RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 SMG6Q86US8 1419 aaKnown RBP27.82■■■□□ 2.04
CCDC107-206ENST00000426546 SHANK3Q9BYB0 1731 aa27.81■■■□□ 2.04
CCDC107-206ENST00000426546 CCER1Q8TC90 406 aaPredicted RBP27.8■■■□□ 2.04
CCDC107-206ENST00000426546 INSRP06213 1382 aa27.79■■■□□ 2.04
CCDC107-206ENST00000426546 FLT4P35916 1363 aa27.79■■■□□ 2.04
CCDC107-206ENST00000426546 MEGF6O75095 1541 aa27.78■■■□□ 2.04
CCDC107-206ENST00000426546 DDX54Q8TDD1 881 aaKnown RBP27.77■■■□□ 2.04
CCDC107-206ENST00000426546 ANKRD26Q9UPS8 1709 aa27.77■■■□□ 2.04
CCDC107-206ENST00000426546 ZNF827Q17R98 1081 aa27.76■■■□□ 2.03
CCDC107-206ENST00000426546 LRRC4BQ9NT99 713 aa27.76■■■□□ 2.03
CCDC107-206ENST00000426546 DOT1LQ8TEK3 1739 aa27.75■■■□□ 2.03
CCDC107-206ENST00000426546 EIF4G2P78344 907 aaKnown RBP eCLIP27.75■■■□□ 2.03
CCDC107-206ENST00000426546 NBPF6Q5VWK0 638 aa27.75■■■□□ 2.03
CCDC107-206ENST00000426546 NBPF4Q96M43 638 aa27.75■■■□□ 2.03
CCDC107-206ENST00000426546 CGNL1Q0VF96 1302 aa27.74■■■□□ 2.03
CCDC107-206ENST00000426546 ZCRB1Q8TBF4 217 aaKnown RBP27.74■■■□□ 2.03
CCDC107-206ENST00000426546 ARXQ96QS3 562 aa27.73■■■□□ 2.03
CCDC107-206ENST00000426546 HSP90AB2PQ58FF8 381 aa27.72■■■□□ 2.03
CCDC107-206ENST00000426546 UTRNP46939 3433 aa27.71■■■□□ 2.03
CCDC107-206ENST00000426546 ZNF784Q8NCA9 323 aaPredicted RBP27.71■■■□□ 2.03
CCDC107-206ENST00000426546 MAP2P11137 1827 aaKnown RBP27.7■■■□□ 2.02
CCDC107-206ENST00000426546 HSPA5P11021 654 aaKnown RBP27.7■■■□□ 2.02
CCDC107-206ENST00000426546 RAPGEF4Q8WZA2 1011 aa27.7■■■□□ 2.02
CCDC107-206ENST00000426546 MAP3K5Q99683 1374 aa27.7■■■□□ 2.02
CCDC107-206ENST00000426546 USHBP1Q8N6Y0 703 aa27.69■■■□□ 2.02
CCDC107-206ENST00000426546 AKT1S1Q96B36 256 aa27.69■■■□□ 2.02
CCDC107-206ENST00000426546 EMILIN1Q9Y6C2 1016 aa27.69■■■□□ 2.02
CCDC107-206ENST00000426546 CHD4Q14839 1912 aa27.67■■■□□ 2.02
CCDC107-206ENST00000426546 POLR3GLQ9BT43 218 aa27.67■■■□□ 2.02
CCDC107-206ENST00000426546 QSER1Q2KHR3 1735 aa27.67■■■□□ 2.02
CCDC107-206ENST00000426546 TATP17735 454 aaPredicted RBP27.66■■■□□ 2.02
CCDC107-206ENST00000426546 SLC27A3Q5K4L6 730 aa27.66■■■□□ 2.02
CCDC107-206ENST00000426546 LY75O60449 1722 aa27.65■■■□□ 2.02
CCDC107-206ENST00000426546 NCAPD2Q15021 1401 aa27.65■■■□□ 2.02
CCDC107-206ENST00000426546 NSD2O96028 1365 aa27.64■■■□□ 2.02
CCDC107-206ENST00000426546 PRIM1P49642 420 aaKnown RBP27.64■■■□□ 2.02
CCDC107-206ENST00000426546 PKD1L3Q7Z443 1732 aa27.64■■■□□ 2.01
CCDC107-206ENST00000426546 SLC16A10Q8TF71 515 aa27.63■■■□□ 2.01
CCDC107-206ENST00000426546 SYTL4Q96C24 671 aaPredicted RBP27.63■■■□□ 2.01
CCDC107-206ENST00000426546 WASHC2AQ641Q2 1341 aa27.63■■■□□ 2.01
CCDC107-206ENST00000426546 COL24A1Q17RW2 1714 aa27.62■■■□□ 2.01
CCDC107-206ENST00000426546 PNPLA7Q6ZV29 1317 aa27.62■■■□□ 2.01
CCDC107-206ENST00000426546 PCDH11XQ9BZA7 1347 aa27.62■■■□□ 2.01
CCDC107-206ENST00000426546 PCDH11YQ9BZA8 1340 aa27.62■■■□□ 2.01
CCDC107-206ENST00000426546 KCNQ4P56696 695 aa27.61■■■□□ 2.01
CCDC107-206ENST00000426546 TUBGCP6Q96RT7 1819 aa27.61■■■□□ 2.01
CCDC107-206ENST00000426546 PPM1GO15355 546 aaPredicted RBP27.6■■■□□ 2.01
CCDC107-206ENST00000426546 POLKQ9UBT6 870 aa27.58■■■□□ 2.01
CCDC107-206ENST00000426546 PANK3Q9H999 370 aa27.56■■■□□ 2
CCDC107-206ENST00000426546 TFCP2L1Q9NZI6 479 aa27.56■■■□□ 2
CCDC107-206ENST00000426546 POLD1P28340 1107 aa27.55■■■□□ 2
CCDC107-206ENST00000426546 GPR162Q16538 588 aa27.54■■■□□ 2
CCDC107-206ENST00000426546 KLHL34Q8N239 644 aa27.54■■■□□ 2
CCDC107-206ENST00000426546 TOGARAM1Q9Y4F4 1720 aa27.53■■■□□ 2
CCDC107-206ENST00000426546 CYP27B1O15528 508 aa27.53■■■□□ 2
CCDC107-206ENST00000426546 ITGB4P16144 1822 aa27.53■■■□□ 2
CCDC107-206ENST00000426546 EYA1Q99502 592 aa27.52■■■□□ 2
CCDC107-206ENST00000426546 TNNT2P45379 298 aaPredicted RBP27.51■■□□□ 1.99
CCDC107-206ENST00000426546 CCNL1Q9UK58 526 aaPredicted RBP27.5■■□□□ 1.99
CCDC107-206ENST00000426546 PLEKHG2Q9H7P9 1386 aa27.49■■□□□ 1.99
CCDC107-206ENST00000426546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.49■■□□□ 1.99
CCDC107-206ENST00000426546 SPG7Q9UQ90 795 aa27.49■■□□□ 1.99
CCDC107-206ENST00000426546 NLGN2Q8NFZ4 835 aa27.48■■□□□ 1.99
CCDC107-206ENST00000426546 C5P01031 1676 aa27.48■■□□□ 1.99
CCDC107-206ENST00000426546 C1QTNF8P60827 252 aa27.47■■□□□ 1.99
CCDC107-206ENST00000426546 EIF4A2Q14240 407 aaKnown RBP27.47■■□□□ 1.99
CCDC107-206ENST00000426546 NKX1-1Q15270 411 aaPredicted RBP27.46■■□□□ 1.99
CCDC107-206ENST00000426546 TAF1LQ8IZX4 1826 aa27.46■■□□□ 1.99
CCDC107-206ENST00000426546 PELP1Q8IZL8 1130 aaKnown RBP27.45■■□□□ 1.98
CCDC107-206ENST00000426546 GOLGB1Q14789 3259 aaKnown RBP27.45■■□□□ 1.98
CCDC107-206ENST00000426546 COL23A1Q86Y22 540 aaPredicted RBP27.44■■□□□ 1.98
CCDC107-206ENST00000426546 PALLDQ8WX93 1383 aa27.44■■□□□ 1.98
CCDC107-206ENST00000426546 HMGB2P26583 209 aaKnown RBP27.43■■□□□ 1.98
CCDC107-206ENST00000426546 MPRIPQ6WCQ1 1025 aa27.43■■□□□ 1.98
CCDC107-206ENST00000426546 KNSTRNQ9Y448 316 aa27.43■■□□□ 1.98
CCDC107-206ENST00000426546 IGSF1Q8N6C5 1336 aa27.42■■□□□ 1.98
CCDC107-206ENST00000426546 SENP3-EIF4A1A0A087X0R7 540 aa27.42■■□□□ 1.98
CCDC107-206ENST00000426546 MORC1Q86VD1 984 aa27.42■■□□□ 1.98
CCDC107-206ENST00000426546 MSH5O43196 834 aa27.41■■□□□ 1.98
CCDC107-206ENST00000426546 SMARCC1Q92922 1105 aaPredicted RBP27.4■■□□□ 1.98
CCDC107-206ENST00000426546 KIF7Q2M1P5 1343 aa27.4■■□□□ 1.98
CCDC107-206ENST00000426546 PHKG2P15735 406 aa27.38■■□□□ 1.97
CCDC107-206ENST00000426546 YBX3P16989 372 aaKnown RBP eCLIP27.38■■□□□ 1.97
CCDC107-206ENST00000426546 IFNL2Q8IZJ0 200 aa27.38■■□□□ 1.97
CCDC107-206ENST00000426546 MSL1Q68DK7 614 aa27.37■■□□□ 1.97
CCDC107-206ENST00000426546 PIGBQ92521 554 aa27.37■■□□□ 1.97
CCDC107-206ENST00000426546 C4BP0C0L5 1744 aa27.36■■□□□ 1.97
CCDC107-206ENST00000426546 AMER1Q5JTC6 1135 aaPredicted RBP27.35■■□□□ 1.97
CCDC107-206ENST00000426546 GIGYF1O75420 1035 aaPredicted RBP27.34■■□□□ 1.97
CCDC107-206ENST00000426546 TMOD3Q9NYL9 352 aa27.34■■□□□ 1.97
CCDC107-206ENST00000426546 GRIN3BO60391 1043 aa27.33■■□□□ 1.97
CCDC107-206ENST00000426546 FLAD1Q8NFF5 587 aa27.31■■□□□ 1.96
CCDC107-206ENST00000426546 UBR3Q6ZT12 1888 aa27.31■■□□□ 1.96
CCDC107-206ENST00000426546 AMOTQ4VCS5 1084 aa27.28■■□□□ 1.96
CCDC107-206ENST00000426546 PLEKHO1Q53GL0 409 aaPredicted RBP27.28■■□□□ 1.96
CCDC107-206ENST00000426546 CD2APQ9Y5K6 639 aa27.28■■□□□ 1.96
CCDC107-206ENST00000426546 KDRP35968 1356 aa27.27■■□□□ 1.96
CCDC107-206ENST00000426546 LOC102724428A0A0B4J2F2 783 aa27.27■■□□□ 1.96
CCDC107-206ENST00000426546 HSP90AB1P08238 724 aaKnown RBP27.27■■□□□ 1.96
CCDC107-206ENST00000426546 SIK1P57059 783 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms