RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 ONECUT3O60422 494 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 SKIV2LQ15477 1246 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 EYA1Q99502 592 aa9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 BEGAINQ9BUH8 593 aa9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 SPON1Q9HCB6 807 aa9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 FAM198AQ9UFP1 575 aa9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 EIF2AK4Q9P2K8 1649 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-207ENST00000426253 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-207ENST00000426253 MARF1Q9Y4F3 1742 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-207ENST00000426253 IDI1Q13907 227 aa9.31□□□□□ -0.92
NIF3L1-207ENST00000426253 EZH2Q15910 746 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-207ENST00000426253 PLEKHG1Q9ULL1 1385 aa9.31□□□□□ -0.92
NIF3L1-207ENST00000426253 ADGRB3O60242 1522 aa9.31□□□□□ -0.92
NIF3L1-207ENST00000426253 CROCC2H7BZ55 1655 aa9.3□□□□□ -0.92
NIF3L1-207ENST00000426253 ADGRL2O95490 1459 aa9.3□□□□□ -0.92
NIF3L1-207ENST00000426253 UNC5CLQ8IV45 518 aa9.3□□□□□ -0.92
NIF3L1-207ENST00000426253 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
NIF3L1-207ENST00000426253 CCDC9Q9Y3X0 531 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-207ENST00000426253 CHD4Q14839 1912 aa9.3□□□□□ -0.92
NIF3L1-207ENST00000426253 ANKRD50Q9ULJ7 1429 aa9.3□□□□□ -0.92
NIF3L1-207ENST00000426253 RCCD1A6NED2 376 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 OTUD5Q96G74 571 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 TBX22Q9Y458 520 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 ARHGAP31Q2M1Z3 1444 aa9.29□□□□□ -0.92
NIF3L1-207ENST00000426253 COL22A1Q8NFW1 1626 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-207ENST00000426253 KCNQ2O43526 872 aa9.28□□□□□ -0.92
NIF3L1-207ENST00000426253 FLIIQ13045 1269 aa9.28□□□□□ -0.92
NIF3L1-207ENST00000426253 DIXDC1Q155Q3 683 aa9.28□□□□□ -0.92
NIF3L1-207ENST00000426253 ROCK1Q13464 1354 aa9.27□□□□□ -0.93
NIF3L1-207ENST00000426253 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
NIF3L1-207ENST00000426253 NUDT18Q6ZVK8 323 aa9.27□□□□□ -0.93
NIF3L1-207ENST00000426253 TATDN2Q93075 761 aa9.27□□□□□ -0.93
NIF3L1-207ENST00000426253 AMOTL2Q9Y2J4 779 aa9.27□□□□□ -0.93
NIF3L1-207ENST00000426253 DNAJB2P25686 324 aa9.26□□□□□ -0.93
NIF3L1-207ENST00000426253 HDGFP51858 240 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-207ENST00000426253 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
NIF3L1-207ENST00000426253 PCDH10Q9P2E7 1040 aa9.26□□□□□ -0.93
NIF3L1-207ENST00000426253 MYOM2P54296 1465 aa9.26□□□□□ -0.93
NIF3L1-207ENST00000426253 SOS2Q07890 1332 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-207ENST00000426253 TRPM2O94759 1503 aa9.26□□□□□ -0.93
NIF3L1-207ENST00000426253 RIMS2Q9UQ26 1411 aa9.25□□□□□ -0.93
NIF3L1-207ENST00000426253 NBPF8Q3BBV2 869 aa9.25□□□□□ -0.93
NIF3L1-207ENST00000426253 NBPF14Q5TI25 921 aa9.25□□□□□ -0.93
NIF3L1-207ENST00000426253 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
NIF3L1-207ENST00000426253 TNS1Q9HBL0 1735 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-207ENST00000426253 NUP155O75694 1391 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 DISP2A7MBM2 1401 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 RPRD2Q5VT52 1461 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 FAM182BQ5T319 152 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 UTRNP46939 3433 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 LMTK2Q8IWU2 1503 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
NIF3L1-207ENST00000426253 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
NIF3L1-207ENST00000426253 RRBP1Q9P2E9 1410 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-207ENST00000426253 SLIT2O94813 1529 aa9.23□□□□□ -0.93
NIF3L1-207ENST00000426253 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
NIF3L1-207ENST00000426253 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
NIF3L1-207ENST00000426253 MYO5BQ9ULV0 1848 aa9.23□□□□□ -0.93
NIF3L1-207ENST00000426253 LAMC1P11047 1609 aa9.23□□□□□ -0.93
NIF3L1-207ENST00000426253 ADAMTS13Q76LX8 1427 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 CD46P15529 392 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 PRELPP51888 382 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 CAMKK2Q96RR4 588 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 TBC1D2Q9BYX2 928 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 TMEM134Q9H6X4 195 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
NIF3L1-207ENST00000426253 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.93
NIF3L1-207ENST00000426253 VPS72Q15906 364 aa9.21□□□□□ -0.94
NIF3L1-207ENST00000426253 PROCA1Q8NCQ7 364 aaPredicted RBP9.21□□□□□ -0.94
NIF3L1-207ENST00000426253 ORAI2Q96SN7 254 aa9.21□□□□□ -0.94
NIF3L1-207ENST00000426253 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.94
NIF3L1-207ENST00000426253 NOS1P29475 1434 aa9.21□□□□□ -0.94
NIF3L1-207ENST00000426253 PTPRUQ92729 1446 aa9.21□□□□□ -0.94
NIF3L1-207ENST00000426253 GCC2Q8IWJ2 1684 aa9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 NUP188Q5SRE5 1749 aa9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 ARHGAP33O14559 1287 aa9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 APBA3O96018 575 aa9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 HSPA6P17066 643 aa9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 FAM98CQ17RN3 349 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 PROX2Q3B8N5 592 aa9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 LHX8Q68G74 356 aa9.2□□□□□ -0.94
NIF3L1-207ENST00000426253 NALCNQ8IZF0 1738 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 TRIM37O94972 964 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 TUSC1Q2TAM9 212 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 TNS4Q8IZW8 715 aa9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
NIF3L1-207ENST00000426253 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms