RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.65
SMARCAL1-206ENST00000427645 BCL11BQ9C0K0 894 aaPredicted RBP11.02□□□□□ -0.65
SMARCAL1-206ENST00000427645 WDR17Q8IZU2 1322 aa11.02□□□□□ -0.65
SMARCAL1-206ENST00000427645 SLIT3O75094 1523 aa11.01□□□□□ -0.65
SMARCAL1-206ENST00000427645 MAP2P11137 1827 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-206ENST00000427645 PLSCR1O15162 318 aa11.01□□□□□ -0.65
SMARCAL1-206ENST00000427645 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
SMARCAL1-206ENST00000427645 WDR43Q15061 677 aaKnown RBP eCLIP11□□□□□ -0.65
SMARCAL1-206ENST00000427645 POLKQ9UBT6 870 aa11□□□□□ -0.65
SMARCAL1-206ENST00000427645 NUDCQ9Y266 331 aa11□□□□□ -0.65
SMARCAL1-206ENST00000427645 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-206ENST00000427645 PIK3C2AO00443 1686 aa11□□□□□ -0.65
SMARCAL1-206ENST00000427645 INSRP06213 1382 aa11□□□□□ -0.65
SMARCAL1-206ENST00000427645 LRRC37A3O60309 1634 aa10.99□□□□□ -0.65
SMARCAL1-206ENST00000427645 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
SMARCAL1-206ENST00000427645 PEAK1Q9H792 1746 aa10.99□□□□□ -0.65
SMARCAL1-206ENST00000427645 PARP4Q9UKK3 1724 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-206ENST00000427645 ACSBG1Q96GR2 724 aa10.99□□□□□ -0.65
SMARCAL1-206ENST00000427645 KIF24Q5T7B8 1368 aa10.99□□□□□ -0.65
SMARCAL1-206ENST00000427645 EXOC5O00471 708 aa10.98□□□□□ -0.65
SMARCAL1-206ENST00000427645 TXNRD1Q16881 649 aa10.98□□□□□ -0.65
SMARCAL1-206ENST00000427645 CARD10Q9BWT7 1032 aa10.98□□□□□ -0.65
SMARCAL1-206ENST00000427645 PNNQ9H307 717 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-206ENST00000427645 COL18A1P39060 1754 aa10.98□□□□□ -0.65
SMARCAL1-206ENST00000427645 UTRNP46939 3433 aa10.97□□□□□ -0.65
SMARCAL1-206ENST00000427645 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-206ENST00000427645 DIAPH1O60610 1272 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-206ENST00000427645 PTGER2P43116 358 aa10.96□□□□□ -0.65
SMARCAL1-206ENST00000427645 YTHDC1Q96MU7 727 aaKnown RBP10.96□□□□□ -0.65
SMARCAL1-206ENST00000427645 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.65
SMARCAL1-206ENST00000427645 ADAMTS8Q9UP79 889 aa10.96□□□□□ -0.65
SMARCAL1-206ENST00000427645 SMG6Q86US8 1419 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 AMPHP49418 695 aa10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 RRS1Q15050 365 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 SLC15A2Q16348 729 aa10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 CDCA7Q9BWT1 371 aaPredicted RBP10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 RNF39Q9H2S5 420 aa10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 STK32BQ9NY57 414 aa10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
SMARCAL1-206ENST00000427645 FBLN1P23142 703 aa10.94□□□□□ -0.66
SMARCAL1-206ENST00000427645 NGEFQ8N5V2 710 aa10.94□□□□□ -0.66
SMARCAL1-206ENST00000427645 SBF2Q86WG5 1849 aa10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 FLT4P35916 1363 aa10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 MAP3K19Q56UN5 1328 aa10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 CENPBP07199 599 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 HNRNPUQ00839 825 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 IP6K1Q92551 441 aa10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 NFAT5O94916 1531 aa10.93□□□□□ -0.66
SMARCAL1-206ENST00000427645 RTL1A6NKG5 1358 aa10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 ERBB3P21860 1342 aa10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 FCHSD2O94868 740 aa10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 NEFMP07197 916 aa10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 U2AF1L5P0DN76 240 aaPredicted RBP10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 IL13P35225 146 aa10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 U2AF1Q01081 240 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 LTV1Q96GA3 475 aaPredicted RBP10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 BCL9O00512 1426 aa10.92□□□□□ -0.66
SMARCAL1-206ENST00000427645 CASZ1Q86V15 1759 aa10.91□□□□□ -0.66
SMARCAL1-206ENST00000427645 U2SURPO15042 1029 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-206ENST00000427645 IL2RBP14784 551 aa10.91□□□□□ -0.66
SMARCAL1-206ENST00000427645 HOXC9P31274 260 aa10.91□□□□□ -0.66
SMARCAL1-206ENST00000427645 KCNQ4P56696 695 aa10.91□□□□□ -0.66
SMARCAL1-206ENST00000427645 SYT17Q9BSW7 474 aa10.91□□□□□ -0.66
SMARCAL1-206ENST00000427645 TNS2Q63HR2 1409 aa10.91□□□□□ -0.66
SMARCAL1-206ENST00000427645 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-206ENST00000427645 ZNF827Q17R98 1081 aa10.9□□□□□ -0.66
SMARCAL1-206ENST00000427645 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
SMARCAL1-206ENST00000427645 DDX54Q8TDD1 881 aaKnown RBP10.9□□□□□ -0.66
SMARCAL1-206ENST00000427645 RUNDC1Q96C34 613 aa10.9□□□□□ -0.66
SMARCAL1-206ENST00000427645 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
SMARCAL1-206ENST00000427645 WNK3Q9BYP7 1800 aa10.9□□□□□ -0.66
SMARCAL1-206ENST00000427645 EIF4A2Q14240 407 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-206ENST00000427645 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
SMARCAL1-206ENST00000427645 MTFR1LQ9H019 292 aa10.89□□□□□ -0.67
SMARCAL1-206ENST00000427645 LTN1O94822 1766 aa10.89□□□□□ -0.67
SMARCAL1-206ENST00000427645 ZBED9Q6R2W3 1325 aa10.88□□□□□ -0.67
SMARCAL1-206ENST00000427645 RGPD3A6NKT7 1758 aaPredicted RBP10.88□□□□□ -0.67
SMARCAL1-206ENST00000427645 RGPD4Q7Z3J3 1758 aa10.88□□□□□ -0.67
SMARCAL1-206ENST00000427645 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
SMARCAL1-206ENST00000427645 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
SMARCAL1-206ENST00000427645 ZNF784Q8NCA9 323 aaPredicted RBP10.87□□□□□ -0.67
SMARCAL1-206ENST00000427645 SYTL4Q96C24 671 aaPredicted RBP10.87□□□□□ -0.67
SMARCAL1-206ENST00000427645 ARXQ96QS3 562 aa10.87□□□□□ -0.67
SMARCAL1-206ENST00000427645 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
SMARCAL1-206ENST00000427645 ABCC6O95255 1503 aa10.86□□□□□ -0.67
SMARCAL1-206ENST00000427645 GOLGB1Q14789 3259 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-206ENST00000427645 APAF1O14727 1248 aa10.85□□□□□ -0.67
SMARCAL1-206ENST00000427645 PRIM1P49642 420 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-206ENST00000427645 CCDC146Q8IYE0 955 aa10.85□□□□□ -0.67
SMARCAL1-206ENST00000427645 PLEKHF1Q96S99 279 aa10.85□□□□□ -0.67
SMARCAL1-206ENST00000427645 RSPH6AQ9H0K4 717 aa10.85□□□□□ -0.67
SMARCAL1-206ENST00000427645 NHSQ6T4R5 1651 aa10.85□□□□□ -0.67
SMARCAL1-206ENST00000427645 HMOX1P09601 288 aa10.84□□□□□ -0.67
SMARCAL1-206ENST00000427645 SULT6B1Q6IMI4 303 aa10.84□□□□□ -0.67
SMARCAL1-206ENST00000427645 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-206ENST00000427645 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
SMARCAL1-206ENST00000427645 EYA1Q99502 592 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms