RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 AMOTQ4VCS5 1084 aa10.94□□□□□ -0.66
SH3D19-204ENST00000427414 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
SH3D19-204ENST00000427414 KIF16BQ96L93 1317 aa10.93□□□□□ -0.66
SH3D19-204ENST00000427414 SLAIN2Q9P270 581 aa10.93□□□□□ -0.66
SH3D19-204ENST00000427414 CRB1P82279 1406 aa10.93□□□□□ -0.66
SH3D19-204ENST00000427414 BRINP3Q76B58 766 aa10.93□□□□□ -0.66
SH3D19-204ENST00000427414 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
SH3D19-204ENST00000427414 HMOX1P09601 288 aa10.92□□□□□ -0.66
SH3D19-204ENST00000427414 FBLN1P23142 703 aa10.92□□□□□ -0.66
SH3D19-204ENST00000427414 EXOC6Q8TAG9 804 aa10.92□□□□□ -0.66
SH3D19-204ENST00000427414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.664e-9■■■□□ 14.8
SH3D19-204ENST00000427414 RRP7AQ9Y3A4 280 aaKnown RBP10.92□□□□□ -0.66
SH3D19-204ENST00000427414 CHL1O00533 1208 aa10.92□□□□□ -0.66
SH3D19-204ENST00000427414 CACNA1FO60840 1977 aa10.92□□□□□ -0.66
SH3D19-204ENST00000427414 IPO8O15397 1037 aaKnown RBP10.92□□□□□ -0.66
SH3D19-204ENST00000427414 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
SH3D19-204ENST00000427414 PKD1L3Q7Z443 1732 aa10.91□□□□□ -0.66
SH3D19-204ENST00000427414 BACH2Q9BYV9 841 aa10.91□□□□□ -0.66
SH3D19-204ENST00000427414 MAP3K5Q99683 1374 aa10.91□□□□□ -0.66
SH3D19-204ENST00000427414 PARP4Q9UKK3 1724 aaKnown RBP10.91□□□□□ -0.66
SH3D19-204ENST00000427414 NEUROD2Q15784 382 aa10.91□□□□□ -0.66
SH3D19-204ENST00000427414 CEMIPQ8WUJ3 1361 aa10.9□□□□□ -0.66
SH3D19-204ENST00000427414 GNAT3A8MTJ3 354 aa10.89□□□□□ -0.67
SH3D19-204ENST00000427414 RTF1Q92541 710 aaKnown RBP10.89□□□□□ -0.67
SH3D19-204ENST00000427414 KDM3BQ7LBC6 1761 aa10.89□□□□□ -0.67
SH3D19-204ENST00000427414 SIPA1L3O60292 1781 aaPredicted RBP10.89□□□□□ -0.67
SH3D19-204ENST00000427414 PLEKHO1Q53GL0 409 aaPredicted RBP10.89□□□□□ -0.67
SH3D19-204ENST00000427414 ZKSCAN2Q63HK3 967 aa10.89□□□□□ -0.67
SH3D19-204ENST00000427414 RGPD5Q99666 1765 aa10.88□□□□□ -0.67
SH3D19-204ENST00000427414 EIF5BO60841 1220 aaKnown RBP10.88□□□□□ -0.67
SH3D19-204ENST00000427414 HOXB7P09629 217 aa10.88□□□□□ -0.67
SH3D19-204ENST00000427414 EXOSC9Q06265 439 aaKnown RBP10.88□□□□□ -0.67
SH3D19-204ENST00000427414 AEBP1Q8IUX7 1158 aa10.88□□□□□ -0.67
SH3D19-204ENST00000427414 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
SH3D19-204ENST00000427414 RGPD2P0DJD1 1756 aa10.88□□□□□ -0.67
SH3D19-204ENST00000427414 ERBB3P21860 1342 aa10.88□□□□□ -0.67
SH3D19-204ENST00000427414 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
SH3D19-204ENST00000427414 N4BP2Q86UW6 1770 aaPredicted RBP10.87□□□□□ -0.67
SH3D19-204ENST00000427414 VAMP4O75379 141 aa10.87□□□□□ -0.67
SH3D19-204ENST00000427414 AKAP4Q5JQC9 854 aa10.87□□□□□ -0.67
SH3D19-204ENST00000427414 COL14A1Q05707 1796 aaKnown RBP10.87□□□□□ -0.67
SH3D19-204ENST00000427414 VIRMAQ69YN4 1812 aaKnown RBP10.87□□□□□ -0.67
SH3D19-204ENST00000427414 MBIPQ9NS73 344 aa10.87□□□□□ -0.67
SH3D19-204ENST00000427414 BRPF3Q9ULD4 1205 aa10.87□□□□□ -0.67
SH3D19-204ENST00000427414 GSE1Q14687 1217 aa10.86□□□□□ -0.67
SH3D19-204ENST00000427414 ANKRD24Q8TF21 1146 aa10.86□□□□□ -0.67
SH3D19-204ENST00000427414 ROBO1Q9Y6N7 1651 aa10.86□□□□□ -0.67
SH3D19-204ENST00000427414 CENPQQ7L2Z9 268 aaPredicted RBP10.86□□□□□ -0.67
SH3D19-204ENST00000427414 CRBNQ96SW2 442 aa10.86□□□□□ -0.67
SH3D19-204ENST00000427414 MRC1P22897 1456 aa10.86□□□□□ -0.67
SH3D19-204ENST00000427414 SCN11AQ9UI33 1791 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 BCAR3O75815 825 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 NBPF6Q5VWK0 638 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 NBPF4Q96M43 638 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 IBTKQ9P2D0 1353 aaPredicted RBP10.85□□□□□ -0.67
SH3D19-204ENST00000427414 NUTM2GQ5VZR2 741 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 PLCH1Q4KWH8 1693 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 PTPRCP08575 1304 aa10.85□□□□□ -0.67
SH3D19-204ENST00000427414 KCNA4P22459 653 aa10.84□□□□□ -0.67
SH3D19-204ENST00000427414 TAF7Q15545 349 aaPredicted RBP10.84□□□□□ -0.67
SH3D19-204ENST00000427414 DZIP1LQ8IYY4 767 aaKnown RBP10.84□□□□□ -0.67
SH3D19-204ENST00000427414 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
SH3D19-204ENST00000427414 KDM2BQ8NHM5 1336 aa10.84□□□□□ -0.67
SH3D19-204ENST00000427414 TWISTNBQ3B726 338 aaPredicted RBP10.83□□□□□ -0.68
SH3D19-204ENST00000427414 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
SH3D19-204ENST00000427414 SSH1Q8WYL5 1049 aa10.83□□□□□ -0.68
SH3D19-204ENST00000427414 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
SH3D19-204ENST00000427414 LRRC59Q96AG4 307 aaKnown RBP10.83□□□□□ -0.68
SH3D19-204ENST00000427414 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
SH3D19-204ENST00000427414 DDX19BQ9UMR2 479 aa10.83□□□□□ -0.68
SH3D19-204ENST00000427414 HSP90AB1P08238 724 aaKnown RBP10.83□□□□□ -0.68
SH3D19-204ENST00000427414 CANXP27824 592 aaKnown RBP10.83□□□□□ -0.68
SH3D19-204ENST00000427414 MVPQ14764 893 aaKnown RBP10.83□□□□□ -0.68
SH3D19-204ENST00000427414 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
SH3D19-204ENST00000427414 PXDNLA1KZ92 1463 aa10.82□□□□□ -0.68
SH3D19-204ENST00000427414 SPG7Q9UQ90 795 aa10.82□□□□□ -0.68
SH3D19-204ENST00000427414 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
SH3D19-204ENST00000427414 WDR17Q8IZU2 1322 aa10.81□□□□□ -0.68
SH3D19-204ENST00000427414 CLUAP1Q96AJ1 413 aa10.81□□□□□ -0.68
SH3D19-204ENST00000427414 COL16A1Q07092 1604 aaPredicted RBP10.81□□□□□ -0.68
SH3D19-204ENST00000427414 ABCC4O15439 1325 aa10.81□□□□□ -0.68
SH3D19-204ENST00000427414 SOX12O15370 315 aa10.81□□□□□ -0.68
SH3D19-204ENST00000427414 PLIN1O60240 522 aa10.81□□□□□ -0.68
SH3D19-204ENST00000427414 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
SH3D19-204ENST00000427414 SKAP1Q86WV1 359 aa10.81□□□□□ -0.68
SH3D19-204ENST00000427414 TATP17735 454 aaPredicted RBP10.81□□□□□ -0.68
SH3D19-204ENST00000427414 NWD2Q9ULI1 1742 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 HEG1Q9ULI3 1381 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 C1orf141Q5JVX7 400 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 C20orf194Q5TEA3 1177 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 FRAT1Q92837 279 aaPredicted RBP10.8□□□□□ -0.68
SH3D19-204ENST00000427414 AXIN2Q9Y2T1 843 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 PHLPP1O60346 1717 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 LRP6O75581 1613 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 XPCQ01831 940 aaPredicted RBP10.8□□□□□ -0.68
SH3D19-204ENST00000427414 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 UBE2Q2Q8WVN8 375 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 CARD10Q9BWT7 1032 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms