RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 FAM208AQ9UK61 1670 aaKnown RBP21.3■■□□□ 1
LINC00116-202ENST00000426713 ANKRD36BQ8N2N9 1353 aa21.29■■□□□ 1
LINC00116-202ENST00000426713 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
LINC00116-202ENST00000426713 COL24A1Q17RW2 1714 aa21.29■■□□□ 1
LINC00116-202ENST00000426713 SHANK3Q9BYB0 1731 aa21.29■■□□□ 1
LINC00116-202ENST00000426713 YBX3P16989 372 aaKnown RBP eCLIP21.28■■□□□ 1
LINC00116-202ENST00000426713 IFFO2Q5TF58 517 aa21.28■■□□□ 1
LINC00116-202ENST00000426713 A0A1W2PP64 1363 aa21.27■■□□□ 1
LINC00116-202ENST00000426713 AMPHP49418 695 aa21.27■■□□□ 1
LINC00116-202ENST00000426713 MSL1Q68DK7 614 aa21.27■■□□□ 1
LINC00116-202ENST00000426713 LY75O60449 1722 aa21.26■□□□□ 0.99
LINC00116-202ENST00000426713 ZCRB1Q8TBF4 217 aaKnown RBP21.26■□□□□ 0.99
LINC00116-202ENST00000426713 USP47Q96K76 1375 aa21.25■□□□□ 0.99
LINC00116-202ENST00000426713 COL23A1Q86Y22 540 aaPredicted RBP21.25■□□□□ 0.99
LINC00116-202ENST00000426713 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
LINC00116-202ENST00000426713 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
LINC00116-202ENST00000426713 COG3Q96JB2 828 aa21.24■□□□□ 0.99
LINC00116-202ENST00000426713 HOXC9P31274 260 aa21.23■□□□□ 0.99
LINC00116-202ENST00000426713 NSD2O96028 1365 aa21.23■□□□□ 0.99
LINC00116-202ENST00000426713 FBLN1P23142 703 aa21.22■□□□□ 0.99
LINC00116-202ENST00000426713 MAP3K19Q56UN5 1328 aa21.22■□□□□ 0.99
LINC00116-202ENST00000426713 ATP10DQ9P241 1426 aa21.21■□□□□ 0.99
LINC00116-202ENST00000426713 GPBP1L1Q9HC44 474 aaPredicted RBP21.21■□□□□ 0.99
LINC00116-202ENST00000426713 MEGF6O75095 1541 aa21.2■□□□□ 0.98
LINC00116-202ENST00000426713 ZNF526Q8TF50 670 aaPredicted RBP21.2■□□□□ 0.98
LINC00116-202ENST00000426713 USHBP1Q8N6Y0 703 aa21.18■□□□□ 0.98
LINC00116-202ENST00000426713 RAPGEF4Q8WZA2 1011 aa21.18■□□□□ 0.98
LINC00116-202ENST00000426713 WWC3Q9ULE0 1092 aa21.17■□□□□ 0.98
LINC00116-202ENST00000426713 C5P01031 1676 aa21.17■□□□□ 0.98
LINC00116-202ENST00000426713 CD2APQ9Y5K6 639 aa21.16■□□□□ 0.98
LINC00116-202ENST00000426713 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
LINC00116-202ENST00000426713 NBPF6Q5VWK0 638 aa21.15■□□□□ 0.98
LINC00116-202ENST00000426713 NBPF4Q96M43 638 aa21.15■□□□□ 0.98
LINC00116-202ENST00000426713 TATP17735 454 aaPredicted RBP21.14■□□□□ 0.97
LINC00116-202ENST00000426713 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
LINC00116-202ENST00000426713 FLAD1Q8NFF5 587 aa21.14■□□□□ 0.97
LINC00116-202ENST00000426713 CEP350Q5VT06 3117 aa21.14■□□□□ 0.97
LINC00116-202ENST00000426713 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
LINC00116-202ENST00000426713 PUS7Q96PZ0 661 aaKnown RBP21.13■□□□□ 0.97
LINC00116-202ENST00000426713 CGNL1Q0VF96 1302 aa21.12■□□□□ 0.97
LINC00116-202ENST00000426713 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
LINC00116-202ENST00000426713 AK7Q96M32 723 aa21.12■□□□□ 0.97
LINC00116-202ENST00000426713 PALLDQ8WX93 1383 aa21.11■□□□□ 0.97
LINC00116-202ENST00000426713 PHF14O94880 888 aa21.11■□□□□ 0.97
LINC00116-202ENST00000426713 TAF1LQ8IZX4 1826 aa21.11■□□□□ 0.97
LINC00116-202ENST00000426713 RTL1A6NKG5 1358 aa21.1■□□□□ 0.97
LINC00116-202ENST00000426713 PCDH11XQ9BZA7 1347 aa21.1■□□□□ 0.97
LINC00116-202ENST00000426713 PCDH11YQ9BZA8 1340 aa21.1■□□□□ 0.97
LINC00116-202ENST00000426713 HSPA6P17066 643 aa21.1■□□□□ 0.97
LINC00116-202ENST00000426713 GGNBP2Q9H3C7 697 aa21.09■□□□□ 0.97
LINC00116-202ENST00000426713 TONSLQ96HA7 1378 aa21.09■□□□□ 0.97
LINC00116-202ENST00000426713 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
LINC00116-202ENST00000426713 ST20-MTHFSA0A0A6YYL1 179 aa21.07■□□□□ 0.96
LINC00116-202ENST00000426713 C4BP0C0L5 1744 aa21.07■□□□□ 0.96
LINC00116-202ENST00000426713 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
LINC00116-202ENST00000426713 SMARCC1Q92922 1105 aaPredicted RBP21.06■□□□□ 0.96
LINC00116-202ENST00000426713 HSP90AB2PQ58FF8 381 aa21.05■□□□□ 0.96
LINC00116-202ENST00000426713 ADCY9O60503 1353 aa21.05■□□□□ 0.96
LINC00116-202ENST00000426713 ITGB4P16144 1822 aa21.04■□□□□ 0.96
LINC00116-202ENST00000426713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.04■□□□□ 0.96
LINC00116-202ENST00000426713 TESK2Q96S53 571 aa21.04■□□□□ 0.96
LINC00116-202ENST00000426713 FYB1O15117 783 aa21.03■□□□□ 0.96
LINC00116-202ENST00000426713 CYP27B1O15528 508 aa21.02■□□□□ 0.96
LINC00116-202ENST00000426713 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
LINC00116-202ENST00000426713 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
LINC00116-202ENST00000426713 SLC24A1O60721 1099 aa21.01■□□□□ 0.95
LINC00116-202ENST00000426713 NSD3Q9BZ95 1437 aa21.01■□□□□ 0.95
LINC00116-202ENST00000426713 TOGARAM1Q9Y4F4 1720 aa21.01■□□□□ 0.95
LINC00116-202ENST00000426713 INSRP06213 1382 aa21■□□□□ 0.95
LINC00116-202ENST00000426713 FLT4P35916 1363 aa20.99■□□□□ 0.95
LINC00116-202ENST00000426713 PIGBQ92521 554 aa20.99■□□□□ 0.95
LINC00116-202ENST00000426713 PPM1GO15355 546 aaPredicted RBP20.98■□□□□ 0.95
LINC00116-202ENST00000426713 SSFA2P28290 1259 aa20.98■□□□□ 0.95
LINC00116-202ENST00000426713 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
LINC00116-202ENST00000426713 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
LINC00116-202ENST00000426713 GNPATO15228 680 aa20.97■□□□□ 0.95
LINC00116-202ENST00000426713 SIK1P57059 783 aa20.97■□□□□ 0.95
LINC00116-202ENST00000426713 LINC00116Q8NCU8 138 aa20.97■□□□□ 0.95
LINC00116-202ENST00000426713 KIF3CO14782 793 aa20.96■□□□□ 0.95
LINC00116-202ENST00000426713 TMOD3Q9NYL9 352 aa20.96■□□□□ 0.95
LINC00116-202ENST00000426713 SPG7Q9UQ90 795 aa20.96■□□□□ 0.95
LINC00116-202ENST00000426713 TMF1P82094 1093 aa20.95■□□□□ 0.94
LINC00116-202ENST00000426713 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
LINC00116-202ENST00000426713 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
LINC00116-202ENST00000426713 MMP10P09238 476 aa20.93■□□□□ 0.94
LINC00116-202ENST00000426713 BCS1LQ9Y276 419 aa20.93■□□□□ 0.94
LINC00116-202ENST00000426713 EMILIN1Q9Y6C2 1016 aa20.93■□□□□ 0.94
LINC00116-202ENST00000426713 APLP1P51693 650 aa20.92■□□□□ 0.94
LINC00116-202ENST00000426713 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
LINC00116-202ENST00000426713 KIF24Q5T7B8 1368 aa20.92■□□□□ 0.94
LINC00116-202ENST00000426713 MAP2P11137 1827 aaKnown RBP20.91■□□□□ 0.94
LINC00116-202ENST00000426713 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
LINC00116-202ENST00000426713 ITPK1Q13572 414 aa20.9■□□□□ 0.94
LINC00116-202ENST00000426713 NKX1-1Q15270 411 aaPredicted RBP20.9■□□□□ 0.94
LINC00116-202ENST00000426713 ARHGAP27Q6ZUM4 889 aa20.9■□□□□ 0.94
LINC00116-202ENST00000426713 A0A0G2JLW4 131 aa20.89■□□□□ 0.93
LINC00116-202ENST00000426713 TOMM70O94826 608 aa20.88■□□□□ 0.93
LINC00116-202ENST00000426713 PXDNLA1KZ92 1463 aa20.88■□□□□ 0.93
LINC00116-202ENST00000426713 CICQ96RK0 1608 aaPredicted RBP20.87■□□□□ 0.93
LINC00116-202ENST00000426713 CDCA8Q53HL2 280 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms