RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 FYB1O15117 783 aa16.38■□□□□ 0.21
TRBV22-1-201ENST00000424543 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
TRBV22-1-201ENST00000424543 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
TRBV22-1-201ENST00000424543 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
TRBV22-1-201ENST00000424543 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
TRBV22-1-201ENST00000424543 TOGARAM1Q9Y4F4 1720 aa16.38■□□□□ 0.21
TRBV22-1-201ENST00000424543 CHD4Q14839 1912 aa16.37■□□□□ 0.21
TRBV22-1-201ENST00000424543 TMF1P82094 1093 aa16.37■□□□□ 0.21
TRBV22-1-201ENST00000424543 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
TRBV22-1-201ENST00000424543 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
TRBV22-1-201ENST00000424543 ITGB4P16144 1822 aa16.36■□□□□ 0.21
TRBV22-1-201ENST00000424543 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
TRBV22-1-201ENST00000424543 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
TRBV22-1-201ENST00000424543 HSP90AB2PQ58FF8 381 aa16.35■□□□□ 0.21
TRBV22-1-201ENST00000424543 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
TRBV22-1-201ENST00000424543 SYT17Q9BSW7 474 aa16.35■□□□□ 0.21
TRBV22-1-201ENST00000424543 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
TRBV22-1-201ENST00000424543 C5P01031 1676 aa16.34■□□□□ 0.21
TRBV22-1-201ENST00000424543 TAF1LQ8IZX4 1826 aa16.34■□□□□ 0.21
TRBV22-1-201ENST00000424543 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
TRBV22-1-201ENST00000424543 PNPLA7Q6ZV29 1317 aa16.34■□□□□ 0.21
TRBV22-1-201ENST00000424543 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
TRBV22-1-201ENST00000424543 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
TRBV22-1-201ENST00000424543 ARXQ96QS3 562 aa16.33■□□□□ 0.2
TRBV22-1-201ENST00000424543 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
TRBV22-1-201ENST00000424543 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.2
TRBV22-1-201ENST00000424543 PKD1L3Q7Z443 1732 aa16.32■□□□□ 0.2
TRBV22-1-201ENST00000424543 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
TRBV22-1-201ENST00000424543 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
TRBV22-1-201ENST00000424543 FLT4P35916 1363 aa16.3■□□□□ 0.2
TRBV22-1-201ENST00000424543 SLC27A3Q5K4L6 730 aa16.3■□□□□ 0.2
TRBV22-1-201ENST00000424543 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
TRBV22-1-201ENST00000424543 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
TRBV22-1-201ENST00000424543 INSRP06213 1382 aa16.29■□□□□ 0.2
TRBV22-1-201ENST00000424543 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
TRBV22-1-201ENST00000424543 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
TRBV22-1-201ENST00000424543 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
TRBV22-1-201ENST00000424543 PPM1GO15355 546 aaPredicted RBP16.27■□□□□ 0.2
TRBV22-1-201ENST00000424543 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
TRBV22-1-201ENST00000424543 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
TRBV22-1-201ENST00000424543 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
TRBV22-1-201ENST00000424543 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
TRBV22-1-201ENST00000424543 CYP27B1O15528 508 aa16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 MSH5O43196 834 aa16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 SMIM5Q71RC9 77 aa16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 COL23A1Q86Y22 540 aaPredicted RBP16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 ZNF784Q8NCA9 323 aaPredicted RBP16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
TRBV22-1-201ENST00000424543 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
TRBV22-1-201ENST00000424543 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
TRBV22-1-201ENST00000424543 CDCA8Q53HL2 280 aa16.24■□□□□ 0.19
TRBV22-1-201ENST00000424543 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
TRBV22-1-201ENST00000424543 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
TRBV22-1-201ENST00000424543 POLD1P28340 1107 aa16.23■□□□□ 0.19
TRBV22-1-201ENST00000424543 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
TRBV22-1-201ENST00000424543 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
TRBV22-1-201ENST00000424543 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
TRBV22-1-201ENST00000424543 GPR162Q16538 588 aa16.22■□□□□ 0.19
TRBV22-1-201ENST00000424543 AMIGO3Q86WK7 504 aa16.22■□□□□ 0.19
TRBV22-1-201ENST00000424543 SLC16A10Q8TF71 515 aa16.21■□□□□ 0.19
TRBV22-1-201ENST00000424543 KIF24Q5T7B8 1368 aa16.21■□□□□ 0.19
TRBV22-1-201ENST00000424543 EYA1Q99502 592 aa16.2■□□□□ 0.18
TRBV22-1-201ENST00000424543 PIGBQ92521 554 aa16.18■□□□□ 0.18
TRBV22-1-201ENST00000424543 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
TRBV22-1-201ENST00000424543 PHF14O94880 888 aa16.17■□□□□ 0.18
TRBV22-1-201ENST00000424543 YBX3P16989 372 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRBV22-1-201ENST00000424543 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
TRBV22-1-201ENST00000424543 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
TRBV22-1-201ENST00000424543 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
TRBV22-1-201ENST00000424543 WWC3Q9ULE0 1092 aa16.15■□□□□ 0.18
TRBV22-1-201ENST00000424543 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
TRBV22-1-201ENST00000424543 AK7Q96M32 723 aa16.14■□□□□ 0.17
TRBV22-1-201ENST00000424543 ASAP1Q9ULH1 1129 aa16.13■□□□□ 0.17
TRBV22-1-201ENST00000424543 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
TRBV22-1-201ENST00000424543 PHKG2P15735 406 aa16.12■□□□□ 0.17
TRBV22-1-201ENST00000424543 ITPK1Q13572 414 aa16.12■□□□□ 0.17
TRBV22-1-201ENST00000424543 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
TRBV22-1-201ENST00000424543 PANK3Q9H999 370 aa16.12■□□□□ 0.17
TRBV22-1-201ENST00000424543 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 VIRMAQ69YN4 1812 aaKnown RBP16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 SIK1P57059 783 aa16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
TRBV22-1-201ENST00000424543 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
TRBV22-1-201ENST00000424543 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
TRBV22-1-201ENST00000424543 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRBV22-1-201ENST00000424543 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
TRBV22-1-201ENST00000424543 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
TRBV22-1-201ENST00000424543 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
TRBV22-1-201ENST00000424543 GNPATO15228 680 aa16.08■□□□□ 0.16
TRBV22-1-201ENST00000424543 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
TRBV22-1-201ENST00000424543 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.16
TRBV22-1-201ENST00000424543 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
TRBV22-1-201ENST00000424543 KDM6AO15550 1401 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms