RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
LINC00887-203ENST00000429578 TCP11L2Q8N4U5 519 aa22.54■■□□□ 1.2
LINC00887-203ENST00000429578 PHACTR3Q96KR7 559 aa22.54■■□□□ 1.2
LINC00887-203ENST00000429578 EP400Q96L91 3159 aa22.53■■□□□ 1.2
LINC00887-203ENST00000429578 PKD1L3Q7Z443 1732 aa22.52■■□□□ 1.2
LINC00887-203ENST00000429578 PLEKHG2Q9H7P9 1386 aa22.51■■□□□ 1.19
LINC00887-203ENST00000429578 VIRMAQ69YN4 1812 aaKnown RBP22.51■■□□□ 1.19
LINC00887-203ENST00000429578 SENP3-EIF4A1A0A087X0R7 540 aa22.51■■□□□ 1.19
LINC00887-203ENST00000429578 A0A0G2JS52 829 aa22.51■■□□□ 1.19
LINC00887-203ENST00000429578 ONECUT3O60422 494 aaPredicted RBP22.51■■□□□ 1.19
LINC00887-203ENST00000429578 MYT1Q01538 1121 aa22.51■■□□□ 1.19
LINC00887-203ENST00000429578 NGEFQ8N5V2 710 aa22.51■■□□□ 1.19
LINC00887-203ENST00000429578 RAPGEF4Q8WZA2 1011 aa22.51■■□□□ 1.19
LINC00887-203ENST00000429578 MEGF6O75095 1541 aa22.5■■□□□ 1.19
LINC00887-203ENST00000429578 CCDC125Q86Z20 511 aa22.5■■□□□ 1.19
LINC00887-203ENST00000429578 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
LINC00887-203ENST00000429578 SPATA31A1Q5TZJ5 1347 aa22.49■■□□□ 1.19
LINC00887-203ENST00000429578 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
LINC00887-203ENST00000429578 FAM98CQ17RN3 349 aaKnown RBP22.48■■□□□ 1.19
LINC00887-203ENST00000429578 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
LINC00887-203ENST00000429578 USP35Q9P2H5 1018 aa22.48■■□□□ 1.19
LINC00887-203ENST00000429578 SPATA31A5Q5VU36 1347 aa22.48■■□□□ 1.19
LINC00887-203ENST00000429578 ZBED9Q6R2W3 1325 aa22.48■■□□□ 1.19
LINC00887-203ENST00000429578 SPATA31A7Q8IWB4 1347 aa22.48■■□□□ 1.19
LINC00887-203ENST00000429578 TATP17735 454 aaPredicted RBP22.48■■□□□ 1.19
LINC00887-203ENST00000429578 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
LINC00887-203ENST00000429578 RRP7AQ9Y3A4 280 aaKnown RBP22.48■■□□□ 1.19
LINC00887-203ENST00000429578 SALL2Q9Y467 1007 aaPredicted RBP22.47■■□□□ 1.19
LINC00887-203ENST00000429578 SHANK3Q9BYB0 1731 aa22.46■■□□□ 1.19
LINC00887-203ENST00000429578 IL2RBP14784 551 aa22.46■■□□□ 1.19
LINC00887-203ENST00000429578 NEUROD2Q15784 382 aa22.46■■□□□ 1.19
LINC00887-203ENST00000429578 MTHFSDQ2M296 383 aaKnown RBP22.46■■□□□ 1.19
LINC00887-203ENST00000429578 AMOTQ4VCS5 1084 aa22.46■■□□□ 1.19
LINC00887-203ENST00000429578 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
LINC00887-203ENST00000429578 THRAP3Q9Y2W1 955 aaKnown RBP22.46■■□□□ 1.19
LINC00887-203ENST00000429578 OVOS2A0A0G2JMS6 1433 aa22.46■■□□□ 1.19
LINC00887-203ENST00000429578 PLEKHO1Q53GL0 409 aaPredicted RBP22.45■■□□□ 1.19
LINC00887-203ENST00000429578 GAS2L2Q8NHY3 880 aa22.45■■□□□ 1.19
LINC00887-203ENST00000429578 RIPK4P57078 832 aa22.45■■□□□ 1.18
LINC00887-203ENST00000429578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.45■■□□□ 1.18
LINC00887-203ENST00000429578 DISP2A7MBM2 1401 aa22.45■■□□□ 1.18
LINC00887-203ENST00000429578 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
LINC00887-203ENST00000429578 ZNF521Q96K83 1311 aa22.41■■□□□ 1.18
LINC00887-203ENST00000429578 BARGINQ6ZT62 677 aa22.41■■□□□ 1.18
LINC00887-203ENST00000429578 TRIM35Q9UPQ4 493 aa22.41■■□□□ 1.18
LINC00887-203ENST00000429578 SPG7Q9UQ90 795 aa22.41■■□□□ 1.18
LINC00887-203ENST00000429578 WWC1Q8IX03 1113 aa22.4■■□□□ 1.18
LINC00887-203ENST00000429578 CDCA7Q9BWT1 371 aaPredicted RBP22.4■■□□□ 1.18
LINC00887-203ENST00000429578 LMOD3Q0VAK6 560 aa22.4■■□□□ 1.18
LINC00887-203ENST00000429578 SF3B2Q13435 895 aaKnown RBP22.4■■□□□ 1.18
LINC00887-203ENST00000429578 SCN11AQ9UI33 1791 aa22.39■■□□□ 1.18
LINC00887-203ENST00000429578 LRRC37A3O60309 1634 aa22.39■■□□□ 1.18
LINC00887-203ENST00000429578 ZNF530Q6P9A1 599 aaPredicted RBP22.39■■□□□ 1.17
LINC00887-203ENST00000429578 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
LINC00887-203ENST00000429578 ZCRB1Q8TBF4 217 aaKnown RBP22.38■■□□□ 1.17
LINC00887-203ENST00000429578 ADAMTS7Q9UKP4 1686 aa22.38■■□□□ 1.17
LINC00887-203ENST00000429578 GNAT3A8MTJ3 354 aa22.37■■□□□ 1.17
LINC00887-203ENST00000429578 HTATSF1O43719 755 aaKnown RBP22.37■■□□□ 1.17
LINC00887-203ENST00000429578 AKAP4Q5JQC9 854 aa22.37■■□□□ 1.17
LINC00887-203ENST00000429578 C1orf141Q5JVX7 400 aa22.37■■□□□ 1.17
LINC00887-203ENST00000429578 THSD7AQ9UPZ6 1657 aa22.36■■□□□ 1.17
LINC00887-203ENST00000429578 PCDH11XQ9BZA7 1347 aa22.35■■□□□ 1.17
LINC00887-203ENST00000429578 PCDH11YQ9BZA8 1340 aa22.35■■□□□ 1.17
LINC00887-203ENST00000429578 DEFB132Q7Z7B7 95 aa22.34■■□□□ 1.17
LINC00887-203ENST00000429578 WDR63Q8IWG1 891 aa22.34■■□□□ 1.17
LINC00887-203ENST00000429578 IFNL2Q8IZJ0 200 aa22.34■■□□□ 1.17
LINC00887-203ENST00000429578 RTF1Q92541 710 aaKnown RBP22.34■■□□□ 1.17
LINC00887-203ENST00000429578 TNS2Q63HR2 1409 aa22.34■■□□□ 1.17
LINC00887-203ENST00000429578 PHKG2P15735 406 aa22.34■■□□□ 1.17
LINC00887-203ENST00000429578 PDE3BQ13370 1112 aa22.34■■□□□ 1.17
LINC00887-203ENST00000429578 EXOC5O00471 708 aa22.33■■□□□ 1.17
LINC00887-203ENST00000429578 CYP27B1O15528 508 aa22.33■■□□□ 1.17
LINC00887-203ENST00000429578 GOLGA2Q08379 1002 aa22.33■■□□□ 1.17
LINC00887-203ENST00000429578 FAM182BQ5T319 152 aa22.33■■□□□ 1.17
LINC00887-203ENST00000429578 SIPA1L3O60292 1781 aaPredicted RBP22.32■■□□□ 1.16
LINC00887-203ENST00000429578 DCTN1Q14203 1278 aa22.31■■□□□ 1.16
LINC00887-203ENST00000429578 MCM10Q7L590 875 aa22.31■■□□□ 1.16
LINC00887-203ENST00000429578 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
LINC00887-203ENST00000429578 DDB1Q16531 1140 aa22.31■■□□□ 1.16
LINC00887-203ENST00000429578 IL17REQ8NFR9 667 aa22.3■■□□□ 1.16
LINC00887-203ENST00000429578 THUMPD2Q9BTF0 503 aaKnown RBP22.3■■□□□ 1.16
LINC00887-203ENST00000429578 KAT6BQ8WYB5 2073 aa22.3■■□□□ 1.16
LINC00887-203ENST00000429578 CEMIPQ8WUJ3 1361 aa22.3■■□□□ 1.16
LINC00887-203ENST00000429578 HSP90AB1P08238 724 aaKnown RBP22.29■■□□□ 1.16
LINC00887-203ENST00000429578 DDX54Q8TDD1 881 aaKnown RBP22.29■■□□□ 1.16
LINC00887-203ENST00000429578 IL16Q14005 1332 aa22.29■■□□□ 1.16
LINC00887-203ENST00000429578 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
LINC00887-203ENST00000429578 CDCA7LQ96GN5 454 aa22.28■■□□□ 1.16
LINC00887-203ENST00000429578 BAG6P46379 1132 aa22.28■■□□□ 1.16
LINC00887-203ENST00000429578 KDM6AO15550 1401 aaPredicted RBP22.27■■□□□ 1.16
LINC00887-203ENST00000429578 TOGARAM1Q9Y4F4 1720 aa22.27■■□□□ 1.16
LINC00887-203ENST00000429578 ITGB4P16144 1822 aa22.27■■□□□ 1.16
LINC00887-203ENST00000429578 NKX1-1Q15270 411 aaPredicted RBP22.27■■□□□ 1.16
LINC00887-203ENST00000429578 DCAF5Q96JK2 942 aa22.27■■□□□ 1.16
LINC00887-203ENST00000429578 LGR6Q9HBX8 967 aa22.27■■□□□ 1.16
LINC00887-203ENST00000429578 E9PSI1 815 aa22.26■■□□□ 1.15
LINC00887-203ENST00000429578 RNMTO43148 476 aaKnown RBP22.26■■□□□ 1.15
LINC00887-203ENST00000429578 SLFN5Q08AF3 891 aa22.26■■□□□ 1.15
LINC00887-203ENST00000429578 SPINK5Q9NQ38 1064 aaPredicted RBP22.26■■□□□ 1.15
LINC00887-203ENST00000429578 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms