RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 COG3Q96JB2 828 aa20.73■□□□□ 0.91
PDAP1-202ENST00000426447 A0A1W2PP64 1363 aa20.72■□□□□ 0.91
PDAP1-202ENST00000426447 USP54Q70EL1 1684 aa20.7■□□□□ 0.91
PDAP1-202ENST00000426447 HOXC9P31274 260 aa20.7■□□□□ 0.9
PDAP1-202ENST00000426447 COL23A1Q86Y22 540 aaPredicted RBP20.7■□□□□ 0.9
PDAP1-202ENST00000426447 MAP3K19Q56UN5 1328 aa20.7■□□□□ 0.9
PDAP1-202ENST00000426447 USP47Q96K76 1375 aa20.7■□□□□ 0.9
PDAP1-202ENST00000426447 YBX3P16989 372 aaKnown RBP eCLIP20.69■□□□□ 0.94e-9■■□□□ 11.5
PDAP1-202ENST00000426447 FBLN1P23142 703 aa20.69■□□□□ 0.9
PDAP1-202ENST00000426447 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
PDAP1-202ENST00000426447 MSL1Q68DK7 614 aa20.68■□□□□ 0.9
PDAP1-202ENST00000426447 HMGB2P26583 209 aaKnown RBP20.66■□□□□ 0.9
PDAP1-202ENST00000426447 IFFO2Q5TF58 517 aa20.66■□□□□ 0.9
PDAP1-202ENST00000426447 NSD2O96028 1365 aa20.66■□□□□ 0.9
PDAP1-202ENST00000426447 QSER1Q2KHR3 1735 aa20.66■□□□□ 0.9
PDAP1-202ENST00000426447 RAPGEF4Q8WZA2 1011 aa20.65■□□□□ 0.9
PDAP1-202ENST00000426447 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
PDAP1-202ENST00000426447 USHBP1Q8N6Y0 703 aa20.63■□□□□ 0.89
PDAP1-202ENST00000426447 FLAD1Q8NFF5 587 aa20.63■□□□□ 0.89
PDAP1-202ENST00000426447 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
PDAP1-202ENST00000426447 CGNL1Q0VF96 1302 aa20.62■□□□□ 0.89
PDAP1-202ENST00000426447 FAM208AQ9UK61 1670 aaKnown RBP20.62■□□□□ 0.89
PDAP1-202ENST00000426447 TATP17735 454 aaPredicted RBP20.62■□□□□ 0.89
PDAP1-202ENST00000426447 GPBP1L1Q9HC44 474 aaPredicted RBP20.62■□□□□ 0.89
PDAP1-202ENST00000426447 CD2APQ9Y5K6 639 aa20.62■□□□□ 0.89
PDAP1-202ENST00000426447 RRS1Q15050 365 aaKnown RBP20.61■□□□□ 0.89
PDAP1-202ENST00000426447 MEGF6O75095 1541 aa20.61■□□□□ 0.89
PDAP1-202ENST00000426447 COL24A1Q17RW2 1714 aa20.61■□□□□ 0.89
PDAP1-202ENST00000426447 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
PDAP1-202ENST00000426447 SLC24A1O60721 1099 aa20.6■□□□□ 0.89
PDAP1-202ENST00000426447 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
PDAP1-202ENST00000426447 SHANK3Q9BYB0 1731 aa20.59■□□□□ 0.89
PDAP1-202ENST00000426447 ATP10DQ9P241 1426 aa20.59■□□□□ 0.89
PDAP1-202ENST00000426447 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
PDAP1-202ENST00000426447 LY75O60449 1722 aa20.58■□□□□ 0.89
PDAP1-202ENST00000426447 TUBGCP6Q96RT7 1819 aa20.58■□□□□ 0.89
PDAP1-202ENST00000426447 ST20-MTHFSA0A0A6YYL1 179 aa20.58■□□□□ 0.89
PDAP1-202ENST00000426447 ZNF526Q8TF50 670 aaPredicted RBP20.58■□□□□ 0.89
PDAP1-202ENST00000426447 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
PDAP1-202ENST00000426447 SMG6Q86US8 1419 aaKnown RBP20.58■□□□□ 0.88
PDAP1-202ENST00000426447 AK7Q96M32 723 aa20.57■□□□□ 0.88
PDAP1-202ENST00000426447 RTL1A6NKG5 1358 aa20.57■□□□□ 0.88
PDAP1-202ENST00000426447 PCDH11XQ9BZA7 1347 aa20.56■□□□□ 0.88
PDAP1-202ENST00000426447 PCDH11YQ9BZA8 1340 aa20.56■□□□□ 0.88
PDAP1-202ENST00000426447 TESK2Q96S53 571 aa20.56■□□□□ 0.88
PDAP1-202ENST00000426447 PALLDQ8WX93 1383 aa20.56■□□□□ 0.88
PDAP1-202ENST00000426447 GOLGB1Q14789 3259 aaKnown RBP20.55■□□□□ 0.88
PDAP1-202ENST00000426447 FYB1O15117 783 aa20.55■□□□□ 0.88
PDAP1-202ENST00000426447 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
PDAP1-202ENST00000426447 WWC3Q9ULE0 1092 aa20.54■□□□□ 0.88
PDAP1-202ENST00000426447 PHF14O94880 888 aa20.53■□□□□ 0.88
PDAP1-202ENST00000426447 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
PDAP1-202ENST00000426447 RGPD2P0DJD1 1756 aa20.52■□□□□ 0.88
PDAP1-202ENST00000426447 HSPA6P17066 643 aa20.51■□□□□ 0.87
PDAP1-202ENST00000426447 CYP27B1O15528 508 aa20.5■□□□□ 0.87
PDAP1-202ENST00000426447 IGSF1Q8N6C5 1336 aa20.5■□□□□ 0.87
PDAP1-202ENST00000426447 INSRP06213 1382 aa20.49■□□□□ 0.87
PDAP1-202ENST00000426447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.49■□□□□ 0.87
PDAP1-202ENST00000426447 SMIM5Q71RC9 77 aa20.49■□□□□ 0.87
PDAP1-202ENST00000426447 TMF1P82094 1093 aa20.48■□□□□ 0.87
PDAP1-202ENST00000426447 PIGBQ92521 554 aa20.48■□□□□ 0.87
PDAP1-202ENST00000426447 C5P01031 1676 aa20.48■□□□□ 0.87
PDAP1-202ENST00000426447 FLT4P35916 1363 aa20.46■□□□□ 0.87
PDAP1-202ENST00000426447 AMIGO3Q86WK7 504 aa20.46■□□□□ 0.87
PDAP1-202ENST00000426447 SPG7Q9UQ90 795 aa20.46■□□□□ 0.87
PDAP1-202ENST00000426447 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
PDAP1-202ENST00000426447 PPM1GO15355 546 aaPredicted RBP20.45■□□□□ 0.86
PDAP1-202ENST00000426447 SSFA2P28290 1259 aa20.45■□□□□ 0.86
PDAP1-202ENST00000426447 ADCY9O60503 1353 aa20.45■□□□□ 0.86
PDAP1-202ENST00000426447 LOC102724428A0A0B4J2F2 783 aa20.44■□□□□ 0.86
PDAP1-202ENST00000426447 SIK1P57059 783 aa20.44■□□□□ 0.86
PDAP1-202ENST00000426447 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
PDAP1-202ENST00000426447 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
PDAP1-202ENST00000426447 C4BP0C0L5 1744 aa20.42■□□□□ 0.86
PDAP1-202ENST00000426447 GNPATO15228 680 aa20.42■□□□□ 0.86
PDAP1-202ENST00000426447 NKX1-1Q15270 411 aaPredicted RBP20.42■□□□□ 0.86
PDAP1-202ENST00000426447 LINC00116Q8NCU8 138 aa20.42■□□□□ 0.86
PDAP1-202ENST00000426447 CEP350Q5VT06 3117 aa20.41■□□□□ 0.86
PDAP1-202ENST00000426447 ATP6V1AP38606 617 aa20.41■□□□□ 0.86
PDAP1-202ENST00000426447 CDCA8Q53HL2 280 aa20.41■□□□□ 0.86
PDAP1-202ENST00000426447 EMILIN1Q9Y6C2 1016 aa20.41■□□□□ 0.86
PDAP1-202ENST00000426447 KIF3CO14782 793 aa20.39■□□□□ 0.85
PDAP1-202ENST00000426447 ASAP1Q9ULH1 1129 aa20.39■□□□□ 0.85
PDAP1-202ENST00000426447 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.85
PDAP1-202ENST00000426447 MMP10P09238 476 aa20.38■□□□□ 0.85
PDAP1-202ENST00000426447 ITPK1Q13572 414 aa20.37■□□□□ 0.85
PDAP1-202ENST00000426447 TRAPPC3LQ5T215 181 aa20.36■□□□□ 0.85
PDAP1-202ENST00000426447 IFNL2Q8IZJ0 200 aa20.36■□□□□ 0.85
PDAP1-202ENST00000426447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.36■□□□□ 0.859e-9■□□□□ 9.3
PDAP1-202ENST00000426447 BCS1LQ9Y276 419 aa20.36■□□□□ 0.85
PDAP1-202ENST00000426447 APLP1P51693 650 aa20.35■□□□□ 0.85
PDAP1-202ENST00000426447 TGFB2P61812 414 aa20.35■□□□□ 0.85
PDAP1-202ENST00000426447 ARHGAP27Q6ZUM4 889 aa20.35■□□□□ 0.85
PDAP1-202ENST00000426447 EYA1Q99502 592 aa20.35■□□□□ 0.85
PDAP1-202ENST00000426447 CARD14Q9BXL6 1004 aa20.35■□□□□ 0.85
PDAP1-202ENST00000426447 A0A0G2JLW4 131 aa20.34■□□□□ 0.85
PDAP1-202ENST00000426447 NLGN1Q8N2Q7 840 aa20.34■□□□□ 0.85
PDAP1-202ENST00000426447 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
PDAP1-202ENST00000426447 RTCBQ9Y3I0 505 aaKnown RBP20.34■□□□□ 0.85
PDAP1-202ENST00000426447 WASHC2AQ641Q2 1341 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms