RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-205ENST00000427561 SLC16A10Q8TF71 515 aa19.16■□□□□ 0.66
UBA1-205ENST00000427561 AKT1S1Q96B36 256 aa19.16■□□□□ 0.66
UBA1-205ENST00000427561 RTL1A6NKG5 1358 aa19.16■□□□□ 0.66
UBA1-205ENST00000427561 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.65
UBA1-205ENST00000427561 GGNBP2Q9H3C7 697 aa19.14■□□□□ 0.65
UBA1-205ENST00000427561 KIF20BQ96Q89 1820 aa19.14■□□□□ 0.65
UBA1-205ENST00000427561 TUBGCP6Q96RT7 1819 aa19.14■□□□□ 0.65
UBA1-205ENST00000427561 NBPF6Q5VWK0 638 aa19.13■□□□□ 0.65
UBA1-205ENST00000427561 NBPF4Q96M43 638 aa19.13■□□□□ 0.65
UBA1-205ENST00000427561 CGNL1Q0VF96 1302 aa19.13■□□□□ 0.65
UBA1-205ENST00000427561 USP47Q96K76 1375 aa19.13■□□□□ 0.65
UBA1-205ENST00000427561 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
UBA1-205ENST00000427561 MEGF6O75095 1541 aa19.13■□□□□ 0.65
UBA1-205ENST00000427561 COL24A1Q17RW2 1714 aa19.13■□□□□ 0.65
UBA1-205ENST00000427561 SMG6Q86US8 1419 aaKnown RBP19.12■□□□□ 0.65
UBA1-205ENST00000427561 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
UBA1-205ENST00000427561 TFCP2L1Q9NZI6 479 aa19.12■□□□□ 0.65
UBA1-205ENST00000427561 PNPLA7Q6ZV29 1317 aa19.11■□□□□ 0.65
UBA1-205ENST00000427561 POLD1P28340 1107 aa19.11■□□□□ 0.65
UBA1-205ENST00000427561 KCNQ4P56696 695 aa19.11■□□□□ 0.65
UBA1-205ENST00000427561 RAPGEF4Q8WZA2 1011 aa19.11■□□□□ 0.65
UBA1-205ENST00000427561 NSD2O96028 1365 aa19.1■□□□□ 0.65
UBA1-205ENST00000427561 TATP17735 454 aaPredicted RBP19.09■□□□□ 0.65
UBA1-205ENST00000427561 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
UBA1-205ENST00000427561 USHBP1Q8N6Y0 703 aa19.09■□□□□ 0.65
UBA1-205ENST00000427561 CCNL1Q9UK58 526 aaPredicted RBP19.09■□□□□ 0.65
UBA1-205ENST00000427561 INSRP06213 1382 aa19.08■□□□□ 0.65
UBA1-205ENST00000427561 ZNF784Q8NCA9 323 aaPredicted RBP19.08■□□□□ 0.64
UBA1-205ENST00000427561 KIF24Q5T7B8 1368 aa19.07■□□□□ 0.64
UBA1-205ENST00000427561 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
UBA1-205ENST00000427561 KLHL34Q8N239 644 aa19.07■□□□□ 0.64
UBA1-205ENST00000427561 FLT4P35916 1363 aa19.06■□□□□ 0.64
UBA1-205ENST00000427561 GPR162Q16538 588 aa19.06■□□□□ 0.64
UBA1-205ENST00000427561 HMGB2P26583 209 aaKnown RBP19.05■□□□□ 0.64
UBA1-205ENST00000427561 PCDH11XQ9BZA7 1347 aa19.04■□□□□ 0.64
UBA1-205ENST00000427561 PCDH11YQ9BZA8 1340 aa19.04■□□□□ 0.64
UBA1-205ENST00000427561 ITGB4P16144 1822 aa19.04■□□□□ 0.64
UBA1-205ENST00000427561 TAF1LQ8IZX4 1826 aa19.03■□□□□ 0.64
UBA1-205ENST00000427561 MSH5O43196 834 aa19.03■□□□□ 0.64
UBA1-205ENST00000427561 C5P01031 1676 aa19.03■□□□□ 0.64
UBA1-205ENST00000427561 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
UBA1-205ENST00000427561 CARD14Q9BXL6 1004 aa19.02■□□□□ 0.64
UBA1-205ENST00000427561 COL23A1Q86Y22 540 aaPredicted RBP19.01■□□□□ 0.63
UBA1-205ENST00000427561 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
UBA1-205ENST00000427561 PELP1Q8IZL8 1130 aaKnown RBP19■□□□□ 0.63
UBA1-205ENST00000427561 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
UBA1-205ENST00000427561 PKD1L3Q7Z443 1732 aa19■□□□□ 0.63
UBA1-205ENST00000427561 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
UBA1-205ENST00000427561 CYP27B1O15528 508 aa18.99■□□□□ 0.63
UBA1-205ENST00000427561 TIMELESSQ9UNS1 1208 aa18.99■□□□□ 0.63
UBA1-205ENST00000427561 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
UBA1-205ENST00000427561 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
UBA1-205ENST00000427561 FLAD1Q8NFF5 587 aa18.98■□□□□ 0.63
UBA1-205ENST00000427561 ANKRD26Q9UPS8 1709 aa18.97■□□□□ 0.63
UBA1-205ENST00000427561 TOGARAM1Q9Y4F4 1720 aa18.97■□□□□ 0.63
UBA1-205ENST00000427561 NLGN2Q8NFZ4 835 aa18.97■□□□□ 0.63
UBA1-205ENST00000427561 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
UBA1-205ENST00000427561 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
UBA1-205ENST00000427561 WASHC2AQ641Q2 1341 aa18.95■□□□□ 0.62
UBA1-205ENST00000427561 NCAPD2Q15021 1401 aa18.94■□□□□ 0.62
UBA1-205ENST00000427561 NKX1-1Q15270 411 aaPredicted RBP18.94■□□□□ 0.62
UBA1-205ENST00000427561 MSL1Q68DK7 614 aa18.94■□□□□ 0.62
UBA1-205ENST00000427561 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
UBA1-205ENST00000427561 GRIN3BO60391 1043 aa18.93■□□□□ 0.62
UBA1-205ENST00000427561 UBR3Q6ZT12 1888 aa18.92■□□□□ 0.62
UBA1-205ENST00000427561 C1QTNF8P60827 252 aa18.92■□□□□ 0.62
UBA1-205ENST00000427561 PIGBQ92521 554 aa18.92■□□□□ 0.62
UBA1-205ENST00000427561 AK7Q96M32 723 aa18.92■□□□□ 0.62
UBA1-205ENST00000427561 EYA1Q99502 592 aa18.92■□□□□ 0.62
UBA1-205ENST00000427561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.92■□□□□ 0.621e-8■□□□□ 8.1
UBA1-205ENST00000427561 CD2APQ9Y5K6 639 aa18.91■□□□□ 0.62
UBA1-205ENST00000427561 YBX3P16989 372 aaKnown RBP eCLIP18.9■□□□□ 0.622e-10■□□□□ 9.4
UBA1-205ENST00000427561 POLR3GLQ9BT43 218 aa18.9■□□□□ 0.62
UBA1-205ENST00000427561 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
UBA1-205ENST00000427561 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
UBA1-205ENST00000427561 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
UBA1-205ENST00000427561 TMOD3Q9NYL9 352 aa18.88■□□□□ 0.61
UBA1-205ENST00000427561 SENP3-EIF4A1A0A087X0R7 540 aa18.87■□□□□ 0.61
UBA1-205ENST00000427561 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
UBA1-205ENST00000427561 SIK1P57059 783 aa18.87■□□□□ 0.61
UBA1-205ENST00000427561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.86■□□□□ 0.61
UBA1-205ENST00000427561 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
UBA1-205ENST00000427561 PHF14O94880 888 aa18.86■□□□□ 0.61
UBA1-205ENST00000427561 PHKG2P15735 406 aa18.86■□□□□ 0.61
UBA1-205ENST00000427561 UTRNP46939 3433 aa18.86■□□□□ 0.61
UBA1-205ENST00000427561 SSFA2P28290 1259 aa18.85■□□□□ 0.61
UBA1-205ENST00000427561 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
UBA1-205ENST00000427561 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
UBA1-205ENST00000427561 TNNT2P45379 298 aaPredicted RBP18.84■□□□□ 0.61
UBA1-205ENST00000427561 AMIGO3Q86WK7 504 aa18.84■□□□□ 0.61
UBA1-205ENST00000427561 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
UBA1-205ENST00000427561 ASAP1Q9ULH1 1129 aa18.84■□□□□ 0.61
UBA1-205ENST00000427561 ATP6V1AP38606 617 aa18.83■□□□□ 0.6
UBA1-205ENST00000427561 PLEKHG2Q9H7P9 1386 aa18.82■□□□□ 0.6
UBA1-205ENST00000427561 EIF4G2P78344 907 aaKnown RBP eCLIP18.82■□□□□ 0.6
UBA1-205ENST00000427561 SMIM5Q71RC9 77 aa18.82■□□□□ 0.6
UBA1-205ENST00000427561 GNPATO15228 680 aa18.81■□□□□ 0.6
UBA1-205ENST00000427561 ITPK1Q13572 414 aa18.81■□□□□ 0.6
UBA1-205ENST00000427561 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
UBA1-205ENST00000427561 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms