RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
HFM1-202ENST00000427444 PRICKLE2Q7Z3G6 844 aa12.4□□□□□ -0.42
HFM1-202ENST00000427444 NANOS1Q8WY41 292 aaKnown RBP12.4□□□□□ -0.42
HFM1-202ENST00000427444 COL25A1Q9BXS0 654 aaPredicted RBP12.4□□□□□ -0.42
HFM1-202ENST00000427444 PCDHB11Q9Y5F2 797 aa12.4□□□□□ -0.42
HFM1-202ENST00000427444 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
HFM1-202ENST00000427444 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
HFM1-202ENST00000427444 RHOQP17081 205 aa12.38□□□□□ -0.43
HFM1-202ENST00000427444 SCTRP47872 440 aa12.38□□□□□ -0.43
HFM1-202ENST00000427444 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
HFM1-202ENST00000427444 A0A1W2PRU2 124 aa12.37□□□□□ -0.43
HFM1-202ENST00000427444 RNF144AP50876 292 aaPredicted RBP12.37□□□□□ -0.43
HFM1-202ENST00000427444 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
HFM1-202ENST00000427444 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
HFM1-202ENST00000427444 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
HFM1-202ENST00000427444 RNFT1Q5M7Z0 435 aa12.36□□□□□ -0.43
HFM1-202ENST00000427444 CYP2U1Q7Z449 544 aa12.34□□□□□ -0.43
HFM1-202ENST00000427444 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
HFM1-202ENST00000427444 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
HFM1-202ENST00000427444 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
HFM1-202ENST00000427444 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
HFM1-202ENST00000427444 CUEDC1Q9NWM3 386 aaPredicted RBP12.32□□□□□ -0.44
HFM1-202ENST00000427444 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
HFM1-202ENST00000427444 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
HFM1-202ENST00000427444 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
HFM1-202ENST00000427444 GPC1P35052 558 aa12.3□□□□□ -0.44
HFM1-202ENST00000427444 POU4F2Q12837 409 aa12.29□□□□□ -0.44
HFM1-202ENST00000427444 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
HFM1-202ENST00000427444 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
HFM1-202ENST00000427444 RAB6BQ9NRW1 208 aa12.29□□□□□ -0.44
HFM1-202ENST00000427444 TRAK2O60296 914 aa12.28□□□□□ -0.44
HFM1-202ENST00000427444 CLN3Q13286 438 aa12.28□□□□□ -0.44
HFM1-202ENST00000427444 RIPOR1Q6ZS17 1223 aa12.28□□□□□ -0.44
HFM1-202ENST00000427444 IRF5Q13568 498 aa12.27□□□□□ -0.45
HFM1-202ENST00000427444 MYCP01106 439 aaPredicted RBP12.26□□□□□ -0.45
HFM1-202ENST00000427444 EIF4G2P78344 907 aaKnown RBP eCLIP12.26□□□□□ -0.45
HFM1-202ENST00000427444 SVOPQ8N4V2 548 aa12.25□□□□□ -0.45
HFM1-202ENST00000427444 GAS2L1Q99501 681 aaPredicted RBP12.25□□□□□ -0.45
HFM1-202ENST00000427444 GRIP2Q9C0E4 1043 aa12.25□□□□□ -0.45
HFM1-202ENST00000427444 GDPD2Q9HCC8 539 aa12.25□□□□□ -0.45
HFM1-202ENST00000427444 ABL2P42684 1182 aa12.24□□□□□ -0.45
HFM1-202ENST00000427444 VAC14Q08AM6 782 aa12.24□□□□□ -0.45
HFM1-202ENST00000427444 TSGA10IPQ3SY00 556 aa12.24□□□□□ -0.45
HFM1-202ENST00000427444 ZNF385CQ66K41 422 aaPredicted RBP12.24□□□□□ -0.45
HFM1-202ENST00000427444 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
HFM1-202ENST00000427444 GNRH1P01148 92 aa12.23□□□□□ -0.45
HFM1-202ENST00000427444 NBPF10Q6P3W6 841 aaKnown RBP12.23□□□□□ -0.45
HFM1-202ENST00000427444 NBPF15Q8N660 670 aa12.23□□□□□ -0.45
HFM1-202ENST00000427444 ZNF837Q96EG3 531 aaPredicted RBP12.23□□□□□ -0.45
HFM1-202ENST00000427444 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
HFM1-202ENST00000427444 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
HFM1-202ENST00000427444 TRIM22Q8IYM9 498 aa12.22□□□□□ -0.45
HFM1-202ENST00000427444 CNKSR1Q969H4 720 aa12.22□□□□□ -0.45
HFM1-202ENST00000427444 DYRK1BQ9Y463 629 aa12.22□□□□□ -0.45
HFM1-202ENST00000427444 GPR25O00155 361 aa12.21□□□□□ -0.45
HFM1-202ENST00000427444 IL2RAP01589 272 aa12.21□□□□□ -0.45
HFM1-202ENST00000427444 DBN1Q16643 649 aa12.21□□□□□ -0.45
HFM1-202ENST00000427444 ADAMTS8Q9UP79 889 aa12.21□□□□□ -0.45
HFM1-202ENST00000427444 DOLKQ9UPQ8 538 aa12.21□□□□□ -0.45
HFM1-202ENST00000427444 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
HFM1-202ENST00000427444 GAS6Q14393 721 aa12.2□□□□□ -0.46
HFM1-202ENST00000427444 RNF135Q8IUD6 432 aa12.2□□□□□ -0.46
HFM1-202ENST00000427444 ESYT1Q9BSJ8 1104 aa12.2□□□□□ -0.46
HFM1-202ENST00000427444 TIMMDC1Q9NPL8 285 aa12.2□□□□□ -0.46
HFM1-202ENST00000427444 SPATA31C2B4DYI2 1134 aa12.19□□□□□ -0.46
HFM1-202ENST00000427444 WASLO00401 505 aaPredicted RBP12.19□□□□□ -0.46
HFM1-202ENST00000427444 CENPCQ03188 943 aa12.19□□□□□ -0.46
HFM1-202ENST00000427444 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
HFM1-202ENST00000427444 TAS1R3Q7RTX0 852 aa12.19□□□□□ -0.46
HFM1-202ENST00000427444 PHTF2Q8N3S3 785 aa12.19□□□□□ -0.46
HFM1-202ENST00000427444 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
HFM1-202ENST00000427444 GTPBP3Q969Y2 492 aaKnown RBP12.18□□□□□ -0.46
HFM1-202ENST00000427444 GMCL1Q96IK5 515 aa12.18□□□□□ -0.46
HFM1-202ENST00000427444 H7C1W4 665 aa12.17□□□□□ -0.46
HFM1-202ENST00000427444 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
HFM1-202ENST00000427444 PHKA2P46019 1235 aa12.16□□□□□ -0.46
HFM1-202ENST00000427444 SRSF11Q05519 484 aaKnown RBP12.16□□□□□ -0.46
HFM1-202ENST00000427444 USP4Q13107 963 aa12.16□□□□□ -0.46
HFM1-202ENST00000427444 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
HFM1-202ENST00000427444 MCM6Q14566 821 aa12.15□□□□□ -0.46
HFM1-202ENST00000427444 WDR44Q5JSH3 913 aa12.15□□□□□ -0.46
HFM1-202ENST00000427444 XAGE2Q96GT9 111 aa12.15□□□□□ -0.46
HFM1-202ENST00000427444 F11P03951 625 aa12.14□□□□□ -0.47
HFM1-202ENST00000427444 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
HFM1-202ENST00000427444 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
HFM1-202ENST00000427444 ESCO1Q5FWF5 840 aa12.14□□□□□ -0.47
HFM1-202ENST00000427444 LYPD4Q6UWN0 246 aa12.14□□□□□ -0.47
HFM1-202ENST00000427444 GTF2E1P29083 439 aaPredicted RBP12.13□□□□□ -0.47
HFM1-202ENST00000427444 TMEM214Q6NUQ4 689 aaKnown RBP12.13□□□□□ -0.47
HFM1-202ENST00000427444 GPAMQ9HCL2 828 aa12.13□□□□□ -0.47
HFM1-202ENST00000427444 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
HFM1-202ENST00000427444 HRH3Q9Y5N1 445 aa12.13□□□□□ -0.47
HFM1-202ENST00000427444 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
HFM1-202ENST00000427444 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
HFM1-202ENST00000427444 TRERF1Q96PN7 1200 aa12.12□□□□□ -0.47
HFM1-202ENST00000427444 NUCKS1Q9H1E3 243 aaKnown RBP12.12□□□□□ -0.47
HFM1-202ENST00000427444 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
HFM1-202ENST00000427444 GNASQ5JWF2 1037 aa12.11□□□□□ -0.47
HFM1-202ENST00000427444 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
HFM1-202ENST00000427444 ETNK1Q9HBU6 452 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms