RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 HSPA1BP0DMV9 641 aaKnown RBP13.52□□□□□ -0.25
LSG1-202ENST00000427461 PRIM1P49642 420 aaKnown RBP13.52□□□□□ -0.25
LSG1-202ENST00000427461 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.25
LSG1-202ENST00000427461 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
LSG1-202ENST00000427461 NFAT5O94916 1531 aa13.51□□□□□ -0.25
LSG1-202ENST00000427461 NSD2O96028 1365 aa13.51□□□□□ -0.25
LSG1-202ENST00000427461 RBM46Q8TBY0 533 aaKnown RBP13.51□□□□□ -0.25
LSG1-202ENST00000427461 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
LSG1-202ENST00000427461 CICQ96RK0 1608 aaPredicted RBP13.5□□□□□ -0.25
LSG1-202ENST00000427461 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
LSG1-202ENST00000427461 ERBB3P21860 1342 aa13.49□□□□□ -0.25
LSG1-202ENST00000427461 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
LSG1-202ENST00000427461 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
LSG1-202ENST00000427461 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
LSG1-202ENST00000427461 C16orf71Q8IYS4 520 aaPredicted RBP13.47□□□□□ -0.25
LSG1-202ENST00000427461 C5P01031 1676 aa13.47□□□□□ -0.25
LSG1-202ENST00000427461 FSTL1Q12841 308 aa13.46□□□□□ -0.25
LSG1-202ENST00000427461 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
LSG1-202ENST00000427461 USP54Q70EL1 1684 aa13.46□□□□□ -0.26
LSG1-202ENST00000427461 ANKRD24Q8TF21 1146 aa13.45□□□□□ -0.26
LSG1-202ENST00000427461 PCDH10Q9P2E7 1040 aa13.45□□□□□ -0.26
LSG1-202ENST00000427461 LTN1O94822 1766 aa13.44□□□□□ -0.26
LSG1-202ENST00000427461 TAF1LQ8IZX4 1826 aa13.43□□□□□ -0.26
LSG1-202ENST00000427461 N4BP2Q86UW6 1770 aaPredicted RBP13.43□□□□□ -0.26
LSG1-202ENST00000427461 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
LSG1-202ENST00000427461 ARHGAP27Q6ZUM4 889 aa13.43□□□□□ -0.26
LSG1-202ENST00000427461 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
LSG1-202ENST00000427461 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
LSG1-202ENST00000427461 USP47Q96K76 1375 aa13.43□□□□□ -0.26
LSG1-202ENST00000427461 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
LSG1-202ENST00000427461 KCPQ6ZWJ8 1503 aa13.42□□□□□ -0.26
LSG1-202ENST00000427461 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
LSG1-202ENST00000427461 PHF14O94880 888 aa13.41□□□□□ -0.26
LSG1-202ENST00000427461 FLAD1Q8NFF5 587 aa13.41□□□□□ -0.26
LSG1-202ENST00000427461 RRAGCQ9HB90 399 aa13.41□□□□□ -0.26
LSG1-202ENST00000427461 PXDNLA1KZ92 1463 aa13.41□□□□□ -0.26
LSG1-202ENST00000427461 C9orf131Q5VYM1 1079 aa13.4□□□□□ -0.26
LSG1-202ENST00000427461 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
LSG1-202ENST00000427461 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
LSG1-202ENST00000427461 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
LSG1-202ENST00000427461 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
LSG1-202ENST00000427461 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
LSG1-202ENST00000427461 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
LSG1-202ENST00000427461 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
LSG1-202ENST00000427461 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
LSG1-202ENST00000427461 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
LSG1-202ENST00000427461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
LSG1-202ENST00000427461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.37□□□□□ -0.27
LSG1-202ENST00000427461 SMC1BQ8NDV3 1235 aa13.37□□□□□ -0.27
LSG1-202ENST00000427461 AK7Q96M32 723 aa13.37□□□□□ -0.27
LSG1-202ENST00000427461 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
LSG1-202ENST00000427461 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
LSG1-202ENST00000427461 ZCRB1Q8TBF4 217 aaKnown RBP13.36□□□□□ -0.27
LSG1-202ENST00000427461 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
LSG1-202ENST00000427461 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
LSG1-202ENST00000427461 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
LSG1-202ENST00000427461 FCHSD2O94868 740 aa13.35□□□□□ -0.27
LSG1-202ENST00000427461 NME9Q86XW9 330 aa13.35□□□□□ -0.27
LSG1-202ENST00000427461 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
LSG1-202ENST00000427461 PALLDQ8WX93 1383 aa13.34□□□□□ -0.27
LSG1-202ENST00000427461 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
LSG1-202ENST00000427461 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
LSG1-202ENST00000427461 DPEP1P16444 411 aa13.34□□□□□ -0.27
LSG1-202ENST00000427461 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
LSG1-202ENST00000427461 MEGF6O75095 1541 aa13.34□□□□□ -0.27
LSG1-202ENST00000427461 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.27
LSG1-202ENST00000427461 USP31Q70CQ4 1352 aa13.33□□□□□ -0.27
LSG1-202ENST00000427461 FOXN1O15353 648 aa13.33□□□□□ -0.28
LSG1-202ENST00000427461 MMP10P09238 476 aa13.33□□□□□ -0.28
LSG1-202ENST00000427461 TGFB2P61812 414 aa13.33□□□□□ -0.28
LSG1-202ENST00000427461 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
LSG1-202ENST00000427461 MON2Q7Z3U7 1717 aa13.33□□□□□ -0.28
LSG1-202ENST00000427461 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
LSG1-202ENST00000427461 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
LSG1-202ENST00000427461 ARFGEF1Q9Y6D6 1849 aa13.3□□□□□ -0.28
LSG1-202ENST00000427461 SBF1O95248 1867 aa13.3□□□□□ -0.28
LSG1-202ENST00000427461 SSFA2P28290 1259 aa13.3□□□□□ -0.28
LSG1-202ENST00000427461 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
LSG1-202ENST00000427461 IP6K1Q92551 441 aa13.3□□□□□ -0.28
LSG1-202ENST00000427461 KCNA3P22001 575 aa13.29□□□□□ -0.28
LSG1-202ENST00000427461 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
LSG1-202ENST00000427461 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
LSG1-202ENST00000427461 PRDM10Q9NQV6 1147 aa13.28□□□□□ -0.28
LSG1-202ENST00000427461 ITGB4P16144 1822 aa13.27□□□□□ -0.28
LSG1-202ENST00000427461 GNPATO15228 680 aa13.27□□□□□ -0.29
LSG1-202ENST00000427461 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.29
LSG1-202ENST00000427461 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
LSG1-202ENST00000427461 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.29
LSG1-202ENST00000427461 MAP2P11137 1827 aaKnown RBP13.26□□□□□ -0.29
LSG1-202ENST00000427461 FBLN1P23142 703 aa13.26□□□□□ -0.29
LSG1-202ENST00000427461 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
LSG1-202ENST00000427461 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
LSG1-202ENST00000427461 DCAF5Q96JK2 942 aa13.26□□□□□ -0.29
LSG1-202ENST00000427461 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
LSG1-202ENST00000427461 VEGFAP15692 232 aaPredicted RBP13.25□□□□□ -0.29
LSG1-202ENST00000427461 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
LSG1-202ENST00000427461 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
LSG1-202ENST00000427461 HOXC9P31274 260 aa13.24□□□□□ -0.29
LSG1-202ENST00000427461 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
LSG1-202ENST00000427461 ITPK1Q13572 414 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms