RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
LINC01006-203ENST00000425712 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
LINC01006-203ENST00000425712 GLI3P10071 1580 aa12.5□□□□□ -0.41
LINC01006-203ENST00000425712 TNS2Q63HR2 1409 aa12.49□□□□□ -0.41
LINC01006-203ENST00000425712 BARGINQ6ZT62 677 aa12.49□□□□□ -0.41
LINC01006-203ENST00000425712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01006-203ENST00000425712 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
LINC01006-203ENST00000425712 THSD7AQ9UPZ6 1657 aa12.48□□□□□ -0.41
LINC01006-203ENST00000425712 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
LINC01006-203ENST00000425712 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
LINC01006-203ENST00000425712 PLEKHO1Q53GL0 409 aaPredicted RBP12.48□□□□□ -0.41
LINC01006-203ENST00000425712 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
LINC01006-203ENST00000425712 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
LINC01006-203ENST00000425712 NFE2L2Q16236 605 aa12.47□□□□□ -0.41
LINC01006-203ENST00000425712 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
LINC01006-203ENST00000425712 SHANK3Q9BYB0 1731 aa12.46□□□□□ -0.41
LINC01006-203ENST00000425712 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
LINC01006-203ENST00000425712 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
LINC01006-203ENST00000425712 APAF1O14727 1248 aa12.46□□□□□ -0.41
LINC01006-203ENST00000425712 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC01006-203ENST00000425712 QTRT2Q9H974 415 aaKnown RBP12.46□□□□□ -0.41
LINC01006-203ENST00000425712 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
LINC01006-203ENST00000425712 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
LINC01006-203ENST00000425712 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
LINC01006-203ENST00000425712 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
LINC01006-203ENST00000425712 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
LINC01006-203ENST00000425712 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
LINC01006-203ENST00000425712 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
LINC01006-203ENST00000425712 CCDC27Q2M243 656 aa12.44□□□□□ -0.42
LINC01006-203ENST00000425712 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
LINC01006-203ENST00000425712 ZCRB1Q8TBF4 217 aaKnown RBP12.44□□□□□ -0.42
LINC01006-203ENST00000425712 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
LINC01006-203ENST00000425712 ZBED9Q6R2W3 1325 aa12.43□□□□□ -0.42
LINC01006-203ENST00000425712 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
LINC01006-203ENST00000425712 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
LINC01006-203ENST00000425712 RIPK4P57078 832 aa12.43□□□□□ -0.42
LINC01006-203ENST00000425712 DDB1Q16531 1140 aa12.43□□□□□ -0.42
LINC01006-203ENST00000425712 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
LINC01006-203ENST00000425712 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
LINC01006-203ENST00000425712 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
LINC01006-203ENST00000425712 A0A0G2JS52 829 aa12.42□□□□□ -0.42
LINC01006-203ENST00000425712 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
LINC01006-203ENST00000425712 EXOC5O00471 708 aa12.42□□□□□ -0.42
LINC01006-203ENST00000425712 MYT1Q01538 1121 aa12.42□□□□□ -0.42
LINC01006-203ENST00000425712 RTF1Q92541 710 aaKnown RBP12.42□□□□□ -0.42
LINC01006-203ENST00000425712 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
LINC01006-203ENST00000425712 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
LINC01006-203ENST00000425712 PHKG2P15735 406 aa12.41□□□□□ -0.42
LINC01006-203ENST00000425712 CALD1Q05682 793 aaKnown RBP12.41□□□□□ -0.42
LINC01006-203ENST00000425712 NEUROD2Q15784 382 aa12.41□□□□□ -0.42
LINC01006-203ENST00000425712 YTHDC1Q96MU7 727 aaKnown RBP12.41□□□□□ -0.42
LINC01006-203ENST00000425712 RXRBP28702 533 aa12.4□□□□□ -0.42
LINC01006-203ENST00000425712 MRC1P22897 1456 aa12.4□□□□□ -0.43
LINC01006-203ENST00000425712 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
LINC01006-203ENST00000425712 CYP27B1O15528 508 aa12.39□□□□□ -0.43
LINC01006-203ENST00000425712 RGS17Q9UGC6 210 aaPredicted RBP12.39□□□□□ -0.43
LINC01006-203ENST00000425712 TRIM35Q9UPQ4 493 aa12.39□□□□□ -0.43
LINC01006-203ENST00000425712 VIRMAQ69YN4 1812 aaKnown RBP12.39□□□□□ -0.43
LINC01006-203ENST00000425712 ZNF521Q96K83 1311 aa12.38□□□□□ -0.43
LINC01006-203ENST00000425712 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
LINC01006-203ENST00000425712 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
LINC01006-203ENST00000425712 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
LINC01006-203ENST00000425712 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
LINC01006-203ENST00000425712 SEPT12Q8IYM1 358 aa12.38□□□□□ -0.43
LINC01006-203ENST00000425712 DDX54Q8TDD1 881 aaKnown RBP12.38□□□□□ -0.43
LINC01006-203ENST00000425712 DCAF5Q96JK2 942 aa12.38□□□□□ -0.43
LINC01006-203ENST00000425712 SALL2Q9Y467 1007 aaPredicted RBP12.38□□□□□ -0.43
LINC01006-203ENST00000425712 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
LINC01006-203ENST00000425712 IL16Q14005 1332 aa12.37□□□□□ -0.43
LINC01006-203ENST00000425712 RGS12O14924 1447 aa12.37□□□□□ -0.43
LINC01006-203ENST00000425712 WDR63Q8IWG1 891 aa12.37□□□□□ -0.43
LINC01006-203ENST00000425712 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
LINC01006-203ENST00000425712 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
LINC01006-203ENST00000425712 BCL9O00512 1426 aa12.37□□□□□ -0.43
LINC01006-203ENST00000425712 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
LINC01006-203ENST00000425712 TEFQ10587 303 aa12.36□□□□□ -0.43
LINC01006-203ENST00000425712 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
LINC01006-203ENST00000425712 SIPA1L3O60292 1781 aaPredicted RBP12.35□□□□□ -0.43
LINC01006-203ENST00000425712 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
LINC01006-203ENST00000425712 GOLGA2Q08379 1002 aa12.35□□□□□ -0.43
LINC01006-203ENST00000425712 MPRIPQ6WCQ1 1025 aa12.35□□□□□ -0.43
LINC01006-203ENST00000425712 MCM10Q7L590 875 aa12.35□□□□□ -0.43
LINC01006-203ENST00000425712 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
LINC01006-203ENST00000425712 ERVV-2B6SEH9 535 aa12.34□□□□□ -0.43
LINC01006-203ENST00000425712 GNAI1P63096 354 aa12.34□□□□□ -0.43
LINC01006-203ENST00000425712 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
LINC01006-203ENST00000425712 MARCH10Q8NA82 808 aaPredicted RBP12.34□□□□□ -0.43
LINC01006-203ENST00000425712 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
LINC01006-203ENST00000425712 IFT57Q9NWB7 429 aa12.34□□□□□ -0.43
LINC01006-203ENST00000425712 NHSQ6T4R5 1651 aa12.33□□□□□ -0.44
LINC01006-203ENST00000425712 E9PSI1 815 aa12.33□□□□□ -0.44
LINC01006-203ENST00000425712 KRT27Q7Z3Y8 459 aa12.33□□□□□ -0.44
LINC01006-203ENST00000425712 MYH16Q9H6N6 1097 aa12.33□□□□□ -0.44
LINC01006-203ENST00000425712 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
LINC01006-203ENST00000425712 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
LINC01006-203ENST00000425712 CABP4P57796 275 aa12.32□□□□□ -0.44
LINC01006-203ENST00000425712 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
LINC01006-203ENST00000425712 THUMPD2Q9BTF0 503 aaKnown RBP12.32□□□□□ -0.44
LINC01006-203ENST00000425712 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
LINC01006-203ENST00000425712 KDM3BQ7LBC6 1761 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms