RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 SOCS7O14512 581 aa33.75■■■□□ 2.99
CPNE1-212ENST00000430570 HMOX1P09601 288 aa33.75■■■□□ 2.99
CPNE1-212ENST00000430570 KDRP35968 1356 aa33.74■■■□□ 2.99
CPNE1-212ENST00000430570 DDX54Q8TDD1 881 aaKnown RBP33.73■■■□□ 2.99
CPNE1-212ENST00000430570 UPF1Q92900 1129 aaKnown RBP eCLIP33.72■■■□□ 2.99
CPNE1-212ENST00000430570 SHANK3Q9BYB0 1731 aa33.71■■■□□ 2.99
CPNE1-212ENST00000430570 FAM196AQ6ZSG2 479 aa33.71■■■□□ 2.99
CPNE1-212ENST00000430570 ANP32CO43423 234 aa33.7■■■□□ 2.99
CPNE1-212ENST00000430570 NUDCQ9Y266 331 aa33.7■■■□□ 2.99
CPNE1-212ENST00000430570 PKD1L3Q7Z443 1732 aa33.66■■■□□ 2.98
CPNE1-212ENST00000430570 CYP27B1O15528 508 aa33.65■■■□□ 2.98
CPNE1-212ENST00000430570 U2AF1L5P0DN76 240 aaPredicted RBP33.65■■■□□ 2.98
CPNE1-212ENST00000430570 U2AF1Q01081 240 aaKnown RBP eCLIP33.65■■■□□ 2.982e-6■□□□□ 8.5
CPNE1-212ENST00000430570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.65■■■□□ 2.981e-6■■□□□ 12.2
CPNE1-212ENST00000430570 SPG7Q9UQ90 795 aa33.65■■■□□ 2.98
CPNE1-212ENST00000430570 PCDH11XQ9BZA7 1347 aa33.62■■■□□ 2.97
CPNE1-212ENST00000430570 PCDH11YQ9BZA8 1340 aa33.62■■■□□ 2.97
CPNE1-212ENST00000430570 BCL9O00512 1426 aa33.61■■■□□ 2.97
CPNE1-212ENST00000430570 TRIM37O94972 964 aa33.61■■■□□ 2.97
CPNE1-212ENST00000430570 PLEKHO1Q53GL0 409 aaPredicted RBP33.61■■■□□ 2.97
CPNE1-212ENST00000430570 EP400Q96L91 3159 aa33.61■■■□□ 2.97
CPNE1-212ENST00000430570 CCDC184Q52MB2 194 aa33.6■■■□□ 2.97
CPNE1-212ENST00000430570 RSPH6AQ9H0K4 717 aa33.6■■■□□ 2.97
CPNE1-212ENST00000430570 PLEKHG2Q9H7P9 1386 aa33.59■■■□□ 2.97
CPNE1-212ENST00000430570 AMOTQ4VCS5 1084 aa33.58■■■□□ 2.97
CPNE1-212ENST00000430570 PTF1AQ7RTS3 328 aa33.58■■■□□ 2.97
CPNE1-212ENST00000430570 ACSBG1Q96GR2 724 aa33.58■■■□□ 2.97
CPNE1-212ENST00000430570 SBF2Q86WG5 1849 aa33.58■■■□□ 2.97
CPNE1-212ENST00000430570 PRKAR2BP31323 418 aa33.56■■■□□ 2.96
CPNE1-212ENST00000430570 KCNQ2O43526 872 aa33.55■■■□□ 2.96
CPNE1-212ENST00000430570 PHKG2P15735 406 aa33.55■■■□□ 2.96
CPNE1-212ENST00000430570 IFNL2Q8IZJ0 200 aa33.55■■■□□ 2.96
CPNE1-212ENST00000430570 FCHSD2O94868 740 aa33.54■■■□□ 2.96
CPNE1-212ENST00000430570 ZNF530Q6P9A1 599 aaPredicted RBP33.54■■■□□ 2.96
CPNE1-212ENST00000430570 CCDC125Q86Z20 511 aa33.54■■■□□ 2.96
CPNE1-212ENST00000430570 MTHFSDQ2M296 383 aaKnown RBP33.53■■■□□ 2.96
CPNE1-212ENST00000430570 NKX1-1Q15270 411 aaPredicted RBP33.53■■■□□ 2.96
CPNE1-212ENST00000430570 PHACTR3Q96KR7 559 aa33.53■■■□□ 2.96
CPNE1-212ENST00000430570 KAT6BQ8WYB5 2073 aa33.5■■■□□ 2.95
CPNE1-212ENST00000430570 BCL11BQ9C0K0 894 aaPredicted RBP33.5■■■□□ 2.95
CPNE1-212ENST00000430570 TNS1Q9HBL0 1735 aaKnown RBP33.49■■■□□ 2.95
CPNE1-212ENST00000430570 PRIM1P49642 420 aaKnown RBP33.48■■■□□ 2.95
CPNE1-212ENST00000430570 SF3B2Q13435 895 aaKnown RBP33.48■■■□□ 2.95
CPNE1-212ENST00000430570 DEFB132Q7Z7B7 95 aa33.48■■■□□ 2.95
CPNE1-212ENST00000430570 DOT1LQ8TEK3 1739 aa33.47■■■□□ 2.95
CPNE1-212ENST00000430570 NHSQ6T4R5 1651 aa33.46■■■□□ 2.95
CPNE1-212ENST00000430570 APBA3O96018 575 aa33.46■■■□□ 2.95
CPNE1-212ENST00000430570 C1orf141Q5JVX7 400 aa33.46■■■□□ 2.95
CPNE1-212ENST00000430570 DIEXFQ68CQ4 756 aaKnown RBP33.46■■■□□ 2.95
CPNE1-212ENST00000430570 PLEKHF1Q96S99 279 aa33.46■■■□□ 2.95
CPNE1-212ENST00000430570 TOGARAM1Q9Y4F4 1720 aa33.44■■■□□ 2.94
CPNE1-212ENST00000430570 WDR43Q15061 677 aaKnown RBP eCLIP33.44■■■□□ 2.94
CPNE1-212ENST00000430570 AKAP4Q5JQC9 854 aa33.44■■■□□ 2.94
CPNE1-212ENST00000430570 SYTL4Q96C24 671 aaPredicted RBP33.44■■■□□ 2.94
CPNE1-212ENST00000430570 ADAMTS8Q9UP79 889 aa33.44■■■□□ 2.94
CPNE1-212ENST00000430570 MRS2Q9HD23 443 aa33.43■■■□□ 2.94
CPNE1-212ENST00000430570 MPRIPQ6WCQ1 1025 aa33.42■■■□□ 2.94
CPNE1-212ENST00000430570 HSP90AB1P08238 724 aaKnown RBP33.41■■■□□ 2.94
CPNE1-212ENST00000430570 EN1Q05925 392 aaPredicted RBP33.41■■■□□ 2.94
CPNE1-212ENST00000430570 GAS2L2Q8NHY3 880 aa33.41■■■□□ 2.94
CPNE1-212ENST00000430570 KDM6AO15550 1401 aaPredicted RBP33.41■■■□□ 2.94
CPNE1-212ENST00000430570 BAG6P46379 1132 aa33.4■■■□□ 2.94
CPNE1-212ENST00000430570 DCAF5Q96JK2 942 aa33.4■■■□□ 2.94
CPNE1-212ENST00000430570 CCDC146Q8IYE0 955 aa33.37■■■□□ 2.93
CPNE1-212ENST00000430570 PNNQ9H307 717 aaKnown RBP33.37■■■□□ 2.93
CPNE1-212ENST00000430570 LGR6Q9HBX8 967 aa33.37■■■□□ 2.93
CPNE1-212ENST00000430570 BTAF1O14981 1849 aa33.36■■■□□ 2.93
CPNE1-212ENST00000430570 ITGB4P16144 1822 aa33.36■■■□□ 2.93
CPNE1-212ENST00000430570 PNISRQ8TF01 805 aaKnown RBP33.36■■■□□ 2.93
CPNE1-212ENST00000430570 EZH2Q15910 746 aaKnown RBP33.35■■■□□ 2.93
CPNE1-212ENST00000430570 CAMKK2Q96RR4 588 aa33.35■■■□□ 2.93
CPNE1-212ENST00000430570 PIGBQ92521 554 aa33.34■■■□□ 2.93
CPNE1-212ENST00000430570 GNAT3A8MTJ3 354 aa33.33■■■□□ 2.93
CPNE1-212ENST00000430570 ERVV-2B6SEH9 535 aa33.33■■■□□ 2.93
CPNE1-212ENST00000430570 RNMTO43148 476 aaKnown RBP33.33■■■□□ 2.93
CPNE1-212ENST00000430570 NEFMP07197 916 aa33.33■■■□□ 2.93
CPNE1-212ENST00000430570 MAP3K5Q99683 1374 aa33.33■■■□□ 2.93
CPNE1-212ENST00000430570 PLSCR1O15162 318 aa33.32■■■□□ 2.93
CPNE1-212ENST00000430570 MAPK8IP3Q9UPT6 1336 aa33.32■■■□□ 2.92
CPNE1-212ENST00000430570 SCN11AQ9UI33 1791 aa33.31■■■□□ 2.92
CPNE1-212ENST00000430570 IL17REQ8NFR9 667 aa33.3■■■□□ 2.92
CPNE1-212ENST00000430570 TMOD3Q9NYL9 352 aa33.3■■■□□ 2.92
CPNE1-212ENST00000430570 RUNDC1Q96C34 613 aa33.29■■■□□ 2.92
CPNE1-212ENST00000430570 CABP4P57796 275 aa33.28■■■□□ 2.92
CPNE1-212ENST00000430570 NFE2L2Q16236 605 aa33.28■■■□□ 2.92
CPNE1-212ENST00000430570 VIRMAQ69YN4 1812 aaKnown RBP33.28■■■□□ 2.92
CPNE1-212ENST00000430570 ADAMTS7Q9UKP4 1686 aa33.28■■■□□ 2.92
CPNE1-212ENST00000430570 PROM2Q8N271 834 aa33.28■■■□□ 2.92
CPNE1-212ENST00000430570 MIER1Q8N108 512 aa33.27■■■□□ 2.92
CPNE1-212ENST00000430570 NFATC2IPQ8NCF5 419 aa33.27■■■□□ 2.92
CPNE1-212ENST00000430570 DCTN1Q14203 1278 aa33.25■■■□□ 2.91
CPNE1-212ENST00000430570 DLG5Q8TDM6 1919 aa33.24■■■□□ 2.91
CPNE1-212ENST00000430570 SLC52A2Q9HAB3 445 aa33.24■■■□□ 2.91
CPNE1-212ENST00000430570 TMPOP42166 694 aaKnown RBP33.23■■■□□ 2.91
CPNE1-212ENST00000430570 TXNRD1Q16881 649 aa33.23■■■□□ 2.91
CPNE1-212ENST00000430570 MCM10Q7L590 875 aa33.23■■■□□ 2.91
CPNE1-212ENST00000430570 ASAP1Q9ULH1 1129 aa33.23■■■□□ 2.91
CPNE1-212ENST00000430570 RRP7AQ9Y3A4 280 aaKnown RBP33.23■■■□□ 2.91
CPNE1-212ENST00000430570 RTF1Q92541 710 aaKnown RBP33.22■■■□□ 2.91
CPNE1-212ENST00000430570 ATG3Q9NT62 314 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms