RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 MAP3K19Q56UN5 1328 aa23.87■■□□□ 1.41
PSMD4-203ENST00000427779 PNPLA7Q6ZV29 1317 aa23.87■■□□□ 1.41
PSMD4-203ENST00000427779 HOXC9P31274 260 aa23.87■■□□□ 1.41
PSMD4-203ENST00000427779 AMPHP49418 695 aa23.87■■□□□ 1.41
PSMD4-203ENST00000427779 KLHL34Q8N239 644 aa23.87■■□□□ 1.41
PSMD4-203ENST00000427779 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
PSMD4-203ENST00000427779 ZCRB1Q8TBF4 217 aaKnown RBP23.85■■□□□ 1.41
PSMD4-203ENST00000427779 RTL1A6NKG5 1358 aa23.84■■□□□ 1.41
PSMD4-203ENST00000427779 NSD2O96028 1365 aa23.82■■□□□ 1.4
PSMD4-203ENST00000427779 TESK2Q96S53 571 aa23.82■■□□□ 1.4
PSMD4-203ENST00000427779 MEGF6O75095 1541 aa23.82■■□□□ 1.4
PSMD4-203ENST00000427779 ST20-MTHFSA0A0A6YYL1 179 aa23.81■■□□□ 1.4
PSMD4-203ENST00000427779 C1QTNF8P60827 252 aa23.81■■□□□ 1.4
PSMD4-203ENST00000427779 CCNL1Q9UK58 526 aaPredicted RBP23.81■■□□□ 1.4
PSMD4-203ENST00000427779 SMG6Q86US8 1419 aaKnown RBP23.81■■□□□ 1.4
PSMD4-203ENST00000427779 CGNL1Q0VF96 1302 aa23.81■■□□□ 1.4
PSMD4-203ENST00000427779 KCNQ4P56696 695 aa23.8■■□□□ 1.4
PSMD4-203ENST00000427779 USP47Q96K76 1375 aa23.79■■□□□ 1.4
PSMD4-203ENST00000427779 SENP3-EIF4A1A0A087X0R7 540 aa23.79■■□□□ 1.4
PSMD4-203ENST00000427779 PELP1Q8IZL8 1130 aaKnown RBP23.79■■□□□ 1.4
PSMD4-203ENST00000427779 FBLN1P23142 703 aa23.77■■□□□ 1.4
PSMD4-203ENST00000427779 HMGB2P26583 209 aaKnown RBP23.77■■□□□ 1.4
PSMD4-203ENST00000427779 RAPGEF4Q8WZA2 1011 aa23.76■■□□□ 1.39
PSMD4-203ENST00000427779 C5P01031 1676 aa23.76■■□□□ 1.39
PSMD4-203ENST00000427779 MSH5O43196 834 aa23.75■■□□□ 1.39
PSMD4-203ENST00000427779 RRS1Q15050 365 aaKnown RBP23.75■■□□□ 1.39
PSMD4-203ENST00000427779 NBPF6Q5VWK0 638 aa23.75■■□□□ 1.39
PSMD4-203ENST00000427779 NBPF4Q96M43 638 aa23.75■■□□□ 1.39
PSMD4-203ENST00000427779 GOLGB1Q14789 3259 aaKnown RBP23.75■■□□□ 1.39
PSMD4-203ENST00000427779 NLGN2Q8NFZ4 835 aa23.74■■□□□ 1.39
PSMD4-203ENST00000427779 KIF20BQ96Q89 1820 aa23.74■■□□□ 1.39
PSMD4-203ENST00000427779 GIGYF1O75420 1035 aaPredicted RBP23.73■■□□□ 1.39
PSMD4-203ENST00000427779 TATP17735 454 aaPredicted RBP23.73■■□□□ 1.39
PSMD4-203ENST00000427779 FYB1O15117 783 aa23.72■■□□□ 1.39
PSMD4-203ENST00000427779 GRIN3BO60391 1043 aa23.72■■□□□ 1.39
PSMD4-203ENST00000427779 USHBP1Q8N6Y0 703 aa23.72■■□□□ 1.39
PSMD4-203ENST00000427779 GGNBP2Q9H3C7 697 aa23.72■■□□□ 1.39
PSMD4-203ENST00000427779 PCDH11XQ9BZA7 1347 aa23.72■■□□□ 1.39
PSMD4-203ENST00000427779 PCDH11YQ9BZA8 1340 aa23.72■■□□□ 1.39
PSMD4-203ENST00000427779 TMF1P82094 1093 aa23.71■■□□□ 1.39
PSMD4-203ENST00000427779 COL23A1Q86Y22 540 aaPredicted RBP23.71■■□□□ 1.39
PSMD4-203ENST00000427779 TAF1LQ8IZX4 1826 aa23.7■■□□□ 1.39
PSMD4-203ENST00000427779 INSRP06213 1382 aa23.7■■□□□ 1.38
PSMD4-203ENST00000427779 KIF24Q5T7B8 1368 aa23.7■■□□□ 1.38
PSMD4-203ENST00000427779 FLT4P35916 1363 aa23.69■■□□□ 1.38
PSMD4-203ENST00000427779 FLAD1Q8NFF5 587 aa23.69■■□□□ 1.38
PSMD4-203ENST00000427779 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
PSMD4-203ENST00000427779 ITGB4P16144 1822 aa23.66■■□□□ 1.38
PSMD4-203ENST00000427779 YBX3P16989 372 aaKnown RBP eCLIP23.65■■□□□ 1.38
PSMD4-203ENST00000427779 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
PSMD4-203ENST00000427779 HSP90AB2PQ58FF8 381 aa23.65■■□□□ 1.38
PSMD4-203ENST00000427779 MSL1Q68DK7 614 aa23.65■■□□□ 1.38
PSMD4-203ENST00000427779 CD2APQ9Y5K6 639 aa23.64■■□□□ 1.37
PSMD4-203ENST00000427779 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.37
PSMD4-203ENST00000427779 C4BP0C0L5 1744 aa23.63■■□□□ 1.37
PSMD4-203ENST00000427779 MPRIPQ6WCQ1 1025 aa23.63■■□□□ 1.37
PSMD4-203ENST00000427779 SMARCC1Q92922 1105 aaPredicted RBP23.63■■□□□ 1.37
PSMD4-203ENST00000427779 TOGARAM1Q9Y4F4 1720 aa23.63■■□□□ 1.37
PSMD4-203ENST00000427779 NSD3Q9BZ95 1437 aa23.61■■□□□ 1.37
PSMD4-203ENST00000427779 CYP27B1O15528 508 aa23.6■■□□□ 1.37
PSMD4-203ENST00000427779 AK7Q96M32 723 aa23.6■■□□□ 1.37
PSMD4-203ENST00000427779 UBR3Q6ZT12 1888 aa23.6■■□□□ 1.37
PSMD4-203ENST00000427779 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
PSMD4-203ENST00000427779 ATP10DQ9P241 1426 aa23.57■■□□□ 1.36
PSMD4-203ENST00000427779 NCAPD2Q15021 1401 aa23.56■■□□□ 1.36
PSMD4-203ENST00000427779 SPG7Q9UQ90 795 aa23.55■■□□□ 1.36
PSMD4-203ENST00000427779 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
PSMD4-203ENST00000427779 MAP2P11137 1827 aaKnown RBP23.54■■□□□ 1.36
PSMD4-203ENST00000427779 NKX1-1Q15270 411 aaPredicted RBP23.53■■□□□ 1.36
PSMD4-203ENST00000427779 PIGBQ92521 554 aa23.53■■□□□ 1.36
PSMD4-203ENST00000427779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.52■■□□□ 1.36
PSMD4-203ENST00000427779 PPM1GO15355 546 aaPredicted RBP23.52■■□□□ 1.36
PSMD4-203ENST00000427779 PHF14O94880 888 aa23.52■■□□□ 1.36
PSMD4-203ENST00000427779 GPBP1L1Q9HC44 474 aaPredicted RBP23.52■■□□□ 1.36
PSMD4-203ENST00000427779 SSFA2P28290 1259 aa23.51■■□□□ 1.35
PSMD4-203ENST00000427779 CARD14Q9BXL6 1004 aa23.51■■□□□ 1.35
PSMD4-203ENST00000427779 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
PSMD4-203ENST00000427779 SIK1P57059 783 aa23.5■■□□□ 1.35
PSMD4-203ENST00000427779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.5■■□□□ 1.35
PSMD4-203ENST00000427779 TMOD3Q9NYL9 352 aa23.5■■□□□ 1.35
PSMD4-203ENST00000427779 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
PSMD4-203ENST00000427779 IGSF1Q8N6C5 1336 aa23.49■■□□□ 1.35
PSMD4-203ENST00000427779 ADCY9O60503 1353 aa23.49■■□□□ 1.35
PSMD4-203ENST00000427779 AMIGO3Q86WK7 504 aa23.48■■□□□ 1.35
PSMD4-203ENST00000427779 CEP350Q5VT06 3117 aa23.46■■□□□ 1.35
PSMD4-203ENST00000427779 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
PSMD4-203ENST00000427779 LINC00116Q8NCU8 138 aa23.46■■□□□ 1.35
PSMD4-203ENST00000427779 EYA1Q99502 592 aa23.46■■□□□ 1.35
PSMD4-203ENST00000427779 PLEKHG2Q9H7P9 1386 aa23.44■■□□□ 1.34
PSMD4-203ENST00000427779 GNPATO15228 680 aa23.44■■□□□ 1.34
PSMD4-203ENST00000427779 ATP6V1AP38606 617 aa23.44■■□□□ 1.34
PSMD4-203ENST00000427779 PHKG2P15735 406 aa23.43■■□□□ 1.34
PSMD4-203ENST00000427779 SMIM5Q71RC9 77 aa23.42■■□□□ 1.34
PSMD4-203ENST00000427779 ZNF526Q8TF50 670 aaPredicted RBP23.42■■□□□ 1.34
PSMD4-203ENST00000427779 ASAP1Q9ULH1 1129 aa23.42■■□□□ 1.34
PSMD4-203ENST00000427779 ITPK1Q13572 414 aa23.41■■□□□ 1.34
PSMD4-203ENST00000427779 POLKQ9UBT6 870 aa23.41■■□□□ 1.34
PSMD4-203ENST00000427779 KIF13BQ9NQT8 1826 aa23.4■■□□□ 1.34
PSMD4-203ENST00000427779 WWC3Q9ULE0 1092 aa23.4■■□□□ 1.34
PSMD4-203ENST00000427779 CICQ96RK0 1608 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms