RNA–Protein interactions for RNA: ENST00000428134.1

LINC02088-201, Transcript of long intergenic non-protein coding RNA 2088, humanhuman

TSL 3 BASIC

Gene LINC02088, Length 620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02088-201ENST00000428134 PRKAR2BP31323 418 aa11.12□□□□□ -0.63
LINC02088-201ENST00000428134 RBM6P78332 1123 aaKnown RBP11.12□□□□□ -0.63
LINC02088-201ENST00000428134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC02088-201ENST00000428134 FAM98CQ17RN3 349 aaKnown RBP11.11□□□□□ -0.63
LINC02088-201ENST00000428134 FAM9BQ8IZU0 186 aa11.11□□□□□ -0.63
LINC02088-201ENST00000428134 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
LINC02088-201ENST00000428134 CCDC9Q9Y3X0 531 aaKnown RBP11.11□□□□□ -0.63
LINC02088-201ENST00000428134 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
LINC02088-201ENST00000428134 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
LINC02088-201ENST00000428134 MTHFSDQ2M296 383 aaKnown RBP11.1□□□□□ -0.63
LINC02088-201ENST00000428134 CCDC146Q8IYE0 955 aa11.1□□□□□ -0.63
LINC02088-201ENST00000428134 RAPGEF4Q8WZA2 1011 aa11.1□□□□□ -0.63
LINC02088-201ENST00000428134 RUNDC1Q96C34 613 aa11.1□□□□□ -0.63
LINC02088-201ENST00000428134 EP400Q96L91 3159 aa11.1□□□□□ -0.63
LINC02088-201ENST00000428134 WNK3Q9BYP7 1800 aa11.09□□□□□ -0.63
LINC02088-201ENST00000428134 CYP27B1O15528 508 aa11.09□□□□□ -0.63
LINC02088-201ENST00000428134 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
LINC02088-201ENST00000428134 AMOTQ4VCS5 1084 aa11.08□□□□□ -0.64
LINC02088-201ENST00000428134 PLEKHO1Q53GL0 409 aaPredicted RBP11.08□□□□□ -0.64
LINC02088-201ENST00000428134 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
LINC02088-201ENST00000428134 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
LINC02088-201ENST00000428134 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
LINC02088-201ENST00000428134 PARP4Q9UKK3 1724 aaKnown RBP11.08□□□□□ -0.64
LINC02088-201ENST00000428134 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
LINC02088-201ENST00000428134 SHANK3Q9BYB0 1731 aa11.07□□□□□ -0.64
LINC02088-201ENST00000428134 EXOC5O00471 708 aa11.07□□□□□ -0.64
LINC02088-201ENST00000428134 APAF1O14727 1248 aa11.07□□□□□ -0.64
LINC02088-201ENST00000428134 TMPOP42166 694 aaKnown RBP11.07□□□□□ -0.64
LINC02088-201ENST00000428134 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
LINC02088-201ENST00000428134 NFE2L2Q16236 605 aa11.07□□□□□ -0.64
LINC02088-201ENST00000428134 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
LINC02088-201ENST00000428134 MARCH10Q8NA82 808 aaPredicted RBP11.07□□□□□ -0.64
LINC02088-201ENST00000428134 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
LINC02088-201ENST00000428134 LRRC37A3O60309 1634 aa11.06□□□□□ -0.64
LINC02088-201ENST00000428134 PHKG2P15735 406 aa11.06□□□□□ -0.64
LINC02088-201ENST00000428134 DDB1Q16531 1140 aa11.06□□□□□ -0.64
LINC02088-201ENST00000428134 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
LINC02088-201ENST00000428134 AKAP4Q5JQC9 854 aa11.05□□□□□ -0.64
LINC02088-201ENST00000428134 ZNF530Q6P9A1 599 aaPredicted RBP11.05□□□□□ -0.64
LINC02088-201ENST00000428134 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
LINC02088-201ENST00000428134 IFNL2Q8IZJ0 200 aa11.04□□□□□ -0.64
LINC02088-201ENST00000428134 IL17REQ8NFR9 667 aa11.04□□□□□ -0.64
LINC02088-201ENST00000428134 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
LINC02088-201ENST00000428134 BRWD3Q6RI45 1802 aa11.04□□□□□ -0.64
LINC02088-201ENST00000428134 PCDH11XQ9BZA7 1347 aa11.04□□□□□ -0.64
LINC02088-201ENST00000428134 PCDH11YQ9BZA8 1340 aa11.04□□□□□ -0.64
LINC02088-201ENST00000428134 MAPK8IP3Q9UPT6 1336 aa11.04□□□□□ -0.64
LINC02088-201ENST00000428134 BCL9O00512 1426 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
LINC02088-201ENST00000428134 HTATSF1O43719 755 aaKnown RBP11.03□□□□□ -0.64
LINC02088-201ENST00000428134 RIPK4P57078 832 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 CCDC27Q2M243 656 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
LINC02088-201ENST00000428134 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 ADAMTS7Q9UKP4 1686 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
LINC02088-201ENST00000428134 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.65
LINC02088-201ENST00000428134 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
LINC02088-201ENST00000428134 NGEFQ8N5V2 710 aa11.02□□□□□ -0.65
LINC02088-201ENST00000428134 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
LINC02088-201ENST00000428134 NEFMP07197 916 aa11.01□□□□□ -0.65
LINC02088-201ENST00000428134 PDE3BQ13370 1112 aa11.01□□□□□ -0.65
LINC02088-201ENST00000428134 MPRIPQ6WCQ1 1025 aa11.01□□□□□ -0.65
LINC02088-201ENST00000428134 KRT27Q7Z3Y8 459 aa11.01□□□□□ -0.65
LINC02088-201ENST00000428134 DCAF5Q96JK2 942 aa11.01□□□□□ -0.65
LINC02088-201ENST00000428134 DLG5Q8TDM6 1919 aa11□□□□□ -0.65
LINC02088-201ENST00000428134 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
LINC02088-201ENST00000428134 DCTN1Q14203 1278 aa11□□□□□ -0.65
LINC02088-201ENST00000428134 C1orf141Q5JVX7 400 aa11□□□□□ -0.65
LINC02088-201ENST00000428134 FAM182BQ5T319 152 aa11□□□□□ -0.65
LINC02088-201ENST00000428134 MCM10Q7L590 875 aa11□□□□□ -0.65
LINC02088-201ENST00000428134 WWC1Q8IX03 1113 aa11□□□□□ -0.65
LINC02088-201ENST00000428134 A0A0G2JS52 829 aa10.99□□□□□ -0.65
LINC02088-201ENST00000428134 ERVV-2B6SEH9 535 aa10.99□□□□□ -0.65
LINC02088-201ENST00000428134 MYT1Q01538 1121 aa10.99□□□□□ -0.65
LINC02088-201ENST00000428134 NEUROD2Q15784 382 aa10.99□□□□□ -0.65
LINC02088-201ENST00000428134 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
LINC02088-201ENST00000428134 MRC1P22897 1456 aa10.99□□□□□ -0.65
LINC02088-201ENST00000428134 TOGARAM1Q9Y4F4 1720 aa10.98□□□□□ -0.65
LINC02088-201ENST00000428134 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
LINC02088-201ENST00000428134 LRP5O75197 1615 aa10.98□□□□□ -0.65
LINC02088-201ENST00000428134 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
LINC02088-201ENST00000428134 ZNF853P0CG23 659 aa10.97□□□□□ -0.65
LINC02088-201ENST00000428134 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC02088-201ENST00000428134 FAM196AQ6ZSG2 479 aa10.97□□□□□ -0.65
LINC02088-201ENST00000428134 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
LINC02088-201ENST00000428134 WDR63Q8IWG1 891 aa10.97□□□□□ -0.65
LINC02088-201ENST00000428134 SLC52A2Q9HAB3 445 aa10.97□□□□□ -0.65
LINC02088-201ENST00000428134 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
LINC02088-201ENST00000428134 IL16Q14005 1332 aa10.96□□□□□ -0.65
LINC02088-201ENST00000428134 KCNQ2O43526 872 aa10.96□□□□□ -0.65
LINC02088-201ENST00000428134 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
LINC02088-201ENST00000428134 NFATC2IPQ8NCF5 419 aa10.96□□□□□ -0.65
LINC02088-201ENST00000428134 PIGBQ92521 554 aa10.96□□□□□ -0.65
LINC02088-201ENST00000428134 RTF1Q92541 710 aaKnown RBP10.96□□□□□ -0.65
LINC02088-201ENST00000428134 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
LINC02088-201ENST00000428134 ZBED9Q6R2W3 1325 aa10.95□□□□□ -0.66
LINC02088-201ENST00000428134 CHL1O00533 1208 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms