RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 NBPF4Q96M43 638 aa21.08■□□□□ 0.97
TOP3B-204ENST00000430142 UTRNP46939 3433 aa21.08■□□□□ 0.96
TOP3B-204ENST00000430142 MEGF6O75095 1541 aa21.08■□□□□ 0.96
TOP3B-204ENST00000430142 PNPLA7Q6ZV29 1317 aa21.07■□□□□ 0.96
TOP3B-204ENST00000430142 USHBP1Q8N6Y0 703 aa21.07■□□□□ 0.96
TOP3B-204ENST00000430142 SLC16A10Q8TF71 515 aa21.07■□□□□ 0.96
TOP3B-204ENST00000430142 TFCP2L1Q9NZI6 479 aa21.07■□□□□ 0.96
TOP3B-204ENST00000430142 RGPD2P0DJD1 1756 aa21.07■□□□□ 0.96
TOP3B-204ENST00000430142 NSD2O96028 1365 aa21.07■□□□□ 0.96
TOP3B-204ENST00000430142 ZNF784Q8NCA9 323 aaPredicted RBP21.06■□□□□ 0.96
TOP3B-204ENST00000430142 RTL1A6NKG5 1358 aa21.06■□□□□ 0.96
TOP3B-204ENST00000430142 MAP3K5Q99683 1374 aa21.05■□□□□ 0.96
TOP3B-204ENST00000430142 USP47Q96K76 1375 aa21.04■□□□□ 0.96
TOP3B-204ENST00000430142 DOT1LQ8TEK3 1739 aa21.04■□□□□ 0.96
TOP3B-204ENST00000430142 POLD1P28340 1107 aa21.03■□□□□ 0.96
TOP3B-204ENST00000430142 KLHL34Q8N239 644 aa21.03■□□□□ 0.96
TOP3B-204ENST00000430142 CCNL1Q9UK58 526 aaPredicted RBP21.03■□□□□ 0.96
TOP3B-204ENST00000430142 SHANK3Q9BYB0 1731 aa21.03■□□□□ 0.96
TOP3B-204ENST00000430142 HSP90AB2PQ58FF8 381 aa21.02■□□□□ 0.96
TOP3B-204ENST00000430142 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.96
TOP3B-204ENST00000430142 GPR162Q16538 588 aa21.01■□□□□ 0.95
TOP3B-204ENST00000430142 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
TOP3B-204ENST00000430142 QSER1Q2KHR3 1735 aa21.01■□□□□ 0.95
TOP3B-204ENST00000430142 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
TOP3B-204ENST00000430142 SMG6Q86US8 1419 aaKnown RBP21■□□□□ 0.95
TOP3B-204ENST00000430142 LY75O60449 1722 aa20.99■□□□□ 0.95
TOP3B-204ENST00000430142 INSRP06213 1382 aa20.98■□□□□ 0.95
TOP3B-204ENST00000430142 CDCA8Q53HL2 280 aa20.98■□□□□ 0.95
TOP3B-204ENST00000430142 CARD14Q9BXL6 1004 aa20.98■□□□□ 0.95
TOP3B-204ENST00000430142 TUBGCP6Q96RT7 1819 aa20.97■□□□□ 0.95
TOP3B-204ENST00000430142 MSH5O43196 834 aa20.97■□□□□ 0.95
TOP3B-204ENST00000430142 COL23A1Q86Y22 540 aaPredicted RBP20.96■□□□□ 0.95
TOP3B-204ENST00000430142 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
TOP3B-204ENST00000430142 FLT4P35916 1363 aa20.96■□□□□ 0.95
TOP3B-204ENST00000430142 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
TOP3B-204ENST00000430142 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
TOP3B-204ENST00000430142 PCDH11XQ9BZA7 1347 aa20.95■□□□□ 0.94
TOP3B-204ENST00000430142 PCDH11YQ9BZA8 1340 aa20.95■□□□□ 0.94
TOP3B-204ENST00000430142 CHD4Q14839 1912 aa20.94■□□□□ 0.94
TOP3B-204ENST00000430142 EMILIN1Q9Y6C2 1016 aa20.94■□□□□ 0.94
TOP3B-204ENST00000430142 CYP27B1O15528 508 aa20.93■□□□□ 0.94
TOP3B-204ENST00000430142 MPRIPQ6WCQ1 1025 aa20.93■□□□□ 0.94
TOP3B-204ENST00000430142 KIF24Q5T7B8 1368 aa20.93■□□□□ 0.94
TOP3B-204ENST00000430142 KIF20BQ96Q89 1820 aa20.92■□□□□ 0.94
TOP3B-204ENST00000430142 MSL1Q68DK7 614 aa20.91■□□□□ 0.94
TOP3B-204ENST00000430142 NSD3Q9BZ95 1437 aa20.91■□□□□ 0.94
TOP3B-204ENST00000430142 PALLDQ8WX93 1383 aa20.9■□□□□ 0.94
TOP3B-204ENST00000430142 PPM1GO15355 546 aaPredicted RBP20.9■□□□□ 0.94
TOP3B-204ENST00000430142 YBX3P16989 372 aaKnown RBP eCLIP20.86■□□□□ 0.93
TOP3B-204ENST00000430142 C1QTNF8P60827 252 aa20.86■□□□□ 0.93
TOP3B-204ENST00000430142 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
TOP3B-204ENST00000430142 PIGBQ92521 554 aa20.86■□□□□ 0.93
TOP3B-204ENST00000430142 SMARCC1Q92922 1105 aaPredicted RBP20.86■□□□□ 0.93
TOP3B-204ENST00000430142 C5P01031 1676 aa20.86■□□□□ 0.93
TOP3B-204ENST00000430142 WASHC2AQ641Q2 1341 aa20.85■□□□□ 0.93
TOP3B-204ENST00000430142 HMGB2P26583 209 aaKnown RBP20.85■□□□□ 0.93
TOP3B-204ENST00000430142 NKX1-1Q15270 411 aaPredicted RBP20.85■□□□□ 0.93
TOP3B-204ENST00000430142 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
TOP3B-204ENST00000430142 GOLGB1Q14789 3259 aaKnown RBP20.84■□□□□ 0.93
TOP3B-204ENST00000430142 EYA1Q99502 592 aa20.84■□□□□ 0.93
TOP3B-204ENST00000430142 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
TOP3B-204ENST00000430142 GRIN3BO60391 1043 aa20.83■□□□□ 0.93
TOP3B-204ENST00000430142 SMIM5Q71RC9 77 aa20.83■□□□□ 0.93
TOP3B-204ENST00000430142 AMIGO3Q86WK7 504 aa20.83■□□□□ 0.93
TOP3B-204ENST00000430142 NCAPD2Q15021 1401 aa20.83■□□□□ 0.93
TOP3B-204ENST00000430142 SENP3-EIF4A1A0A087X0R7 540 aa20.82■□□□□ 0.92
TOP3B-204ENST00000430142 AK7Q96M32 723 aa20.82■□□□□ 0.92
TOP3B-204ENST00000430142 POLKQ9UBT6 870 aa20.82■□□□□ 0.92
TOP3B-204ENST00000430142 TIMELESSQ9UNS1 1208 aa20.82■□□□□ 0.92
TOP3B-204ENST00000430142 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
TOP3B-204ENST00000430142 ITGB4P16144 1822 aa20.81■□□□□ 0.92
TOP3B-204ENST00000430142 TAF1LQ8IZX4 1826 aa20.81■□□□□ 0.92
TOP3B-204ENST00000430142 POLR3GLQ9BT43 218 aa20.81■□□□□ 0.92
TOP3B-204ENST00000430142 CD2APQ9Y5K6 639 aa20.81■□□□□ 0.92
TOP3B-204ENST00000430142 PHF14O94880 888 aa20.8■□□□□ 0.92
TOP3B-204ENST00000430142 C4BP0C0L5 1744 aa20.8■□□□□ 0.92
TOP3B-204ENST00000430142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.923e-7■■□□□ 13.4
TOP3B-204ENST00000430142 CLSPNQ9HAW4 1339 aa20.78■□□□□ 0.92
TOP3B-204ENST00000430142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.78■□□□□ 0.92
TOP3B-204ENST00000430142 LOC102724428A0A0B4J2F2 783 aa20.78■□□□□ 0.92
TOP3B-204ENST00000430142 GIGYF1O75420 1035 aaPredicted RBP20.78■□□□□ 0.92
TOP3B-204ENST00000430142 TNNT2P45379 298 aaPredicted RBP20.78■□□□□ 0.92
TOP3B-204ENST00000430142 SIK1P57059 783 aa20.78■□□□□ 0.92
TOP3B-204ENST00000430142 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
TOP3B-204ENST00000430142 TMOD3Q9NYL9 352 aa20.78■□□□□ 0.92
TOP3B-204ENST00000430142 ASAP1Q9ULH1 1129 aa20.78■□□□□ 0.92
TOP3B-204ENST00000430142 ANKRD26Q9UPS8 1709 aa20.78■□□□□ 0.92
TOP3B-204ENST00000430142 MAP2P11137 1827 aaKnown RBP20.77■□□□□ 0.92
TOP3B-204ENST00000430142 PHKG2P15735 406 aa20.77■□□□□ 0.92
TOP3B-204ENST00000430142 EIF4A2Q14240 407 aaKnown RBP20.77■□□□□ 0.92
TOP3B-204ENST00000430142 IFNL2Q8IZJ0 200 aa20.77■□□□□ 0.92
TOP3B-204ENST00000430142 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
TOP3B-204ENST00000430142 ITPK1Q13572 414 aa20.75■□□□□ 0.91
TOP3B-204ENST00000430142 SSFA2P28290 1259 aa20.74■□□□□ 0.91
TOP3B-204ENST00000430142 ATP6V1AP38606 617 aa20.74■□□□□ 0.91
TOP3B-204ENST00000430142 ATG3Q9NT62 314 aa20.74■□□□□ 0.91
TOP3B-204ENST00000430142 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
TOP3B-204ENST00000430142 GNPATO15228 680 aa20.72■□□□□ 0.91
TOP3B-204ENST00000430142 WWC3Q9ULE0 1092 aa20.71■□□□□ 0.91
TOP3B-204ENST00000430142 PANK3Q9H999 370 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms