RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 FAM196AQ6ZSG2 479 aa34.05■■■■□ 3.04
TSPAN3-203ENST00000424443 DDX54Q8TDD1 881 aaKnown RBP34.04■■■■□ 3.04
TSPAN3-203ENST00000424443 RGPD1P0DJD0 1748 aa34.03■■■■□ 3.04
TSPAN3-203ENST00000424443 MARCH10Q8NA82 808 aaPredicted RBP34.03■■■■□ 3.04
TSPAN3-203ENST00000424443 AEBP1Q8IUX7 1158 aa34.01■■■■□ 3.04
TSPAN3-203ENST00000424443 HMOX1P09601 288 aa34■■■■□ 3.03
TSPAN3-203ENST00000424443 SPG7Q9UQ90 795 aa34■■■■□ 3.03
TSPAN3-203ENST00000424443 KDRP35968 1356 aa33.99■■■■□ 3.03
TSPAN3-203ENST00000424443 UPF1Q92900 1129 aaKnown RBP eCLIP33.98■■■■□ 3.031e-6■■■□□ 17.8
TSPAN3-203ENST00000424443 PCDH11XQ9BZA7 1347 aa33.97■■■■□ 3.03
TSPAN3-203ENST00000424443 PCDH11YQ9BZA8 1340 aa33.97■■■■□ 3.03
TSPAN3-203ENST00000424443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.96■■■■□ 3.03
TSPAN3-203ENST00000424443 PLEKHG2Q9H7P9 1386 aa33.96■■■■□ 3.03
TSPAN3-203ENST00000424443 U2AF1L5P0DN76 240 aaPredicted RBP33.95■■■■□ 3.03
TSPAN3-203ENST00000424443 U2AF1Q01081 240 aaKnown RBP eCLIP33.95■■■■□ 3.03
TSPAN3-203ENST00000424443 EP400Q96L91 3159 aa33.95■■■■□ 3.03
TSPAN3-203ENST00000424443 SF3B2Q13435 895 aaKnown RBP33.94■■■■□ 3.02
TSPAN3-203ENST00000424443 PLEKHO1Q53GL0 409 aaPredicted RBP33.94■■■■□ 3.02
TSPAN3-203ENST00000424443 CCDC125Q86Z20 511 aa33.94■■■■□ 3.02
TSPAN3-203ENST00000424443 AMOTQ4VCS5 1084 aa33.93■■■■□ 3.02
TSPAN3-203ENST00000424443 PKD1L3Q7Z443 1732 aa33.92■■■■□ 3.02
TSPAN3-203ENST00000424443 SHANK3Q9BYB0 1731 aa33.91■■■■□ 3.02
TSPAN3-203ENST00000424443 TRIM37O94972 964 aa33.9■■■■□ 3.02
TSPAN3-203ENST00000424443 BCL9O00512 1426 aa33.89■■■■□ 3.02
TSPAN3-203ENST00000424443 CYP27B1O15528 508 aa33.87■■■■□ 3.01
TSPAN3-203ENST00000424443 IFNL2Q8IZJ0 200 aa33.87■■■■□ 3.01
TSPAN3-203ENST00000424443 ACSBG1Q96GR2 724 aa33.85■■■■□ 3.01
TSPAN3-203ENST00000424443 FCHSD2O94868 740 aa33.84■■■■□ 3.01
TSPAN3-203ENST00000424443 ZNF530Q6P9A1 599 aaPredicted RBP33.84■■■■□ 3.01
TSPAN3-203ENST00000424443 C1orf141Q5JVX7 400 aa33.84■■■■□ 3.01
TSPAN3-203ENST00000424443 PRKAR2BP31323 418 aa33.83■■■■□ 3.01
TSPAN3-203ENST00000424443 RSPH6AQ9H0K4 717 aa33.83■■■■□ 3.01
TSPAN3-203ENST00000424443 KAT6BQ8WYB5 2073 aa33.82■■■■□ 3.01
TSPAN3-203ENST00000424443 PHKG2P15735 406 aa33.82■■■■□ 3
TSPAN3-203ENST00000424443 WDR43Q15061 677 aaKnown RBP eCLIP33.82■■■■□ 3
TSPAN3-203ENST00000424443 SBF2Q86WG5 1849 aa33.81■■■■□ 3
TSPAN3-203ENST00000424443 NEFMP07197 916 aa33.81■■■■□ 3
TSPAN3-203ENST00000424443 SYTL4Q96C24 671 aaPredicted RBP33.8■■■■□ 3
TSPAN3-203ENST00000424443 BCL11BQ9C0K0 894 aaPredicted RBP33.8■■■■□ 3
TSPAN3-203ENST00000424443 PNNQ9H307 717 aaKnown RBP33.8■■■■□ 3
TSPAN3-203ENST00000424443 HSP90AB1P08238 724 aaKnown RBP33.79■■■■□ 3
TSPAN3-203ENST00000424443 BAG6P46379 1132 aa33.79■■■■□ 3
TSPAN3-203ENST00000424443 APBA3O96018 575 aa33.78■■■■□ 3
TSPAN3-203ENST00000424443 NKX1-1Q15270 411 aaPredicted RBP33.77■■■■□ 3
TSPAN3-203ENST00000424443 KCNQ2O43526 872 aa33.76■■■■□ 3
TSPAN3-203ENST00000424443 MTHFSDQ2M296 383 aaKnown RBP33.75■■■□□ 2.99
TSPAN3-203ENST00000424443 GAS2L2Q8NHY3 880 aa33.75■■■□□ 2.99
TSPAN3-203ENST00000424443 NHSQ6T4R5 1651 aa33.75■■■□□ 2.99
TSPAN3-203ENST00000424443 DOT1LQ8TEK3 1739 aa33.75■■■□□ 2.99
TSPAN3-203ENST00000424443 TNS1Q9HBL0 1735 aaKnown RBP33.75■■■□□ 2.99
TSPAN3-203ENST00000424443 PRIM1P49642 420 aaKnown RBP33.74■■■□□ 2.99
TSPAN3-203ENST00000424443 AKAP4Q5JQC9 854 aa33.74■■■□□ 2.99
TSPAN3-203ENST00000424443 MRS2Q9HD23 443 aa33.73■■■□□ 2.99
TSPAN3-203ENST00000424443 DIEXFQ68CQ4 756 aaKnown RBP33.72■■■□□ 2.99
TSPAN3-203ENST00000424443 DCAF5Q96JK2 942 aa33.72■■■□□ 2.99
TSPAN3-203ENST00000424443 PHACTR3Q96KR7 559 aa33.72■■■□□ 2.99
TSPAN3-203ENST00000424443 PTF1AQ7RTS3 328 aa33.71■■■□□ 2.99
TSPAN3-203ENST00000424443 DEFB132Q7Z7B7 95 aa33.71■■■□□ 2.99
TSPAN3-203ENST00000424443 MAPK8IP3Q9UPT6 1336 aa33.7■■■□□ 2.99
TSPAN3-203ENST00000424443 CCDC184Q52MB2 194 aa33.69■■■□□ 2.98
TSPAN3-203ENST00000424443 MPRIPQ6WCQ1 1025 aa33.69■■■□□ 2.98
TSPAN3-203ENST00000424443 EN1Q05925 392 aaPredicted RBP33.68■■■□□ 2.98
TSPAN3-203ENST00000424443 ADAMTS8Q9UP79 889 aa33.66■■■□□ 2.98
TSPAN3-203ENST00000424443 GNAT3A8MTJ3 354 aa33.64■■■□□ 2.98
TSPAN3-203ENST00000424443 PLEKHF1Q96S99 279 aa33.64■■■□□ 2.98
TSPAN3-203ENST00000424443 TMOD3Q9NYL9 352 aa33.64■■■□□ 2.98
TSPAN3-203ENST00000424443 TOGARAM1Q9Y4F4 1720 aa33.64■■■□□ 2.98
TSPAN3-203ENST00000424443 ERVV-2B6SEH9 535 aa33.63■■■□□ 2.97
TSPAN3-203ENST00000424443 BTAF1O14981 1849 aa33.63■■■□□ 2.97
TSPAN3-203ENST00000424443 MAP3K5Q99683 1374 aa33.63■■■□□ 2.97
TSPAN3-203ENST00000424443 PLSCR1O15162 318 aa33.63■■■□□ 2.97
TSPAN3-203ENST00000424443 CABP4P57796 275 aa33.62■■■□□ 2.97
TSPAN3-203ENST00000424443 KDM6AO15550 1401 aaPredicted RBP33.62■■■□□ 2.97
TSPAN3-203ENST00000424443 ITGB4P16144 1822 aa33.6■■■□□ 2.97
TSPAN3-203ENST00000424443 EZH2Q15910 746 aaKnown RBP33.6■■■□□ 2.97
TSPAN3-203ENST00000424443 CCDC146Q8IYE0 955 aa33.59■■■□□ 2.97
TSPAN3-203ENST00000424443 RTF1Q92541 710 aaKnown RBP33.59■■■□□ 2.97
TSPAN3-203ENST00000424443 RNMTO43148 476 aaKnown RBP33.58■■■□□ 2.97
TSPAN3-203ENST00000424443 RUNDC1Q96C34 613 aa33.58■■■□□ 2.97
TSPAN3-203ENST00000424443 CAMKK2Q96RR4 588 aa33.58■■■□□ 2.97
TSPAN3-203ENST00000424443 PIGBQ92521 554 aa33.58■■■□□ 2.97
TSPAN3-203ENST00000424443 LGR6Q9HBX8 967 aa33.58■■■□□ 2.97
TSPAN3-203ENST00000424443 SCN11AQ9UI33 1791 aa33.57■■■□□ 2.96
TSPAN3-203ENST00000424443 NFE2L2Q16236 605 aa33.56■■■□□ 2.96
TSPAN3-203ENST00000424443 PNISRQ8TF01 805 aaKnown RBP33.56■■■□□ 2.96
TSPAN3-203ENST00000424443 RGPD3A6NKT7 1758 aaPredicted RBP33.54■■■□□ 2.96
TSPAN3-203ENST00000424443 RGPD4Q7Z3J3 1758 aa33.54■■■□□ 2.96
TSPAN3-203ENST00000424443 NFATC2IPQ8NCF5 419 aa33.53■■■□□ 2.96
TSPAN3-203ENST00000424443 SMARCC1Q92922 1105 aaPredicted RBP33.53■■■□□ 2.96
TSPAN3-203ENST00000424443 VIRMAQ69YN4 1812 aaKnown RBP33.52■■■□□ 2.96
TSPAN3-203ENST00000424443 HTATSF1O43719 755 aaKnown RBP33.52■■■□□ 2.96
TSPAN3-203ENST00000424443 TEFQ10587 303 aa33.52■■■□□ 2.96
TSPAN3-203ENST00000424443 SLC52A2Q9HAB3 445 aa33.52■■■□□ 2.96
TSPAN3-203ENST00000424443 TXNRD1Q16881 649 aa33.51■■■□□ 2.95
TSPAN3-203ENST00000424443 IL17REQ8NFR9 667 aa33.5■■■□□ 2.95
TSPAN3-203ENST00000424443 RIPK4P57078 832 aa33.48■■■□□ 2.95
TSPAN3-203ENST00000424443 PALLDQ8WX93 1383 aa33.48■■■□□ 2.95
TSPAN3-203ENST00000424443 ADAMTS7Q9UKP4 1686 aa33.48■■■□□ 2.95
TSPAN3-203ENST00000424443 TMPOP42166 694 aaKnown RBP33.48■■■□□ 2.95
TSPAN3-203ENST00000424443 MCM10Q7L590 875 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 317.7 ms