RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 NSD2O96028 1365 aa20.82■□□□□ 0.92
PHF1-204ENST00000427826 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
PHF1-204ENST00000427826 POLKQ9UBT6 870 aa20.81■□□□□ 0.92
PHF1-204ENST00000427826 MEGF6O75095 1541 aa20.81■□□□□ 0.92
PHF1-204ENST00000427826 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
PHF1-204ENST00000427826 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
PHF1-204ENST00000427826 SYTL4Q96C24 671 aaPredicted RBP20.78■□□□□ 0.92
PHF1-204ENST00000427826 SPON1Q9HCB6 807 aa20.78■□□□□ 0.92
PHF1-204ENST00000427826 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
PHF1-204ENST00000427826 PRIM1P49642 420 aaKnown RBP20.77■□□□□ 0.92
PHF1-204ENST00000427826 SLC15A2Q16348 729 aa20.77■□□□□ 0.92
PHF1-204ENST00000427826 RGPD2P0DJD1 1756 aa20.77■□□□□ 0.91
PHF1-204ENST00000427826 PCDH11XQ9BZA7 1347 aa20.77■□□□□ 0.91
PHF1-204ENST00000427826 PCDH11YQ9BZA8 1340 aa20.77■□□□□ 0.91
PHF1-204ENST00000427826 MORC1Q86VD1 984 aa20.76■□□□□ 0.91
PHF1-204ENST00000427826 SLC27A3Q5K4L6 730 aa20.75■□□□□ 0.91
PHF1-204ENST00000427826 KIF7Q2M1P5 1343 aa20.75■□□□□ 0.91
PHF1-204ENST00000427826 EYA1Q99502 592 aa20.74■□□□□ 0.91
PHF1-204ENST00000427826 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
PHF1-204ENST00000427826 NCAPD2Q15021 1401 aa20.73■□□□□ 0.91
PHF1-204ENST00000427826 SPG7Q9UQ90 795 aa20.73■□□□□ 0.91
PHF1-204ENST00000427826 ANKRD26Q9UPS8 1709 aa20.73■□□□□ 0.91
PHF1-204ENST00000427826 BTAF1O14981 1849 aa20.72■□□□□ 0.91
PHF1-204ENST00000427826 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.91
PHF1-204ENST00000427826 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
PHF1-204ENST00000427826 EIF4A2Q14240 407 aaKnown RBP20.71■□□□□ 0.91
PHF1-204ENST00000427826 PPP1R1BQ9UD71 204 aaPredicted RBP20.71■□□□□ 0.91
PHF1-204ENST00000427826 CYP27B1O15528 508 aa20.7■□□□□ 0.9
PHF1-204ENST00000427826 HMGB2P26583 209 aaKnown RBP20.7■□□□□ 0.9
PHF1-204ENST00000427826 LRRC4BQ9NT99 713 aa20.69■□□□□ 0.9
PHF1-204ENST00000427826 SHANK3Q9BYB0 1731 aa20.69■□□□□ 0.9
PHF1-204ENST00000427826 AMER1Q5JTC6 1135 aaPredicted RBP20.68■□□□□ 0.9
PHF1-204ENST00000427826 NKX1-1Q15270 411 aaPredicted RBP20.67■□□□□ 0.9
PHF1-204ENST00000427826 PLEKHG2Q9H7P9 1386 aa20.67■□□□□ 0.9
PHF1-204ENST00000427826 ZBTB7AO95365 584 aa20.66■□□□□ 0.9
PHF1-204ENST00000427826 PDGFDQ9GZP0 370 aaPredicted RBP20.66■□□□□ 0.9
PHF1-204ENST00000427826 DOT1LQ8TEK3 1739 aa20.66■□□□□ 0.9
PHF1-204ENST00000427826 IGSF1Q8N6C5 1336 aa20.65■□□□□ 0.9
PHF1-204ENST00000427826 AKT1S1Q96B36 256 aa20.65■□□□□ 0.9
PHF1-204ENST00000427826 MTFR1LQ9H019 292 aa20.65■□□□□ 0.9
PHF1-204ENST00000427826 CCNL1Q9UK58 526 aaPredicted RBP20.65■□□□□ 0.9
PHF1-204ENST00000427826 MPRIPQ6WCQ1 1025 aa20.64■□□□□ 0.89
PHF1-204ENST00000427826 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.89
PHF1-204ENST00000427826 CASZ1Q86V15 1759 aa20.64■□□□□ 0.89
PHF1-204ENST00000427826 PER1O15534 1290 aaPredicted RBP20.63■□□□□ 0.89
PHF1-204ENST00000427826 ZNF827Q17R98 1081 aa20.63■□□□□ 0.89
PHF1-204ENST00000427826 SMARCC1Q92922 1105 aaPredicted RBP20.63■□□□□ 0.89
PHF1-204ENST00000427826 PAPPAQ13219 1627 aa20.63■□□□□ 0.89
PHF1-204ENST00000427826 TFCP2L1Q9NZI6 479 aa20.62■□□□□ 0.89
PHF1-204ENST00000427826 ATF5Q9Y2D1 282 aaPredicted RBP20.62■□□□□ 0.89
PHF1-204ENST00000427826 PKD1L3Q7Z443 1732 aa20.61■□□□□ 0.89
PHF1-204ENST00000427826 PHKG2P15735 406 aa20.61■□□□□ 0.89
PHF1-204ENST00000427826 PTGER2P43116 358 aa20.6■□□□□ 0.89
PHF1-204ENST00000427826 KCNQ4P56696 695 aa20.6■□□□□ 0.89
PHF1-204ENST00000427826 AMOTQ4VCS5 1084 aa20.6■□□□□ 0.89
PHF1-204ENST00000427826 PLEKHO1Q53GL0 409 aaPredicted RBP20.6■□□□□ 0.89
PHF1-204ENST00000427826 SLC16A10Q8TF71 515 aa20.6■□□□□ 0.89
PHF1-204ENST00000427826 PIGBQ92521 554 aa20.59■□□□□ 0.89
PHF1-204ENST00000427826 PALLDQ8WX93 1383 aa20.59■□□□□ 0.89
PHF1-204ENST00000427826 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.89
PHF1-204ENST00000427826 HSP90AB1P08238 724 aaKnown RBP20.58■□□□□ 0.89
PHF1-204ENST00000427826 TMOD3Q9NYL9 352 aa20.58■□□□□ 0.89
PHF1-204ENST00000427826 LY75O60449 1722 aa20.57■□□□□ 0.88
PHF1-204ENST00000427826 IL13P35225 146 aa20.57■□□□□ 0.88
PHF1-204ENST00000427826 CC2D1BQ5T0F9 858 aaKnown RBP20.57■□□□□ 0.88
PHF1-204ENST00000427826 NPC1L1Q9UHC9 1359 aa20.57■□□□□ 0.88
PHF1-204ENST00000427826 MTHFSP49914 203 aa20.56■□□□□ 0.88
PHF1-204ENST00000427826 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
PHF1-204ENST00000427826 PNPLA7Q6ZV29 1317 aa20.55■□□□□ 0.88
PHF1-204ENST00000427826 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
PHF1-204ENST00000427826 SGIP1Q9BQI5 828 aa20.55■□□□□ 0.88
PHF1-204ENST00000427826 ERVV-2B6SEH9 535 aa20.54■□□□□ 0.88
PHF1-204ENST00000427826 C1orf141Q5JVX7 400 aa20.53■□□□□ 0.88
PHF1-204ENST00000427826 ZNF530Q6P9A1 599 aaPredicted RBP20.53■□□□□ 0.88
PHF1-204ENST00000427826 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
PHF1-204ENST00000427826 FLAD1Q8NFF5 587 aa20.53■□□□□ 0.88
PHF1-204ENST00000427826 ARXQ96QS3 562 aa20.53■□□□□ 0.88
PHF1-204ENST00000427826 KDRP35968 1356 aa20.52■□□□□ 0.88
PHF1-204ENST00000427826 POLD1P28340 1107 aa20.52■□□□□ 0.88
PHF1-204ENST00000427826 TOGARAM1Q9Y4F4 1720 aa20.51■□□□□ 0.87
PHF1-204ENST00000427826 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
PHF1-204ENST00000427826 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
PHF1-204ENST00000427826 MSH5O43196 834 aa20.5■□□□□ 0.87
PHF1-204ENST00000427826 DIAPH1O60610 1272 aaKnown RBP20.5■□□□□ 0.87
PHF1-204ENST00000427826 SIK1P57059 783 aa20.5■□□□□ 0.87
PHF1-204ENST00000427826 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
PHF1-204ENST00000427826 ITGB4P16144 1822 aa20.49■□□□□ 0.87
PHF1-204ENST00000427826 FHDC1Q9C0D6 1143 aaPredicted RBP20.49■□□□□ 0.87
PHF1-204ENST00000427826 COL23A1Q86Y22 540 aaPredicted RBP20.48■□□□□ 0.87
PHF1-204ENST00000427826 AK7Q96M32 723 aa20.48■□□□□ 0.87
PHF1-204ENST00000427826 SYT17Q9BSW7 474 aa20.48■□□□□ 0.87
PHF1-204ENST00000427826 ATG3Q9NT62 314 aa20.48■□□□□ 0.87
PHF1-204ENST00000427826 CABP4P57796 275 aa20.47■□□□□ 0.87
PHF1-204ENST00000427826 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
PHF1-204ENST00000427826 ATP6V1AP38606 617 aa20.46■□□□□ 0.87
PHF1-204ENST00000427826 AKAP4Q5JQC9 854 aa20.45■□□□□ 0.86
PHF1-204ENST00000427826 MAP3K5Q99683 1374 aa20.45■□□□□ 0.86
PHF1-204ENST00000427826 C5P01031 1676 aa20.45■□□□□ 0.86
PHF1-204ENST00000427826 HMOX1P09601 288 aa20.44■□□□□ 0.86
PHF1-204ENST00000427826 KDM6AO15550 1401 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms