RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 QSER1Q2KHR3 1735 aa21.1■□□□□ 0.97
ATG4B-209ENST00000425239 ARXQ96QS3 562 aa21.1■□□□□ 0.97
ATG4B-209ENST00000425239 LY75O60449 1722 aa21.09■□□□□ 0.97
ATG4B-209ENST00000425239 KCNQ4P56696 695 aa21.09■□□□□ 0.97
ATG4B-209ENST00000425239 ZCRB1Q8TBF4 217 aaKnown RBP21.09■□□□□ 0.97
ATG4B-209ENST00000425239 PNPLA7Q6ZV29 1317 aa21.08■□□□□ 0.97
ATG4B-209ENST00000425239 AMPHP49418 695 aa21.08■□□□□ 0.97
ATG4B-209ENST00000425239 RRS1Q15050 365 aaKnown RBP21.08■□□□□ 0.97
ATG4B-209ENST00000425239 GGNBP2Q9H3C7 697 aa21.07■□□□□ 0.96
ATG4B-209ENST00000425239 RTL1A6NKG5 1358 aa21.07■□□□□ 0.96
ATG4B-209ENST00000425239 DOT1LQ8TEK3 1739 aa21.07■□□□□ 0.96
ATG4B-209ENST00000425239 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
ATG4B-209ENST00000425239 SLC16A10Q8TF71 515 aa21.06■□□□□ 0.96
ATG4B-209ENST00000425239 TMF1P82094 1093 aa21.04■□□□□ 0.96
ATG4B-209ENST00000425239 USP47Q96K76 1375 aa21.03■□□□□ 0.96
ATG4B-209ENST00000425239 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
ATG4B-209ENST00000425239 USHBP1Q8N6Y0 703 aa21.03■□□□□ 0.96
ATG4B-209ENST00000425239 ZNF784Q8NCA9 323 aaPredicted RBP21.03■□□□□ 0.96
ATG4B-209ENST00000425239 SYTL4Q96C24 671 aaPredicted RBP21.03■□□□□ 0.96
ATG4B-209ENST00000425239 CARD14Q9BXL6 1004 aa21.03■□□□□ 0.96
ATG4B-209ENST00000425239 CGNL1Q0VF96 1302 aa21.02■□□□□ 0.95
ATG4B-209ENST00000425239 INSRP06213 1382 aa21.01■□□□□ 0.95
ATG4B-209ENST00000425239 CHD4Q14839 1912 aa21.01■□□□□ 0.95
ATG4B-209ENST00000425239 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
ATG4B-209ENST00000425239 KIF24Q5T7B8 1368 aa20.98■□□□□ 0.95
ATG4B-209ENST00000425239 CCNL1Q9UK58 526 aaPredicted RBP20.97■□□□□ 0.95
ATG4B-209ENST00000425239 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
ATG4B-209ENST00000425239 CYP27B1O15528 508 aa20.96■□□□□ 0.95
ATG4B-209ENST00000425239 COL23A1Q86Y22 540 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-209ENST00000425239 FLT4P35916 1363 aa20.96■□□□□ 0.95
ATG4B-209ENST00000425239 NCAPD2Q15021 1401 aa20.95■□□□□ 0.95
ATG4B-209ENST00000425239 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
ATG4B-209ENST00000425239 RAPGEF4Q8WZA2 1011 aa20.95■□□□□ 0.94
ATG4B-209ENST00000425239 TATP17735 454 aaPredicted RBP20.94■□□□□ 0.94
ATG4B-209ENST00000425239 NLGN2Q8NFZ4 835 aa20.94■□□□□ 0.94
ATG4B-209ENST00000425239 EMILIN1Q9Y6C2 1016 aa20.94■□□□□ 0.94
ATG4B-209ENST00000425239 POLD1P28340 1107 aa20.93■□□□□ 0.94
ATG4B-209ENST00000425239 CDCA8Q53HL2 280 aa20.93■□□□□ 0.94
ATG4B-209ENST00000425239 SMG6Q86US8 1419 aaKnown RBP20.93■□□□□ 0.94
ATG4B-209ENST00000425239 PCDH11XQ9BZA7 1347 aa20.92■□□□□ 0.94
ATG4B-209ENST00000425239 PCDH11YQ9BZA8 1340 aa20.92■□□□□ 0.94
ATG4B-209ENST00000425239 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
ATG4B-209ENST00000425239 TAF1LQ8IZX4 1826 aa20.92■□□□□ 0.94
ATG4B-209ENST00000425239 ITGB4P16144 1822 aa20.9■□□□□ 0.94
ATG4B-209ENST00000425239 ANKRD26Q9UPS8 1709 aa20.9■□□□□ 0.94
ATG4B-209ENST00000425239 C5P01031 1676 aa20.9■□□□□ 0.94
ATG4B-209ENST00000425239 NKX1-1Q15270 411 aaPredicted RBP20.9■□□□□ 0.94
ATG4B-209ENST00000425239 GPR162Q16538 588 aa20.9■□□□□ 0.94
ATG4B-209ENST00000425239 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
ATG4B-209ENST00000425239 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.94
ATG4B-209ENST00000425239 AMIGO3Q86WK7 504 aa20.89■□□□□ 0.93
ATG4B-209ENST00000425239 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
ATG4B-209ENST00000425239 MPRIPQ6WCQ1 1025 aa20.88■□□□□ 0.93
ATG4B-209ENST00000425239 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
ATG4B-209ENST00000425239 PALLDQ8WX93 1383 aa20.87■□□□□ 0.93
ATG4B-209ENST00000425239 YBX3P16989 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
ATG4B-209ENST00000425239 MAP2P11137 1827 aaKnown RBP20.86■□□□□ 0.93
ATG4B-209ENST00000425239 KLHL34Q8N239 644 aa20.86■□□□□ 0.93
ATG4B-209ENST00000425239 PIGBQ92521 554 aa20.86■□□□□ 0.93
ATG4B-209ENST00000425239 EYA1Q99502 592 aa20.86■□□□□ 0.93
ATG4B-209ENST00000425239 POLKQ9UBT6 870 aa20.85■□□□□ 0.93
ATG4B-209ENST00000425239 MSL1Q68DK7 614 aa20.83■□□□□ 0.93
ATG4B-209ENST00000425239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.93
ATG4B-209ENST00000425239 C4BP0C0L5 1744 aa20.83■□□□□ 0.92
ATG4B-209ENST00000425239 MSH5O43196 834 aa20.82■□□□□ 0.92
ATG4B-209ENST00000425239 C1QTNF8P60827 252 aa20.82■□□□□ 0.92
ATG4B-209ENST00000425239 SMIM5Q71RC9 77 aa20.82■□□□□ 0.92
ATG4B-209ENST00000425239 FLAD1Q8NFF5 587 aa20.82■□□□□ 0.92
ATG4B-209ENST00000425239 UBR3Q6ZT12 1888 aa20.81■□□□□ 0.92
ATG4B-209ENST00000425239 SMARCC1Q92922 1105 aaPredicted RBP20.81■□□□□ 0.92
ATG4B-209ENST00000425239 CEP350Q5VT06 3117 aa20.81■□□□□ 0.92
ATG4B-209ENST00000425239 PPM1GO15355 546 aaPredicted RBP20.8■□□□□ 0.92
ATG4B-209ENST00000425239 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
ATG4B-209ENST00000425239 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
ATG4B-209ENST00000425239 PELP1Q8IZL8 1130 aaKnown RBP20.79■□□□□ 0.92
ATG4B-209ENST00000425239 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
ATG4B-209ENST00000425239 GRIN3BO60391 1043 aa20.78■□□□□ 0.92
ATG4B-209ENST00000425239 PHKG2P15735 406 aa20.78■□□□□ 0.92
ATG4B-209ENST00000425239 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
ATG4B-209ENST00000425239 LOC102724428A0A0B4J2F2 783 aa20.77■□□□□ 0.92
ATG4B-209ENST00000425239 SIK1P57059 783 aa20.77■□□□□ 0.92
ATG4B-209ENST00000425239 EIF4A2Q14240 407 aaKnown RBP20.77■□□□□ 0.92
ATG4B-209ENST00000425239 ASAP1Q9ULH1 1129 aa20.77■□□□□ 0.92
ATG4B-209ENST00000425239 ITPK1Q13572 414 aa20.76■□□□□ 0.91
ATG4B-209ENST00000425239 CLSPNQ9HAW4 1339 aa20.76■□□□□ 0.91
ATG4B-209ENST00000425239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
ATG4B-209ENST00000425239 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
ATG4B-209ENST00000425239 AK7Q96M32 723 aa20.74■□□□□ 0.91
ATG4B-209ENST00000425239 ATG3Q9NT62 314 aa20.74■□□□□ 0.91
ATG4B-209ENST00000425239 SSFA2P28290 1259 aa20.73■□□□□ 0.91
ATG4B-209ENST00000425239 SLC4A9Q96Q91 983 aa20.73■□□□□ 0.91
ATG4B-209ENST00000425239 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
ATG4B-209ENST00000425239 TMOD3Q9NYL9 352 aa20.72■□□□□ 0.91
ATG4B-209ENST00000425239 IGSF1Q8N6C5 1336 aa20.72■□□□□ 0.91
ATG4B-209ENST00000425239 PHF14O94880 888 aa20.71■□□□□ 0.91
ATG4B-209ENST00000425239 TNNT2P45379 298 aaPredicted RBP20.7■□□□□ 0.9
ATG4B-209ENST00000425239 KDRP35968 1356 aa20.7■□□□□ 0.9
ATG4B-209ENST00000425239 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
ATG4B-209ENST00000425239 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
ATG4B-209ENST00000425239 ATP6V1AP38606 617 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms