RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 SERPINA10Q9UK55 444 aa6.29□□□□□ -1.4
HDAC2-202ENST00000425835 MAFBQ9Y5Q3 323 aaPredicted RBP6.29□□□□□ -1.4
HDAC2-202ENST00000425835 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
HDAC2-202ENST00000425835 ERVK-9P63128 1117 aa6.28□□□□□ -1.4
HDAC2-202ENST00000425835 RELBQ01201 579 aa6.28□□□□□ -1.4
HDAC2-202ENST00000425835 USP4Q13107 963 aa6.28□□□□□ -1.4
HDAC2-202ENST00000425835 CDCA8Q53HL2 280 aa6.28□□□□□ -1.4
HDAC2-202ENST00000425835 C6orf118Q5T5N4 469 aa6.28□□□□□ -1.4
HDAC2-202ENST00000425835 CHIC2Q9UKJ5 165 aa6.28□□□□□ -1.4
HDAC2-202ENST00000425835 PSME1Q06323 249 aa6.27□□□□□ -1.41
HDAC2-202ENST00000425835 CTC1Q2NKJ3 1217 aa6.27□□□□□ -1.41
HDAC2-202ENST00000425835 CFAP70Q5T0N1 1121 aa6.27□□□□□ -1.41
HDAC2-202ENST00000425835 TRIM52Q96A61 297 aa6.27□□□□□ -1.41
HDAC2-202ENST00000425835 AAASQ9NRG9 546 aa6.27□□□□□ -1.41
HDAC2-202ENST00000425835 NOD1Q9Y239 953 aa6.27□□□□□ -1.41
HDAC2-202ENST00000425835 UPP2O95045 317 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 ADH1AP07327 375 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 CYP2U1Q7Z449 544 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 PLEKHM2Q8IWE5 1019 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 MEIOBQ8N635 442 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 SIRT1Q96EB6 747 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 OSBPL3Q9H4L5 887 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 ZNF395Q9H8N7 513 aaPredicted RBP6.26□□□□□ -1.41
HDAC2-202ENST00000425835 MKRN1Q9UHC7 482 aaKnown RBP6.26□□□□□ -1.41
HDAC2-202ENST00000425835 DACH1Q9UI36 760 aa6.26□□□□□ -1.41
HDAC2-202ENST00000425835 ATP5J2-PTCD1G3V325 749 aa6.25□□□□□ -1.41
HDAC2-202ENST00000425835 STAU1O95793 577 aaKnown RBP6.25□□□□□ -1.41
HDAC2-202ENST00000425835 BMP2P12643 396 aa6.25□□□□□ -1.41
HDAC2-202ENST00000425835 GTF2IP78347 998 aa6.25□□□□□ -1.41
HDAC2-202ENST00000425835 MRPL14Q6P1L8 145 aaKnown RBP6.25□□□□□ -1.41
HDAC2-202ENST00000425835 Q6ZVU0 165 aa6.25□□□□□ -1.41
HDAC2-202ENST00000425835 LINC00528Q8N1L1 170 aa6.25□□□□□ -1.41
HDAC2-202ENST00000425835 PURBQ96QR8 312 aaKnown RBP6.25□□□□□ -1.41
HDAC2-202ENST00000425835 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
HDAC2-202ENST00000425835 RAB6BQ9NRW1 208 aa6.25□□□□□ -1.41
HDAC2-202ENST00000425835 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.24□□□□□ -1.41
HDAC2-202ENST00000425835 MEN1O00255 615 aa6.24□□□□□ -1.41
HDAC2-202ENST00000425835 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
HDAC2-202ENST00000425835 TRIM46Q7Z4K8 759 aa6.24□□□□□ -1.41
HDAC2-202ENST00000425835 CRIPAKQ8N1N5 446 aa6.24□□□□□ -1.41
HDAC2-202ENST00000425835 ZNF594Q96JF6 807 aaPredicted RBP6.24□□□□□ -1.41
HDAC2-202ENST00000425835 LZTS3O60299 673 aaPredicted RBP6.23□□□□□ -1.41
HDAC2-202ENST00000425835 RASA1P20936 1047 aa6.23□□□□□ -1.41
HDAC2-202ENST00000425835 PTGIRP43119 386 aa6.23□□□□□ -1.41
HDAC2-202ENST00000425835 SCARF1Q14162 830 aa6.23□□□□□ -1.41
HDAC2-202ENST00000425835 TRIM50Q86XT4 487 aa6.23□□□□□ -1.41
HDAC2-202ENST00000425835 TSEN34Q9BSV6 310 aaKnown RBP6.23□□□□□ -1.41
HDAC2-202ENST00000425835 VRTNQ9H8Y1 702 aa6.23□□□□□ -1.41
HDAC2-202ENST00000425835 ATP13A2Q9NQ11 1180 aa6.23□□□□□ -1.41
HDAC2-202ENST00000425835 POTECB2RU33 542 aa6.22□□□□□ -1.41
HDAC2-202ENST00000425835 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
HDAC2-202ENST00000425835 LARP1Q6PKG0 1096 aaKnown RBP6.22□□□□□ -1.41
HDAC2-202ENST00000425835 TREML4Q6UXN2 200 aa6.22□□□□□ -1.41
HDAC2-202ENST00000425835 OGFOD1Q8N543 542 aa6.22□□□□□ -1.41
HDAC2-202ENST00000425835 KDF1Q8NAX2 398 aaPredicted RBP6.22□□□□□ -1.41
HDAC2-202ENST00000425835 ZFP42Q96MM3 310 aa6.22□□□□□ -1.41
HDAC2-202ENST00000425835 INSM2Q96T92 566 aaPredicted RBP6.22□□□□□ -1.41
HDAC2-202ENST00000425835 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
HDAC2-202ENST00000425835 DNAAF2Q9NVR5 837 aaKnown RBP6.22□□□□□ -1.41
HDAC2-202ENST00000425835 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
HDAC2-202ENST00000425835 A0A1W2PRU2 124 aa6.21□□□□□ -1.42
HDAC2-202ENST00000425835 ATP1A2P50993 1020 aa6.21□□□□□ -1.42
HDAC2-202ENST00000425835 CLDN10P78369 228 aa6.21□□□□□ -1.42
HDAC2-202ENST00000425835 KANK4Q5T7N3 995 aaPredicted RBP6.21□□□□□ -1.42
HDAC2-202ENST00000425835 TPCN2Q8NHX9 752 aa6.21□□□□□ -1.42
HDAC2-202ENST00000425835 ETNK1Q9HBU6 452 aa6.21□□□□□ -1.42
HDAC2-202ENST00000425835 GMPR2Q9P2T1 348 aaKnown RBP6.21□□□□□ -1.42
HDAC2-202ENST00000425835 SERTAD1Q9UHV2 236 aa6.21□□□□□ -1.42
HDAC2-202ENST00000425835 KIAA1024Q9UPX6 916 aa6.21□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L15C9J2P7 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L10C9JJH3 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L13C9JLJ4 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L12C9JPN9 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L11C9JVI0 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L21D6R901 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L18D6R9N7 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L22D6RA61 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L17D6RBQ6 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L19D6RCP7 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L20D6RJB6 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 GNRH1P01148 92 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 CTSOP43234 321 aaPredicted RBP6.2□□□□□ -1.42
HDAC2-202ENST00000425835 GDF10P55107 478 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 USP17L24Q0WX57 530 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 CRTC2Q53ET0 693 aaPredicted RBP6.2□□□□□ -1.42
HDAC2-202ENST00000425835 PBXIP1Q96AQ6 731 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 NLRP3Q96P20 1036 aa6.2□□□□□ -1.42
HDAC2-202ENST00000425835 RBM19Q9Y4C8 960 aaKnown RBP6.2□□□□□ -1.42
HDAC2-202ENST00000425835 FIGNL2A6NMB9 653 aa6.19□□□□□ -1.42
HDAC2-202ENST00000425835 SPINT1O43278 529 aa6.19□□□□□ -1.42
HDAC2-202ENST00000425835 IL2RAP01589 272 aa6.19□□□□□ -1.42
HDAC2-202ENST00000425835 SCNN1DP51172 638 aa6.19□□□□□ -1.42
HDAC2-202ENST00000425835 ESCO1Q5FWF5 840 aa6.19□□□□□ -1.42
HDAC2-202ENST00000425835 CCDC102BQ68D86 513 aa6.19□□□□□ -1.42
HDAC2-202ENST00000425835 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
HDAC2-202ENST00000425835 TTLL8A6PVC2 850 aa6.18□□□□□ -1.42
HDAC2-202ENST00000425835 SOBPA7XYQ1 873 aa6.18□□□□□ -1.42
HDAC2-202ENST00000425835 SFI1A8K8P3 1242 aa6.18□□□□□ -1.42
HDAC2-202ENST00000425835 ZBTB7BO15156 539 aaPredicted RBP6.18□□□□□ -1.42
HDAC2-202ENST00000425835 CLN3Q13286 438 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms