RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
SMIM12-203ENST00000426886 LRRC37A3O60309 1634 aa16.84■□□□□ 0.29
SMIM12-203ENST00000426886 TNS2Q63HR2 1409 aa16.84■□□□□ 0.29
SMIM12-203ENST00000426886 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
SMIM12-203ENST00000426886 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
SMIM12-203ENST00000426886 KCNQ2O43526 872 aa16.83■□□□□ 0.28
SMIM12-203ENST00000426886 PRKRIP1Q9H875 184 aaPredicted RBP16.83■□□□□ 0.28
SMIM12-203ENST00000426886 OVOS2A0A0G2JMS6 1433 aa16.82■□□□□ 0.28
SMIM12-203ENST00000426886 SYTL4Q96C24 671 aaPredicted RBP16.82■□□□□ 0.28
SMIM12-203ENST00000426886 CYP27B1O15528 508 aa16.81■□□□□ 0.28
SMIM12-203ENST00000426886 APBA3O96018 575 aa16.81■□□□□ 0.28
SMIM12-203ENST00000426886 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
SMIM12-203ENST00000426886 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMIM12-203ENST00000426886 SPG7Q9UQ90 795 aa16.8■□□□□ 0.28
SMIM12-203ENST00000426886 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
SMIM12-203ENST00000426886 EN1Q05925 392 aaPredicted RBP16.8■□□□□ 0.28
SMIM12-203ENST00000426886 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
SMIM12-203ENST00000426886 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
SMIM12-203ENST00000426886 WNK3Q9BYP7 1800 aa16.79■□□□□ 0.28
SMIM12-203ENST00000426886 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
SMIM12-203ENST00000426886 PCDH11XQ9BZA7 1347 aa16.78■□□□□ 0.28
SMIM12-203ENST00000426886 PCDH11YQ9BZA8 1340 aa16.78■□□□□ 0.28
SMIM12-203ENST00000426886 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
SMIM12-203ENST00000426886 PRIM1P49642 420 aaKnown RBP16.78■□□□□ 0.28
SMIM12-203ENST00000426886 COL3A1P02461 1466 aaPredicted RBP16.77■□□□□ 0.28
SMIM12-203ENST00000426886 PLEKHO1Q53GL0 409 aaPredicted RBP16.77■□□□□ 0.28
SMIM12-203ENST00000426886 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.27
SMIM12-203ENST00000426886 BAG6P46379 1132 aa16.76■□□□□ 0.27
SMIM12-203ENST00000426886 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
SMIM12-203ENST00000426886 ANP32CO43423 234 aa16.76■□□□□ 0.27
SMIM12-203ENST00000426886 BCL11BQ9C0K0 894 aaPredicted RBP16.76■□□□□ 0.27
SMIM12-203ENST00000426886 KDRP35968 1356 aa16.75■□□□□ 0.27
SMIM12-203ENST00000426886 PHKG2P15735 406 aa16.75■□□□□ 0.27
SMIM12-203ENST00000426886 PRKAR2BP31323 418 aa16.75■□□□□ 0.27
SMIM12-203ENST00000426886 IFNL2Q8IZJ0 200 aa16.75■□□□□ 0.27
SMIM12-203ENST00000426886 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
SMIM12-203ENST00000426886 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
SMIM12-203ENST00000426886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMIM12-203ENST00000426886 MPRIPQ6WCQ1 1025 aa16.74■□□□□ 0.27
SMIM12-203ENST00000426886 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
SMIM12-203ENST00000426886 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
SMIM12-203ENST00000426886 PHACTR3Q96KR7 559 aa16.72■□□□□ 0.27
SMIM12-203ENST00000426886 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
SMIM12-203ENST00000426886 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
SMIM12-203ENST00000426886 RGPD1P0DJD0 1748 aa16.71■□□□□ 0.27
SMIM12-203ENST00000426886 BCL9O00512 1426 aa16.7■□□□□ 0.26
SMIM12-203ENST00000426886 CAMKK2Q96RR4 588 aa16.69■□□□□ 0.26
SMIM12-203ENST00000426886 FCHSD2O94868 740 aa16.69■□□□□ 0.26
SMIM12-203ENST00000426886 SHANK3Q9BYB0 1731 aa16.69■□□□□ 0.26
SMIM12-203ENST00000426886 NKX1-1Q15270 411 aaPredicted RBP16.68■□□□□ 0.26
SMIM12-203ENST00000426886 KCNQ4P56696 695 aa16.68■□□□□ 0.26
SMIM12-203ENST00000426886 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMIM12-203ENST00000426886 LGR6Q9HBX8 967 aa16.67■□□□□ 0.26
SMIM12-203ENST00000426886 PIGBQ92521 554 aa16.67■□□□□ 0.26
SMIM12-203ENST00000426886 DCAF5Q96JK2 942 aa16.67■□□□□ 0.26
SMIM12-203ENST00000426886 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
SMIM12-203ENST00000426886 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
SMIM12-203ENST00000426886 PLSCR1O15162 318 aa16.66■□□□□ 0.26
SMIM12-203ENST00000426886 HSP90AB1P08238 724 aaKnown RBP16.66■□□□□ 0.26
SMIM12-203ENST00000426886 CCDC146Q8IYE0 955 aa16.66■□□□□ 0.26
SMIM12-203ENST00000426886 PROM2Q8N271 834 aa16.66■□□□□ 0.26
SMIM12-203ENST00000426886 SBF2Q86WG5 1849 aa16.66■□□□□ 0.26
SMIM12-203ENST00000426886 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
SMIM12-203ENST00000426886 NEFMP07197 916 aa16.65■□□□□ 0.26
SMIM12-203ENST00000426886 CABP4P57796 275 aa16.65■□□□□ 0.26
SMIM12-203ENST00000426886 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
SMIM12-203ENST00000426886 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
SMIM12-203ENST00000426886 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
SMIM12-203ENST00000426886 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
SMIM12-203ENST00000426886 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
SMIM12-203ENST00000426886 TNS1Q9HBL0 1735 aaKnown RBP16.64■□□□□ 0.25
SMIM12-203ENST00000426886 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
SMIM12-203ENST00000426886 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
SMIM12-203ENST00000426886 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
SMIM12-203ENST00000426886 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
SMIM12-203ENST00000426886 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
SMIM12-203ENST00000426886 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
SMIM12-203ENST00000426886 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
SMIM12-203ENST00000426886 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
SMIM12-203ENST00000426886 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
SMIM12-203ENST00000426886 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
SMIM12-203ENST00000426886 ERVV-2B6SEH9 535 aa16.62■□□□□ 0.25
SMIM12-203ENST00000426886 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
SMIM12-203ENST00000426886 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
SMIM12-203ENST00000426886 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
SMIM12-203ENST00000426886 MCM10Q7L590 875 aa16.61■□□□□ 0.25
SMIM12-203ENST00000426886 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
SMIM12-203ENST00000426886 LRRC4BQ9NT99 713 aa16.61■□□□□ 0.25
SMIM12-203ENST00000426886 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
SMIM12-203ENST00000426886 RRP7AQ9Y3A4 280 aaKnown RBP16.6■□□□□ 0.25
SMIM12-203ENST00000426886 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
SMIM12-203ENST00000426886 RTF1Q92541 710 aaKnown RBP16.6■□□□□ 0.25
SMIM12-203ENST00000426886 MAP3K5Q99683 1374 aa16.59■□□□□ 0.25
SMIM12-203ENST00000426886 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
SMIM12-203ENST00000426886 BTAF1O14981 1849 aa16.59■□□□□ 0.25
SMIM12-203ENST00000426886 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
SMIM12-203ENST00000426886 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
SMIM12-203ENST00000426886 CCNL1Q9UK58 526 aaPredicted RBP16.59■□□□□ 0.25
SMIM12-203ENST00000426886 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
SMIM12-203ENST00000426886 PTCD1O75127 700 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms