RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 U2AF2P26368 475 aaKnown RBP eCLIP17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 GPATCH11Q8N954 259 aa17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 FAM177BA6PVY3 158 aa17.46■□□□□ 0.38
SYNGAP1-203ENST00000428982 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.38
SYNGAP1-203ENST00000428982 OGFRQ9NZT2 677 aa17.46■□□□□ 0.38
SYNGAP1-203ENST00000428982 FRMPD1Q5SYB0 1578 aa17.45■□□□□ 0.38
SYNGAP1-203ENST00000428982 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
SYNGAP1-203ENST00000428982 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
SYNGAP1-203ENST00000428982 MPNDQ8N594 471 aa17.44■□□□□ 0.38
SYNGAP1-203ENST00000428982 CLTCQ00610 1675 aaKnown RBP17.44■□□□□ 0.38
SYNGAP1-203ENST00000428982 TEX35Q5T0J7 233 aa17.44■□□□□ 0.38
SYNGAP1-203ENST00000428982 SEC24BO95487 1268 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 CSB-PGBD3P0DP91 1061 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 ZBTB9Q96C00 473 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 ABCC11Q96J66 1382 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 LTKP29376 864 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 ABTB2Q8N961 1025 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 VWDEQ8N2E2 1590 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 ADGRB3O60242 1522 aa17.43■□□□□ 0.38
SYNGAP1-203ENST00000428982 IGHDP01880 384 aa17.42■□□□□ 0.38
SYNGAP1-203ENST00000428982 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
SYNGAP1-203ENST00000428982 ANKRD36BQ8N2N9 1353 aa17.42■□□□□ 0.38
SYNGAP1-203ENST00000428982 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
SYNGAP1-203ENST00000428982 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
SYNGAP1-203ENST00000428982 ZFYVE9O95405 1425 aa17.42■□□□□ 0.38
SYNGAP1-203ENST00000428982 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
SYNGAP1-203ENST00000428982 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
SYNGAP1-203ENST00000428982 TULP1O00294 542 aaPredicted RBP17.4■□□□□ 0.38
SYNGAP1-203ENST00000428982 TPRNQ4KMQ1 711 aa17.4■□□□□ 0.38
SYNGAP1-203ENST00000428982 A2ML1A8K2U0 1454 aa17.4■□□□□ 0.38
SYNGAP1-203ENST00000428982 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
SYNGAP1-203ENST00000428982 BANK1Q8NDB2 785 aa17.4■□□□□ 0.38
SYNGAP1-203ENST00000428982 KLHL40Q2TBA0 621 aa17.4■□□□□ 0.38
SYNGAP1-203ENST00000428982 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
SYNGAP1-203ENST00000428982 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
SYNGAP1-203ENST00000428982 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
SYNGAP1-203ENST00000428982 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
SYNGAP1-203ENST00000428982 CWC15Q9P013 229 aaKnown RBP17.38■□□□□ 0.37
SYNGAP1-203ENST00000428982 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
SYNGAP1-203ENST00000428982 KCNA6P17658 529 aa17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 GPS2Q13227 327 aa17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 NOLC1Q14978 699 aaKnown RBP eCLIP17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 PHF8Q9UPP1 1060 aa17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 PHF14O94880 888 aa17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 DEF6Q9H4E7 631 aa17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 MADDQ8WXG6 1647 aa17.37■□□□□ 0.37
SYNGAP1-203ENST00000428982 IL16Q14005 1332 aa17.36■□□□□ 0.37
SYNGAP1-203ENST00000428982 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
SYNGAP1-203ENST00000428982 KRT222Q8N1A0 295 aa17.36■□□□□ 0.37
SYNGAP1-203ENST00000428982 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
SYNGAP1-203ENST00000428982 EXOSC9Q06265 439 aaKnown RBP17.36■□□□□ 0.37
SYNGAP1-203ENST00000428982 CTR9Q6PD62 1173 aa17.36■□□□□ 0.37
SYNGAP1-203ENST00000428982 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
SYNGAP1-203ENST00000428982 CALRP27797 417 aaKnown RBP17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 HSPA2P54652 639 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 SIRT1Q96EB6 747 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 A0A0G2JS52 829 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 DRC7Q8IY82 874 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 NME9Q86XW9 330 aa17.35■□□□□ 0.37
SYNGAP1-203ENST00000428982 NUCB2P80303 420 aa17.34■□□□□ 0.37
SYNGAP1-203ENST00000428982 CHMP4CQ96CF2 233 aa17.34■□□□□ 0.37
SYNGAP1-203ENST00000428982 ACEP12821 1306 aa17.34■□□□□ 0.37
SYNGAP1-203ENST00000428982 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.37
SYNGAP1-203ENST00000428982 MYCBPQ99417 103 aaPredicted RBP17.33■□□□□ 0.37
SYNGAP1-203ENST00000428982 RASSF4Q9H2L5 321 aa17.33■□□□□ 0.37
SYNGAP1-203ENST00000428982 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 RSPH14Q9UHP6 348 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 REREQ9P2R6 1566 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 METP08581 1390 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 PRPF40AO75400 957 aaKnown RBP17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 HMOX1P09601 288 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 GNAI1P63096 354 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 CARD14Q9BXL6 1004 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 EFCC1Q9HA90 598 aa17.33■□□□□ 0.36
SYNGAP1-203ENST00000428982 TNNT1P13805 278 aa17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 ZSCAN23Q3MJ62 389 aa17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 ZNF592Q92610 1267 aa17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 TMX1Q9H3N1 280 aa17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 PREX1Q8TCU6 1659 aa17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 GTF2F1P35269 517 aaKnown RBP eCLIP17.32■□□□□ 0.361e-7■■■■□ 26.1
SYNGAP1-203ENST00000428982 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
SYNGAP1-203ENST00000428982 TSPY26PQ9H489 355 aa17.31■□□□□ 0.36
SYNGAP1-203ENST00000428982 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
SYNGAP1-203ENST00000428982 SYCE3A1L190 88 aa17.3■□□□□ 0.36
SYNGAP1-203ENST00000428982 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
SYNGAP1-203ENST00000428982 A0A1W2PP64 1363 aa17.3■□□□□ 0.36
SYNGAP1-203ENST00000428982 MCCP23508 829 aa17.3■□□□□ 0.36
SYNGAP1-203ENST00000428982 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
SYNGAP1-203ENST00000428982 PCDHB15Q9Y5E8 787 aa17.3■□□□□ 0.36
SYNGAP1-203ENST00000428982 FYB1O15117 783 aa17.29■□□□□ 0.36
SYNGAP1-203ENST00000428982 SSFA2P28290 1259 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms