RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ADAMTS2O95450 1211 aa11.65□□□□□ -0.54
SMC6-204ENST00000428868 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
SMC6-204ENST00000428868 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
SMC6-204ENST00000428868 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
SMC6-204ENST00000428868 NLRP2Q9NX02 1062 aa11.65□□□□□ -0.54
SMC6-204ENST00000428868 WDR17Q8IZU2 1322 aa11.64□□□□□ -0.55
SMC6-204ENST00000428868 NEFMP07197 916 aa11.64□□□□□ -0.55
SMC6-204ENST00000428868 WDR63Q8IWG1 891 aa11.64□□□□□ -0.55
SMC6-204ENST00000428868 NGEFQ8N5V2 710 aa11.64□□□□□ -0.55
SMC6-204ENST00000428868 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
SMC6-204ENST00000428868 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
SMC6-204ENST00000428868 JCADQ9P266 1359 aa11.64□□□□□ -0.55
SMC6-204ENST00000428868 LARP1Q6PKG0 1096 aaKnown RBP11.63□□□□□ -0.55
SMC6-204ENST00000428868 MCM10Q7L590 875 aa11.63□□□□□ -0.55
SMC6-204ENST00000428868 TSR2Q969E8 191 aaKnown RBP11.63□□□□□ -0.55
SMC6-204ENST00000428868 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
SMC6-204ENST00000428868 SLIT2O94813 1529 aa11.63□□□□□ -0.55
SMC6-204ENST00000428868 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
SMC6-204ENST00000428868 OVOS2A0A0G2JMS6 1433 aa11.62□□□□□ -0.55
SMC6-204ENST00000428868 CRB1P82279 1406 aa11.62□□□□□ -0.55
SMC6-204ENST00000428868 E9PSI1 815 aa11.62□□□□□ -0.55
SMC6-204ENST00000428868 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
SMC6-204ENST00000428868 MAP3K5Q99683 1374 aa11.62□□□□□ -0.55
SMC6-204ENST00000428868 C5P01031 1676 aa11.62□□□□□ -0.55
SMC6-204ENST00000428868 DOT1LQ8TEK3 1739 aa11.61□□□□□ -0.55
SMC6-204ENST00000428868 TOM1L2Q6ZVM7 507 aa11.61□□□□□ -0.55
SMC6-204ENST00000428868 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
SMC6-204ENST00000428868 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
SMC6-204ENST00000428868 ZNF530Q6P9A1 599 aaPredicted RBP11.6□□□□□ -0.55
SMC6-204ENST00000428868 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
SMC6-204ENST00000428868 DISP2A7MBM2 1401 aa11.6□□□□□ -0.55
SMC6-204ENST00000428868 KDM6AO15550 1401 aaPredicted RBP11.6□□□□□ -0.55
SMC6-204ENST00000428868 IL16Q14005 1332 aa11.6□□□□□ -0.55
SMC6-204ENST00000428868 ZNF853P0CG23 659 aa11.59□□□□□ -0.55
SMC6-204ENST00000428868 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
SMC6-204ENST00000428868 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
SMC6-204ENST00000428868 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
SMC6-204ENST00000428868 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
SMC6-204ENST00000428868 GNAT3A8MTJ3 354 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 TATP17735 454 aaPredicted RBP11.58□□□□□ -0.56
SMC6-204ENST00000428868 EVA1CP58658 441 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 EXOSC9Q06265 439 aaKnown RBP11.58□□□□□ -0.56
SMC6-204ENST00000428868 LMOD3Q0VAK6 560 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 PLEKHO1Q53GL0 409 aaPredicted RBP11.58□□□□□ -0.56
SMC6-204ENST00000428868 IL17REQ8NFR9 667 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 CARD10Q9BWT7 1032 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 LGR6Q9HBX8 967 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 GLI3P10071 1580 aa11.58□□□□□ -0.56
SMC6-204ENST00000428868 MRC1P22897 1456 aa11.57□□□□□ -0.56
SMC6-204ENST00000428868 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
SMC6-204ENST00000428868 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
SMC6-204ENST00000428868 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
SMC6-204ENST00000428868 MBIPQ9NS73 344 aa11.57□□□□□ -0.56
SMC6-204ENST00000428868 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
SMC6-204ENST00000428868 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
SMC6-204ENST00000428868 THSD7AQ9UPZ6 1657 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 CYP27B1O15528 508 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 MPRIPQ6WCQ1 1025 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 C8orf37Q96NL8 207 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 MIS18AQ9NYP9 233 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 SPATA31A6Q5VVP1 1343 aa11.56□□□□□ -0.56
SMC6-204ENST00000428868 GNAI1P63096 354 aa11.55□□□□□ -0.56
SMC6-204ENST00000428868 KRT24Q2M2I5 525 aa11.55□□□□□ -0.56
SMC6-204ENST00000428868 AMOTQ4VCS5 1084 aa11.55□□□□□ -0.56
SMC6-204ENST00000428868 AKAP4Q5JQC9 854 aa11.55□□□□□ -0.56
SMC6-204ENST00000428868 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
SMC6-204ENST00000428868 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
SMC6-204ENST00000428868 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 RNMTO43148 476 aaKnown RBP11.54□□□□□ -0.56
SMC6-204ENST00000428868 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
SMC6-204ENST00000428868 PLIN1O60240 522 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 BCAR3O75815 825 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 IL2RBP14784 551 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 PHKG2P15735 406 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 TSPYL6Q8N831 410 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 SPATA31A1Q5TZJ5 1347 aa11.54□□□□□ -0.56
SMC6-204ENST00000428868 CHL1O00533 1208 aa11.53□□□□□ -0.56
SMC6-204ENST00000428868 RRP1P56182 461 aaKnown RBP11.53□□□□□ -0.56
SMC6-204ENST00000428868 FKBP8Q14318 412 aa11.53□□□□□ -0.56
SMC6-204ENST00000428868 C1orf141Q5JVX7 400 aa11.53□□□□□ -0.56
SMC6-204ENST00000428868 C8orf58Q8NAV2 365 aa11.53□□□□□ -0.56
SMC6-204ENST00000428868 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMC6-204ENST00000428868 N4BP2Q86UW6 1770 aaPredicted RBP11.53□□□□□ -0.56
SMC6-204ENST00000428868 SPATA31A5Q5VU36 1347 aa11.53□□□□□ -0.56
SMC6-204ENST00000428868 SPATA31A7Q8IWB4 1347 aa11.53□□□□□ -0.56
SMC6-204ENST00000428868 TNS2Q63HR2 1409 aa11.52□□□□□ -0.56
SMC6-204ENST00000428868 CALD1Q05682 793 aaKnown RBP11.52□□□□□ -0.57
SMC6-204ENST00000428868 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.57
SMC6-204ENST00000428868 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.57
SMC6-204ENST00000428868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.573e-8■■■■■ 29.8
SMC6-204ENST00000428868 SPG7Q9UQ90 795 aa11.52□□□□□ -0.57
SMC6-204ENST00000428868 ELL2O00472 640 aaPredicted RBP11.51□□□□□ -0.57
SMC6-204ENST00000428868 KCNQ3O43525 872 aa11.51□□□□□ -0.57
SMC6-204ENST00000428868 RARSP54136 660 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms