RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 TPCN2Q8NHX9 752 aa10.23□□□□□ -0.77
SSBP3-207ENST00000426150 SIRT1Q96EB6 747 aa10.23□□□□□ -0.77
SSBP3-207ENST00000426150 RBM19Q9Y4C8 960 aaKnown RBP10.23□□□□□ -0.77
SSBP3-207ENST00000426150 PPEF1O14829 653 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-207ENST00000426150 USP4Q13107 963 aa10.22□□□□□ -0.77
SSBP3-207ENST00000426150 RNF166Q96A37 237 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-207ENST00000426150 PSME1Q06323 249 aa10.21□□□□□ -0.77
SSBP3-207ENST00000426150 C1orf216Q8TAB5 229 aa10.21□□□□□ -0.77
SSBP3-207ENST00000426150 ZNF428Q96B54 188 aa10.21□□□□□ -0.77
SSBP3-207ENST00000426150 MYO15BQ96JP2 1530 aa10.21□□□□□ -0.78
SSBP3-207ENST00000426150 SFI1A8K8P3 1242 aa10.2□□□□□ -0.78
SSBP3-207ENST00000426150 ZBTB24O43167 697 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-207ENST00000426150 RBM25P49756 843 aaKnown RBP10.2□□□□□ -0.78
SSBP3-207ENST00000426150 TRIM32Q13049 653 aa10.2□□□□□ -0.78
SSBP3-207ENST00000426150 KCTD15Q96SI1 283 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-207ENST00000426150 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
SSBP3-207ENST00000426150 PRMT3O60678 531 aa10.19□□□□□ -0.78
SSBP3-207ENST00000426150 SCNN1AP37088 669 aa10.19□□□□□ -0.78
SSBP3-207ENST00000426150 SERPINB4P48594 390 aa10.19□□□□□ -0.78
SSBP3-207ENST00000426150 OCLNQ16625 522 aa10.19□□□□□ -0.78
SSBP3-207ENST00000426150 SOWAHDA6NJG2 315 aa10.18□□□□□ -0.78
SSBP3-207ENST00000426150 RAB15P59190 212 aa10.18□□□□□ -0.78
SSBP3-207ENST00000426150 KCNC4Q03721 635 aa10.18□□□□□ -0.78
SSBP3-207ENST00000426150 PRIMPOLQ96LW4 560 aa10.18□□□□□ -0.78
SSBP3-207ENST00000426150 VARSP26640 1264 aaKnown RBP10.17□□□□□ -0.78
SSBP3-207ENST00000426150 WNT7BP56706 349 aa10.17□□□□□ -0.78
SSBP3-207ENST00000426150 SKOR1P84550 965 aa10.17□□□□□ -0.78
SSBP3-207ENST00000426150 PLA2G2CQ5R387 149 aa10.17□□□□□ -0.78
SSBP3-207ENST00000426150 ANKLE1Q8NAG6 615 aa10.17□□□□□ -0.78
SSBP3-207ENST00000426150 CXXC1Q9P0U4 656 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-207ENST00000426150 AMOTL2Q9Y2J4 779 aa10.17□□□□□ -0.78
SSBP3-207ENST00000426150 MAP4K5Q9Y4K4 846 aa10.17□□□□□ -0.78
SSBP3-207ENST00000426150 CUX2O14529 1486 aa10.17□□□□□ -0.78
SSBP3-207ENST00000426150 ITGBL1O95965 494 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-207ENST00000426150 MYCP01106 439 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-207ENST00000426150 INTS6LQ5JSJ4 861 aaKnown RBP10.16□□□□□ -0.78
SSBP3-207ENST00000426150 TAS1R3Q7RTX0 852 aa10.16□□□□□ -0.78
SSBP3-207ENST00000426150 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
SSBP3-207ENST00000426150 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
SSBP3-207ENST00000426150 VASH1Q7L8A9 365 aaPredicted RBP10.15□□□□□ -0.78
SSBP3-207ENST00000426150 ERVH48-1M5A8F1 160 aa10.14□□□□□ -0.79
SSBP3-207ENST00000426150 GGCXP38435 758 aa10.14□□□□□ -0.79
SSBP3-207ENST00000426150 SCTRP47872 440 aa10.14□□□□□ -0.79
SSBP3-207ENST00000426150 HINFPQ9BQA5 517 aa10.14□□□□□ -0.79
SSBP3-207ENST00000426150 M0R2N6 131 aa10.13□□□□□ -0.79
SSBP3-207ENST00000426150 LGR5O75473 907 aa10.13□□□□□ -0.79
SSBP3-207ENST00000426150 TSEN2Q8NCE0 465 aaKnown RBP10.13□□□□□ -0.79
SSBP3-207ENST00000426150 SCRIBQ14160 1630 aa10.13□□□□□ -0.79
SSBP3-207ENST00000426150 RPIAP49247 311 aa10.12□□□□□ -0.79
SSBP3-207ENST00000426150 ERCC6Q03468 1493 aa10.11□□□□□ -0.79
SSBP3-207ENST00000426150 ERVK-9P63128 1117 aa10.11□□□□□ -0.79
SSBP3-207ENST00000426150 EHBP1Q8NDI1 1231 aa10.11□□□□□ -0.79
SSBP3-207ENST00000426150 WEE1P30291 646 aa10.1□□□□□ -0.79
SSBP3-207ENST00000426150 DNAJC14Q6Y2X3 702 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-207ENST00000426150 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP3-207ENST00000426150 CDK15Q96Q40 435 aa10.1□□□□□ -0.79
SSBP3-207ENST00000426150 ZNF358Q9NW07 568 aa10.1□□□□□ -0.79
SSBP3-207ENST00000426150 EGFL7Q9UHF1 273 aa10.1□□□□□ -0.79
SSBP3-207ENST00000426150 ABL1P00519 1130 aa10.09□□□□□ -0.79
SSBP3-207ENST00000426150 ARID5BQ14865 1188 aa10.09□□□□□ -0.79
SSBP3-207ENST00000426150 CC2D2BQ6DHV5 1058 aa10.09□□□□□ -0.79
SSBP3-207ENST00000426150 ESF1Q9H501 851 aaKnown RBP10.09□□□□□ -0.79
SSBP3-207ENST00000426150 BIN2Q9UBW5 565 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-207ENST00000426150 TMEM229AB2RXF0 380 aa10.08□□□□□ -0.8
SSBP3-207ENST00000426150 E9PSI1 815 aa10.08□□□□□ -0.8
SSBP3-207ENST00000426150 FSHRP23945 695 aa10.08□□□□□ -0.8
SSBP3-207ENST00000426150 RC3H1Q5TC82 1133 aaKnown RBP10.08□□□□□ -0.8
SSBP3-207ENST00000426150 PPP1R18Q6NYC8 613 aa10.08□□□□□ -0.8
SSBP3-207ENST00000426150 CD2BP2O95400 341 aaKnown RBP10.07□□□□□ -0.8
SSBP3-207ENST00000426150 ERCC3P19447 782 aa10.07□□□□□ -0.8
SSBP3-207ENST00000426150 GRM5P41594 1212 aa10.07□□□□□ -0.8
SSBP3-207ENST00000426150 MARSP56192 900 aaKnown RBP10.07□□□□□ -0.8
SSBP3-207ENST00000426150 ZNF211Q13398 564 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-207ENST00000426150 FKBP5Q13451 457 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-207ENST00000426150 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
SSBP3-207ENST00000426150 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
SSBP3-207ENST00000426150 TMPRSS4Q9NRS4 437 aa10.07□□□□□ -0.8
SSBP3-207ENST00000426150 SEPT3Q9UH03 358 aa10.07□□□□□ -0.8
SSBP3-207ENST00000426150 ICMTO60725 284 aa10.06□□□□□ -0.8
SSBP3-207ENST00000426150 SCNN1DP51172 638 aa10.06□□□□□ -0.8
SSBP3-207ENST00000426150 DHX9Q08211 1270 aaKnown RBP10.06□□□□□ -0.8
SSBP3-207ENST00000426150 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
SSBP3-207ENST00000426150 MKNK1Q9BUB5 465 aa10.06□□□□□ -0.8
SSBP3-207ENST00000426150 CYLDQ9NQC7 956 aa10.06□□□□□ -0.8
SSBP3-207ENST00000426150 H3BRB1 525 aa10.05□□□□□ -0.8
SSBP3-207ENST00000426150 WASLO00401 505 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-207ENST00000426150 NOM1Q5C9Z4 860 aaKnown RBP10.05□□□□□ -0.8
SSBP3-207ENST00000426150 MPNDQ8N594 471 aa10.05□□□□□ -0.8
SSBP3-207ENST00000426150 GTF3C2Q8WUA4 911 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-207ENST00000426150 TRIM52Q96A61 297 aa10.05□□□□□ -0.8
SSBP3-207ENST00000426150 TUT1Q9H6E5 874 aaKnown RBP10.05□□□□□ -0.8
SSBP3-207ENST00000426150 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
SSBP3-207ENST00000426150 TLL2Q9Y6L7 1015 aa10.05□□□□□ -0.8
SSBP3-207ENST00000426150 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
SSBP3-207ENST00000426150 STAU1O95793 577 aaKnown RBP10.04□□□□□ -0.8
SSBP3-207ENST00000426150 GDF10P55107 478 aa10.04□□□□□ -0.8
SSBP3-207ENST00000426150 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
SSBP3-207ENST00000426150 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-207ENST00000426150 DNMT3AQ9Y6K1 912 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-207ENST00000426150 BACH1O14867 736 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms