RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 GDPD2Q9HCC8 539 aa15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 MINK1Q8N4C8 1332 aaPredicted RBP15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 ERC2O15083 957 aa15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 C17orf53Q8N3J3 647 aaPredicted RBP15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 ARHGEF28Q8N1W1 1705 aaKnown RBP15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 FAM135BQ49AJ0 1406 aa15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 GGT6Q6P531 493 aa15.16■□□□□ 0.02
LRTOMT-206ENST00000427369 BRD1O95696 1058 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 DMTNQ08495 405 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 TPRNQ4KMQ1 711 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 ZNF710Q8N1W2 664 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 ANKRD44Q8N8A2 993 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 CBX1P83916 185 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 CHD1O14646 1710 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 RPGRIP1LQ68CZ1 1315 aa15.15■□□□□ 0.02
LRTOMT-206ENST00000427369 A0A0U1RQG5 324 aaPredicted RBP15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 GADD45BO75293 160 aaPredicted RBP15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 SYAP1Q96A49 352 aaPredicted RBP15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 ZSCAN20P17040 1043 aaPredicted RBP15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 NOLC1Q14978 699 aaKnown RBP eCLIP15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 TTC12Q9H892 705 aaPredicted RBP15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 USP25Q9UHP3 1055 aa15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 NPATQ14207 1427 aa15.14■□□□□ 0.01
LRTOMT-206ENST00000427369 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
LRTOMT-206ENST00000427369 ZNF853P0CG23 659 aa15.13■□□□□ 0.01
LRTOMT-206ENST00000427369 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
LRTOMT-206ENST00000427369 CAMSAP1Q5T5Y3 1602 aa15.13■□□□□ 0.01
LRTOMT-206ENST00000427369 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
LRTOMT-206ENST00000427369 PRIMPOLQ96LW4 560 aa15.12■□□□□ 0.01
LRTOMT-206ENST00000427369 FAM83GA6ND36 823 aa15.12■□□□□ 0.01
LRTOMT-206ENST00000427369 HDGFL2Q7Z4V5 671 aaPredicted RBP15.12■□□□□ 0.01
LRTOMT-206ENST00000427369 POLKQ9UBT6 870 aa15.12■□□□□ 0.01
LRTOMT-206ENST00000427369 DCTN1Q14203 1278 aa15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 UTP14CQ5TAP6 766 aaKnown RBP15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 RPAP2Q8IXW5 612 aaPredicted RBP15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 ARAP3Q8WWN8 1544 aa15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 HMGN5P82970 282 aaKnown RBP15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 PPP4R3BQ5MIZ7 849 aa15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 ATP10DQ9P241 1426 aa15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 PHF14O94880 888 aa15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 USP48Q86UV5 1035 aa15.11■□□□□ 0.01
LRTOMT-206ENST00000427369 CD163L1Q9NR16 1453 aa15.1■□□□□ 0.01
LRTOMT-206ENST00000427369 ADCY5O95622 1261 aa15.1■□□□□ 0.01
LRTOMT-206ENST00000427369 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
LRTOMT-206ENST00000427369 CABP1Q9NZU7 370 aa15.1■□□□□ 0.01
LRTOMT-206ENST00000427369 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
LRTOMT-206ENST00000427369 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
LRTOMT-206ENST00000427369 ANKRD26Q9UPS8 1709 aa15.1■□□□□ 0.01
LRTOMT-206ENST00000427369 ATP2B3Q16720 1220 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 LMTK2Q8IWU2 1503 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 CUL4AQ13619 759 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 MEIS3Q99687 375 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 KIF3AQ9Y496 699 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 KIF24Q5T7B8 1368 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 PLCB2Q00722 1185 aa15.09■□□□□ 0.01
LRTOMT-206ENST00000427369 ZFYVE9O95405 1425 aa15.08■□□□□ 0.01
LRTOMT-206ENST00000427369 MCM2P49736 904 aa15.08■□□□□ 0
LRTOMT-206ENST00000427369 HCLS1P14317 486 aaPredicted RBP15.08■□□□□ 0
LRTOMT-206ENST00000427369 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 0
LRTOMT-206ENST00000427369 EMILIN1Q9Y6C2 1016 aa15.08■□□□□ 0
LRTOMT-206ENST00000427369 UVSSAQ2YD98 709 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 FAM184AQ8NB25 1140 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 MSH6P52701 1360 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 PDE1AP54750 535 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 UPF3BQ9BZI7 483 aaKnown RBP15.07■□□□□ 0
LRTOMT-206ENST00000427369 BCL2L12Q9HB09 334 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 YEATS2Q9ULM3 1422 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 RTL1A6NKG5 1358 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
LRTOMT-206ENST00000427369 CDC42BPGQ6DT37 1551 aa15.06■□□□□ 0
LRTOMT-206ENST00000427369 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
LRTOMT-206ENST00000427369 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
LRTOMT-206ENST00000427369 MCCP23508 829 aa15.06■□□□□ 0
LRTOMT-206ENST00000427369 FKBP5Q13451 457 aaPredicted RBP15.06■□□□□ 0
LRTOMT-206ENST00000427369 CDK19Q9BWU1 502 aa15.06■□□□□ 0
LRTOMT-206ENST00000427369 ARHGEF40Q8TER5 1519 aa15.06■□□□□ 0
LRTOMT-206ENST00000427369 INTS4Q96HW7 963 aaKnown RBP15.05■□□□□ 0
LRTOMT-206ENST00000427369 ESYT1Q9BSJ8 1104 aa15.05■□□□□ 0
LRTOMT-206ENST00000427369 UHRF1BP1LA0JNW5 1464 aa15.05■□□□□ 0
LRTOMT-206ENST00000427369 KIDINS220Q9ULH0 1771 aa15.05■□□□□ -0
LRTOMT-206ENST00000427369 LMOD3Q0VAK6 560 aa15.05■□□□□ -0
LRTOMT-206ENST00000427369 RIMS2Q9UQ26 1411 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 ABCC3O15438 1527 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 IL13P35225 146 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 CCDC183Q5T5S1 534 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 SPTLC3Q9NUV7 552 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 RILPL2Q969X0 211 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 CNPY2Q9Y2B0 182 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 PDCL2Q8N4E4 241 aa15.04■□□□□ -0
LRTOMT-206ENST00000427369 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.04■□□□□ -0
LRTOMT-206ENST00000427369 GTPBP4Q9BZE4 634 aaKnown RBP15.04■□□□□ -0
LRTOMT-206ENST00000427369 WDR33Q9C0J8 1336 aaKnown RBP15.03■□□□□ -0
LRTOMT-206ENST00000427369 SRCIN1Q9C0H9 1055 aa15.03■□□□□ -0
LRTOMT-206ENST00000427369 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
LRTOMT-206ENST00000427369 RGS12O14924 1447 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms