RNA–Protein interactions for RNA: ENST00000429617.5

CASP7-206, Transcript of caspase 7, humanhuman

TSL 3

Gene CASP7, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-206ENST00000429617 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
CASP7-206ENST00000429617 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
CASP7-206ENST00000429617 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
CASP7-206ENST00000429617 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
CASP7-206ENST00000429617 HOXC9P31274 260 aa16.53■□□□□ 0.24
CASP7-206ENST00000429617 ANKRD36BQ8N2N9 1353 aa16.52■□□□□ 0.24
CASP7-206ENST00000429617 MEGF6O75095 1541 aa16.52■□□□□ 0.24
CASP7-206ENST00000429617 COG3Q96JB2 828 aa16.52■□□□□ 0.24
CASP7-206ENST00000429617 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
CASP7-206ENST00000429617 NSD2O96028 1365 aa16.51■□□□□ 0.23
CASP7-206ENST00000429617 DOT1LQ8TEK3 1739 aa16.51■□□□□ 0.23
CASP7-206ENST00000429617 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
CASP7-206ENST00000429617 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
CASP7-206ENST00000429617 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
CASP7-206ENST00000429617 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
CASP7-206ENST00000429617 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
CASP7-206ENST00000429617 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
CASP7-206ENST00000429617 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
CASP7-206ENST00000429617 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
CASP7-206ENST00000429617 AMPHP49418 695 aa16.48■□□□□ 0.23
CASP7-206ENST00000429617 LY75O60449 1722 aa16.48■□□□□ 0.23
CASP7-206ENST00000429617 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
CASP7-206ENST00000429617 FYB1O15117 783 aa16.47■□□□□ 0.23
CASP7-206ENST00000429617 KCNQ4P56696 695 aa16.47■□□□□ 0.23
CASP7-206ENST00000429617 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
CASP7-206ENST00000429617 RALBP1Q15311 655 aa16.47■□□□□ 0.23
CASP7-206ENST00000429617 MAP3K5Q99683 1374 aa16.47■□□□□ 0.23
CASP7-206ENST00000429617 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.23
CASP7-206ENST00000429617 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
CASP7-206ENST00000429617 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
CASP7-206ENST00000429617 ARXQ96QS3 562 aa16.46■□□□□ 0.23
CASP7-206ENST00000429617 GGNBP2Q9H3C7 697 aa16.46■□□□□ 0.23
CASP7-206ENST00000429617 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
CASP7-206ENST00000429617 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
CASP7-206ENST00000429617 ZCRB1Q8TBF4 217 aaKnown RBP16.45■□□□□ 0.22
CASP7-206ENST00000429617 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
CASP7-206ENST00000429617 SYTL4Q96C24 671 aaPredicted RBP16.44■□□□□ 0.22
CASP7-206ENST00000429617 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
CASP7-206ENST00000429617 PANK3Q9H999 370 aa16.42■□□□□ 0.22
CASP7-206ENST00000429617 ZNF784Q8NCA9 323 aaPredicted RBP16.41■□□□□ 0.22
CASP7-206ENST00000429617 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
CASP7-206ENST00000429617 INSRP06213 1382 aa16.4■□□□□ 0.22
CASP7-206ENST00000429617 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
CASP7-206ENST00000429617 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
CASP7-206ENST00000429617 SLC16A10Q8TF71 515 aa16.4■□□□□ 0.22
CASP7-206ENST00000429617 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.21
CASP7-206ENST00000429617 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
CASP7-206ENST00000429617 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
CASP7-206ENST00000429617 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.21
CASP7-206ENST00000429617 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
CASP7-206ENST00000429617 CHD4Q14839 1912 aa16.39■□□□□ 0.21
CASP7-206ENST00000429617 FLT4P35916 1363 aa16.38■□□□□ 0.21
CASP7-206ENST00000429617 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
CASP7-206ENST00000429617 KNSTRNQ9Y448 316 aa16.38■□□□□ 0.21
CASP7-206ENST00000429617 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
CASP7-206ENST00000429617 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
CASP7-206ENST00000429617 NCAPD2Q15021 1401 aa16.37■□□□□ 0.21
CASP7-206ENST00000429617 ANKRD26Q9UPS8 1709 aa16.37■□□□□ 0.21
CASP7-206ENST00000429617 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
CASP7-206ENST00000429617 C5P01031 1676 aa16.37■□□□□ 0.21
CASP7-206ENST00000429617 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
CASP7-206ENST00000429617 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
CASP7-206ENST00000429617 EMILIN1Q9Y6C2 1016 aa16.36■□□□□ 0.21
CASP7-206ENST00000429617 CYP27B1O15528 508 aa16.35■□□□□ 0.21
CASP7-206ENST00000429617 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
CASP7-206ENST00000429617 POLD1P28340 1107 aa16.35■□□□□ 0.21
CASP7-206ENST00000429617 NLGN2Q8NFZ4 835 aa16.35■□□□□ 0.21
CASP7-206ENST00000429617 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
CASP7-206ENST00000429617 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
CASP7-206ENST00000429617 COL23A1Q86Y22 540 aaPredicted RBP16.34■□□□□ 0.21
CASP7-206ENST00000429617 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
CASP7-206ENST00000429617 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
CASP7-206ENST00000429617 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.21
CASP7-206ENST00000429617 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.2
CASP7-206ENST00000429617 PALLDQ8WX93 1383 aa16.33■□□□□ 0.2
CASP7-206ENST00000429617 ITGB4P16144 1822 aa16.32■□□□□ 0.2
CASP7-206ENST00000429617 GPR162Q16538 588 aa16.32■□□□□ 0.2
CASP7-206ENST00000429617 UTRNP46939 3433 aa16.32■□□□□ 0.2
CASP7-206ENST00000429617 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
CASP7-206ENST00000429617 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
CASP7-206ENST00000429617 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
CASP7-206ENST00000429617 C4BP0C0L5 1744 aa16.3■□□□□ 0.2
CASP7-206ENST00000429617 CCDC184Q52MB2 194 aa16.29■□□□□ 0.2
CASP7-206ENST00000429617 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
CASP7-206ENST00000429617 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
CASP7-206ENST00000429617 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
CASP7-206ENST00000429617 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
CASP7-206ENST00000429617 MSH5O43196 834 aa16.28■□□□□ 0.2
CASP7-206ENST00000429617 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
CASP7-206ENST00000429617 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
CASP7-206ENST00000429617 PPM1GO15355 546 aaPredicted RBP16.27■□□□□ 0.2
CASP7-206ENST00000429617 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
CASP7-206ENST00000429617 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
CASP7-206ENST00000429617 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
CASP7-206ENST00000429617 PIGBQ92521 554 aa16.27■□□□□ 0.2
CASP7-206ENST00000429617 EYA1Q99502 592 aa16.27■□□□□ 0.2
CASP7-206ENST00000429617 UBR3Q6ZT12 1888 aa16.27■□□□□ 0.19
CASP7-206ENST00000429617 POLKQ9UBT6 870 aa16.26■□□□□ 0.19
CASP7-206ENST00000429617 SMIM5Q71RC9 77 aa16.25■□□□□ 0.19
CASP7-206ENST00000429617 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms