RNA–Protein interactions for RNA: ENST00000429805.1

PNPT1-204, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 3

Gene PNPT1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-204ENST00000429805 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
PNPT1-204ENST00000429805 RIPK4P57078 832 aa16.62■□□□□ 0.25
PNPT1-204ENST00000429805 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
PNPT1-204ENST00000429805 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
PNPT1-204ENST00000429805 PHACTR3Q96KR7 559 aa16.62■□□□□ 0.25
PNPT1-204ENST00000429805 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
PNPT1-204ENST00000429805 PRDM11Q9NQV5 511 aa16.62■□□□□ 0.25
PNPT1-204ENST00000429805 KIAA0232Q92628 1395 aa16.62■□□□□ 0.25
PNPT1-204ENST00000429805 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
PNPT1-204ENST00000429805 ONECUT3O60422 494 aaPredicted RBP16.61■□□□□ 0.25
PNPT1-204ENST00000429805 LMOD3Q0VAK6 560 aa16.61■□□□□ 0.25
PNPT1-204ENST00000429805 CHRNA2Q15822 529 aa16.61■□□□□ 0.25
PNPT1-204ENST00000429805 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
PNPT1-204ENST00000429805 EYA1Q99502 592 aa16.61■□□□□ 0.25
PNPT1-204ENST00000429805 CAMTA1Q9Y6Y1 1673 aa16.61■□□□□ 0.25
PNPT1-204ENST00000429805 CPDO75976 1380 aa16.61■□□□□ 0.25
PNPT1-204ENST00000429805 A0A0G2JS52 829 aa16.6■□□□□ 0.25
PNPT1-204ENST00000429805 MYT1Q01538 1121 aa16.6■□□□□ 0.25
PNPT1-204ENST00000429805 FKBP8Q14318 412 aa16.6■□□□□ 0.25
PNPT1-204ENST00000429805 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
PNPT1-204ENST00000429805 ZC3H6P61129 1189 aaKnown RBP16.59■□□□□ 0.25
PNPT1-204ENST00000429805 MYH16Q9H6N6 1097 aa16.59■□□□□ 0.25
PNPT1-204ENST00000429805 COL18A1P39060 1754 aa16.59■□□□□ 0.25
PNPT1-204ENST00000429805 CALD1Q05682 793 aaKnown RBP16.58■□□□□ 0.24
PNPT1-204ENST00000429805 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
PNPT1-204ENST00000429805 CCDC125Q86Z20 511 aa16.58■□□□□ 0.24
PNPT1-204ENST00000429805 SPATA31A5Q5VU36 1347 aa16.58■□□□□ 0.24
PNPT1-204ENST00000429805 SPATA31A7Q8IWB4 1347 aa16.58■□□□□ 0.24
PNPT1-204ENST00000429805 DLG5Q8TDM6 1919 aa16.58■□□□□ 0.24
PNPT1-204ENST00000429805 LMO7Q8WWI1 1683 aa16.57■□□□□ 0.24
PNPT1-204ENST00000429805 RRP1P56182 461 aaKnown RBP16.56■□□□□ 0.24
PNPT1-204ENST00000429805 STRN4Q9NRL3 753 aa16.56■□□□□ 0.24
PNPT1-204ENST00000429805 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
PNPT1-204ENST00000429805 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
PNPT1-204ENST00000429805 THSD7AQ9UPZ6 1657 aa16.55■□□□□ 0.24
PNPT1-204ENST00000429805 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
PNPT1-204ENST00000429805 FAM182BQ5T319 152 aa16.54■□□□□ 0.24
PNPT1-204ENST00000429805 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
PNPT1-204ENST00000429805 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
PNPT1-204ENST00000429805 ERBB3P21860 1342 aa16.53■□□□□ 0.24
PNPT1-204ENST00000429805 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
PNPT1-204ENST00000429805 LTV1Q96GA3 475 aaPredicted RBP16.53■□□□□ 0.24
PNPT1-204ENST00000429805 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.24
PNPT1-204ENST00000429805 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.24
PNPT1-204ENST00000429805 RGPD5Q99666 1765 aa16.52■□□□□ 0.24
PNPT1-204ENST00000429805 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
PNPT1-204ENST00000429805 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
PNPT1-204ENST00000429805 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
PNPT1-204ENST00000429805 ZBTB7CA1YPR0 619 aa16.51■□□□□ 0.23
PNPT1-204ENST00000429805 HTATSF1O43719 755 aaKnown RBP16.51■□□□□ 0.23
PNPT1-204ENST00000429805 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
PNPT1-204ENST00000429805 AXIN2Q9Y2T1 843 aa16.51■□□□□ 0.23
PNPT1-204ENST00000429805 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
PNPT1-204ENST00000429805 ZNF853P0CG23 659 aa16.5■□□□□ 0.23
PNPT1-204ENST00000429805 GNAI1P63096 354 aa16.5■□□□□ 0.23
PNPT1-204ENST00000429805 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
PNPT1-204ENST00000429805 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
PNPT1-204ENST00000429805 SF3B2Q13435 895 aaKnown RBP16.49■□□□□ 0.23
PNPT1-204ENST00000429805 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
PNPT1-204ENST00000429805 EVA1CP58658 441 aa16.48■□□□□ 0.23
PNPT1-204ENST00000429805 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
PNPT1-204ENST00000429805 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
PNPT1-204ENST00000429805 CRB1P82279 1406 aa16.46■□□□□ 0.23
PNPT1-204ENST00000429805 IRX6P78412 446 aaPredicted RBP16.46■□□□□ 0.23
PNPT1-204ENST00000429805 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
PNPT1-204ENST00000429805 TSR2Q969E8 191 aaKnown RBP16.46■□□□□ 0.23
PNPT1-204ENST00000429805 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
PNPT1-204ENST00000429805 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
PNPT1-204ENST00000429805 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
PNPT1-204ENST00000429805 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
PNPT1-204ENST00000429805 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
PNPT1-204ENST00000429805 TNS1Q9HBL0 1735 aaKnown RBP16.45■□□□□ 0.22
PNPT1-204ENST00000429805 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
PNPT1-204ENST00000429805 RARSP54136 660 aaKnown RBP16.44■□□□□ 0.22
PNPT1-204ENST00000429805 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
PNPT1-204ENST00000429805 BARGINQ6ZT62 677 aa16.44■□□□□ 0.22
PNPT1-204ENST00000429805 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
PNPT1-204ENST00000429805 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
PNPT1-204ENST00000429805 BAG6P46379 1132 aa16.43■□□□□ 0.22
PNPT1-204ENST00000429805 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
PNPT1-204ENST00000429805 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
PNPT1-204ENST00000429805 CHL1O00533 1208 aa16.42■□□□□ 0.22
PNPT1-204ENST00000429805 EN1Q05925 392 aaPredicted RBP16.42■□□□□ 0.22
PNPT1-204ENST00000429805 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
PNPT1-204ENST00000429805 MCM10Q7L590 875 aa16.42■□□□□ 0.22
PNPT1-204ENST00000429805 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
PNPT1-204ENST00000429805 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
PNPT1-204ENST00000429805 WDR17Q8IZU2 1322 aa16.42■□□□□ 0.22
PNPT1-204ENST00000429805 CEMIPQ8WUJ3 1361 aa16.41■□□□□ 0.22
PNPT1-204ENST00000429805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.41■□□□□ 0.221e-7■■■□□ 15.6
PNPT1-204ENST00000429805 ADAMTS7Q9UKP4 1686 aa16.4■□□□□ 0.22
PNPT1-204ENST00000429805 BCAR3O75815 825 aa16.4■□□□□ 0.22
PNPT1-204ENST00000429805 TRIM37O94972 964 aa16.4■□□□□ 0.22
PNPT1-204ENST00000429805 ALDH1L2Q3SY69 923 aa16.4■□□□□ 0.22
PNPT1-204ENST00000429805 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
PNPT1-204ENST00000429805 NLRP2Q9NX02 1062 aa16.4■□□□□ 0.22
PNPT1-204ENST00000429805 LAS1LQ9Y4W2 734 aaKnown RBP16.4■□□□□ 0.22
PNPT1-204ENST00000429805 SRCAPQ6ZRS2 3230 aa16.4■□□□□ 0.22
PNPT1-204ENST00000429805 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.21
PNPT1-204ENST00000429805 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms