RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
CTCFL-206ENST00000426658 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
CTCFL-206ENST00000426658 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
CTCFL-206ENST00000426658 SDSP20132 328 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 ABCC1P33527 1531 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
CTCFL-206ENST00000426658 ZNF500O60304 480 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-206ENST00000426658 RPAP2Q8IXW5 612 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-206ENST00000426658 PHACTR3Q96KR7 559 aa12.41□□□□□ -0.42
CTCFL-206ENST00000426658 ABCA6Q8N139 1617 aa12.41□□□□□ -0.42
CTCFL-206ENST00000426658 GOLGA6L4A6NEF3 574 aa12.41□□□□□ -0.42
CTCFL-206ENST00000426658 F6X3S4 739 aa12.41□□□□□ -0.42
CTCFL-206ENST00000426658 MAP4K4O95819 1239 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-206ENST00000426658 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-206ENST00000426658 MCM2P49736 904 aa12.41□□□□□ -0.42
CTCFL-206ENST00000426658 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
CTCFL-206ENST00000426658 DCTPP1Q9H773 170 aa12.41□□□□□ -0.42
CTCFL-206ENST00000426658 FANCAO15360 1455 aa12.4□□□□□ -0.42
CTCFL-206ENST00000426658 FGD1P98174 961 aa12.4□□□□□ -0.42
CTCFL-206ENST00000426658 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
CTCFL-206ENST00000426658 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
CTCFL-206ENST00000426658 DRC7Q8IY82 874 aa12.4□□□□□ -0.42
CTCFL-206ENST00000426658 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
CTCFL-206ENST00000426658 TET3O43151 1660 aa12.39□□□□□ -0.43
CTCFL-206ENST00000426658 C8orf58Q8NAV2 365 aa12.39□□□□□ -0.43
CTCFL-206ENST00000426658 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-206ENST00000426658 PRDM10Q9NQV6 1147 aa12.39□□□□□ -0.43
CTCFL-206ENST00000426658 TMEM63CQ9P1W3 806 aa12.39□□□□□ -0.43
CTCFL-206ENST00000426658 CHD1O14646 1710 aa12.39□□□□□ -0.43
CTCFL-206ENST00000426658 SHROOM2Q13796 1616 aa12.39□□□□□ -0.43
CTCFL-206ENST00000426658 CHAMP1Q96JM3 812 aa12.38□□□□□ -0.43
CTCFL-206ENST00000426658 ATP7AQ04656 1500 aa12.38□□□□□ -0.43
CTCFL-206ENST00000426658 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
CTCFL-206ENST00000426658 GDPD2Q9HCC8 539 aa12.38□□□□□ -0.43
CTCFL-206ENST00000426658 IL1RAPL2Q9NP60 686 aa12.38□□□□□ -0.43
CTCFL-206ENST00000426658 HMGN5P82970 282 aaKnown RBP12.38□□□□□ -0.43
CTCFL-206ENST00000426658 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
CTCFL-206ENST00000426658 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
CTCFL-206ENST00000426658 KIAA1210Q9ULL0 1709 aa12.37□□□□□ -0.43
CTCFL-206ENST00000426658 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-206ENST00000426658 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-206ENST00000426658 ABCC4O15439 1325 aa12.37□□□□□ -0.43
CTCFL-206ENST00000426658 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
CTCFL-206ENST00000426658 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
CTCFL-206ENST00000426658 PDLIM2Q96JY6 352 aa12.36□□□□□ -0.43
CTCFL-206ENST00000426658 POLKQ9UBT6 870 aa12.36□□□□□ -0.43
CTCFL-206ENST00000426658 SHPRHQ149N8 1683 aa12.35□□□□□ -0.43
CTCFL-206ENST00000426658 HSPA2P54652 639 aa12.35□□□□□ -0.43
CTCFL-206ENST00000426658 VPS37CA5D8V6 355 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-206ENST00000426658 USP25Q9UHP3 1055 aa12.35□□□□□ -0.43
CTCFL-206ENST00000426658 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
CTCFL-206ENST00000426658 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
CTCFL-206ENST00000426658 ZNF830Q96NB3 372 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-206ENST00000426658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.35□□□□□ -0.439e-7■■□□□ 11.8
CTCFL-206ENST00000426658 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-206ENST00000426658 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-206ENST00000426658 DTNBO60941 627 aa12.34□□□□□ -0.43
CTCFL-206ENST00000426658 AEBP1Q8IUX7 1158 aa12.34□□□□□ -0.43
CTCFL-206ENST00000426658 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-206ENST00000426658 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
CTCFL-206ENST00000426658 MEIS3Q99687 375 aa12.34□□□□□ -0.43
CTCFL-206ENST00000426658 KIF1BO60333 1816 aa12.34□□□□□ -0.43
CTCFL-206ENST00000426658 FIBPO43427 364 aa12.34□□□□□ -0.43
CTCFL-206ENST00000426658 PSME1Q06323 249 aa12.34□□□□□ -0.43
CTCFL-206ENST00000426658 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
CTCFL-206ENST00000426658 SURF6O75683 361 aaKnown RBP12.34□□□□□ -0.43
CTCFL-206ENST00000426658 CYP2E1P05181 493 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-206ENST00000426658 GOLGA6L6A8MZA4 724 aa12.33□□□□□ -0.44
CTCFL-206ENST00000426658 SLC52A1Q9NWF4 448 aa12.33□□□□□ -0.44
CTCFL-206ENST00000426658 NSFL1CQ9UNZ2 370 aaKnown RBP12.33□□□□□ -0.44
CTCFL-206ENST00000426658 CFAP74Q9C0B2 1584 aa12.33□□□□□ -0.44
CTCFL-206ENST00000426658 ATF3P18847 181 aa12.32□□□□□ -0.44
CTCFL-206ENST00000426658 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-206ENST00000426658 KIF3AQ9Y496 699 aa12.32□□□□□ -0.44
CTCFL-206ENST00000426658 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
CTCFL-206ENST00000426658 SMAP1Q8IYB5 467 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-206ENST00000426658 LETM1O95202 739 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-206ENST00000426658 NUDT16Q96DE0 195 aaKnown RBP12.32□□□□□ -0.44
CTCFL-206ENST00000426658 PDE1AP54750 535 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTCFL-206ENST00000426658 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 PRIMPOLQ96LW4 560 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 PTCH1Q13635 1447 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 ADCY5O95622 1261 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 CBX1P83916 185 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-206ENST00000426658 ZDHHC9Q9Y397 364 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 QRICH2Q9H0J4 1663 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 GNAI2P04899 355 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 UBTFL1P0CB47 393 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-206ENST00000426658 FOSBP53539 338 aa12.31□□□□□ -0.44
CTCFL-206ENST00000426658 EVA1CP58658 441 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms