.94
SMC6-205ENST00000430591 PTF1AQ7RTS3 328 aa9.18□□□□□ -0.94
SMC6-205ENST00000430591 KRT27Q7Z3Y8 459 aa9.18□□□□□ -0.94
SMC6-205ENST00000430591 PANK3Q9H999 370 aa9.18□□□□□ -0.94
SMC6-205ENST00000430591 FAM208AQ9UK61 1670 aaKnown RBP9.18□□□□□ -0.94
SMC6-205ENST00000430591 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
SMC6-205ENST00000430591 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
SMC6-205ENST00000430591 DISP2A7MBM2 1401 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 WDR17Q8IZU2 1322 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 TNNT2P45379 298 aaPredicted RBP9.17□□□□□ -0.94
SMC6-205ENST00000430591 CNGB1Q14028 1251 aaPredicted RBP9.17□□□□□ -0.94
SMC6-205ENST00000430591 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 USHBP1Q8N6Y0 703 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 KCNH5Q8NCM2 988 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 ANKRD24Q8TF21 1146 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 COG3Q96JB2 828 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.17□□□□□ -0.94
SMC6-205ENST00000430591 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 SBF2Q86WG5 1849 aa9.17□□□□□ -0.94
SMC6-205ENST00000430591 ERBB3P21860 1342 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 WASHC2AQ641Q2 1341 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 HOXC9P31274 260 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 TCP11L2Q8N4U5 519 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 FBXO22Q8NEZ5 403 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 SHANK3Q9BYB0 1731 aa9.16□□□□□ -0.94
SMC6-205ENST00000430591 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
SMC6-205ENST00000430591 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
SMC6-205ENST00000430591 TMEM121BQ9BXQ6 578 aaPredicted RBP9.15□□□□□ -0.94
SMC6-205ENST00000430591 NLRP2Q9NX02 1062 aa9.15□□□□□ -0.94
SMC6-205ENST00000430591 CCDC7Q96M83 1385 aa9.14□□□□□ -0.95
SMC6-205ENST00000430591 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
SMC6-205ENST00000430591 IP6K1Q92551 441 aa9.14□□□□□ -0.95
SMC6-205ENST00000430591 FAM163AQ96GL9 167 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms