RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 NBPF6Q5VWK0 638 aa14.01□□□□□ -0.17
COMMD1-202ENST00000427417 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
COMMD1-202ENST00000427417 NBPF4Q96M43 638 aa14.01□□□□□ -0.17
COMMD1-202ENST00000427417 DOT1LQ8TEK3 1739 aa14□□□□□ -0.17
COMMD1-202ENST00000427417 PPM1GO15355 546 aaPredicted RBP13.99□□□□□ -0.17
COMMD1-202ENST00000427417 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
COMMD1-202ENST00000427417 TATP17735 454 aaPredicted RBP13.99□□□□□ -0.17
COMMD1-202ENST00000427417 PANK3Q9H999 370 aa13.99□□□□□ -0.17
COMMD1-202ENST00000427417 SPON1Q9HCB6 807 aa13.99□□□□□ -0.17
COMMD1-202ENST00000427417 EMILIN1Q9Y6C2 1016 aa13.99□□□□□ -0.17
COMMD1-202ENST00000427417 NSD2O96028 1365 aa13.98□□□□□ -0.17
COMMD1-202ENST00000427417 WASHC2AQ641Q2 1341 aa13.98□□□□□ -0.17
COMMD1-202ENST00000427417 STK32BQ9NY57 414 aa13.98□□□□□ -0.17
COMMD1-202ENST00000427417 PAPPAQ13219 1627 aa13.97□□□□□ -0.17
COMMD1-202ENST00000427417 SLC15A2Q16348 729 aa13.97□□□□□ -0.17
COMMD1-202ENST00000427417 SYTL4Q96C24 671 aaPredicted RBP13.97□□□□□ -0.17
COMMD1-202ENST00000427417 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
COMMD1-202ENST00000427417 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
COMMD1-202ENST00000427417 KCNQ4P56696 695 aa13.96□□□□□ -0.17
COMMD1-202ENST00000427417 LRRC4BQ9NT99 713 aa13.96□□□□□ -0.17
COMMD1-202ENST00000427417 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
COMMD1-202ENST00000427417 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
COMMD1-202ENST00000427417 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
COMMD1-202ENST00000427417 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
COMMD1-202ENST00000427417 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
COMMD1-202ENST00000427417 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
COMMD1-202ENST00000427417 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
COMMD1-202ENST00000427417 TNNT2P45379 298 aaPredicted RBP13.94□□□□□ -0.18
COMMD1-202ENST00000427417 SLC27A3Q5K4L6 730 aa13.94□□□□□ -0.18
COMMD1-202ENST00000427417 KNSTRNQ9Y448 316 aa13.94□□□□□ -0.18
COMMD1-202ENST00000427417 NCAPD2Q15021 1401 aa13.92□□□□□ -0.18
COMMD1-202ENST00000427417 PTGER2P43116 358 aa13.92□□□□□ -0.18
COMMD1-202ENST00000427417 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
COMMD1-202ENST00000427417 SPG7Q9UQ90 795 aa13.92□□□□□ -0.18
COMMD1-202ENST00000427417 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
COMMD1-202ENST00000427417 EYA1Q99502 592 aa13.91□□□□□ -0.18
COMMD1-202ENST00000427417 TUBGCP6Q96RT7 1819 aa13.91□□□□□ -0.18
COMMD1-202ENST00000427417 KIF7Q2M1P5 1343 aa13.9□□□□□ -0.18
COMMD1-202ENST00000427417 LY75O60449 1722 aa13.9□□□□□ -0.18
COMMD1-202ENST00000427417 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
COMMD1-202ENST00000427417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.18
COMMD1-202ENST00000427417 PLEKHG2Q9H7P9 1386 aa13.89□□□□□ -0.19
COMMD1-202ENST00000427417 CYP27B1O15528 508 aa13.89□□□□□ -0.19
COMMD1-202ENST00000427417 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
COMMD1-202ENST00000427417 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
COMMD1-202ENST00000427417 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
COMMD1-202ENST00000427417 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
COMMD1-202ENST00000427417 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
COMMD1-202ENST00000427417 SGIP1Q9BQI5 828 aa13.87□□□□□ -0.19
COMMD1-202ENST00000427417 CCNL1Q9UK58 526 aaPredicted RBP13.87□□□□□ -0.19
COMMD1-202ENST00000427417 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
COMMD1-202ENST00000427417 ITGB4P16144 1822 aa13.86□□□□□ -0.19
COMMD1-202ENST00000427417 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
COMMD1-202ENST00000427417 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
COMMD1-202ENST00000427417 IFNL2Q8IZJ0 200 aa13.86□□□□□ -0.19
COMMD1-202ENST00000427417 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
COMMD1-202ENST00000427417 IGSF1Q8N6C5 1336 aa13.86□□□□□ -0.19
COMMD1-202ENST00000427417 QSER1Q2KHR3 1735 aa13.85□□□□□ -0.19
COMMD1-202ENST00000427417 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
COMMD1-202ENST00000427417 SMARCC1Q92922 1105 aaPredicted RBP13.85□□□□□ -0.19
COMMD1-202ENST00000427417 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
COMMD1-202ENST00000427417 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
COMMD1-202ENST00000427417 PALLDQ8WX93 1383 aa13.83□□□□□ -0.19
COMMD1-202ENST00000427417 C5P01031 1676 aa13.83□□□□□ -0.2
COMMD1-202ENST00000427417 PHKG2P15735 406 aa13.83□□□□□ -0.2
COMMD1-202ENST00000427417 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
COMMD1-202ENST00000427417 PER1O15534 1290 aaPredicted RBP13.82□□□□□ -0.2
COMMD1-202ENST00000427417 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
COMMD1-202ENST00000427417 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
COMMD1-202ENST00000427417 ARXQ96QS3 562 aa13.82□□□□□ -0.2
COMMD1-202ENST00000427417 SYT17Q9BSW7 474 aa13.82□□□□□ -0.2
COMMD1-202ENST00000427417 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
COMMD1-202ENST00000427417 TAF1LQ8IZX4 1826 aa13.81□□□□□ -0.2
COMMD1-202ENST00000427417 YY1P25490 414 aa13.81□□□□□ -0.2
COMMD1-202ENST00000427417 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
COMMD1-202ENST00000427417 PIGBQ92521 554 aa13.81□□□□□ -0.2
COMMD1-202ENST00000427417 MSH5O43196 834 aa13.8□□□□□ -0.2
COMMD1-202ENST00000427417 POLD1P28340 1107 aa13.8□□□□□ -0.2
COMMD1-202ENST00000427417 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
COMMD1-202ENST00000427417 SMIM5Q71RC9 77 aa13.8□□□□□ -0.2
COMMD1-202ENST00000427417 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
COMMD1-202ENST00000427417 NPC1L1Q9UHC9 1359 aa13.8□□□□□ -0.2
COMMD1-202ENST00000427417 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 IL13P35225 146 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 MTHFSP49914 203 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 C1orf141Q5JVX7 400 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 MSL1Q68DK7 614 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 SULT6B1Q6IMI4 303 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 DCAF5Q96JK2 942 aa13.79□□□□□ -0.2
COMMD1-202ENST00000427417 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
COMMD1-202ENST00000427417 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
COMMD1-202ENST00000427417 AMIGO3Q86WK7 504 aa13.78□□□□□ -0.2
COMMD1-202ENST00000427417 KDRP35968 1356 aa13.78□□□□□ -0.2
COMMD1-202ENST00000427417 C4BP0C0L5 1744 aa13.78□□□□□ -0.2
COMMD1-202ENST00000427417 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
COMMD1-202ENST00000427417 AK7Q96M32 723 aa13.77□□□□□ -0.21
COMMD1-202ENST00000427417 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
COMMD1-202ENST00000427417 UTRNP46939 3433 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms