RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
RPUSD3-204ENST00000424438 NSD2O96028 1365 aa22.09■■□□□ 1.13
RPUSD3-204ENST00000424438 GOLGB1Q14789 3259 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-204ENST00000424438 SLC24A1O60721 1099 aa22.08■■□□□ 1.13
RPUSD3-204ENST00000424438 GPBP1L1Q9HC44 474 aaPredicted RBP22.08■■□□□ 1.13
RPUSD3-204ENST00000424438 HSPA6P17066 643 aa22.07■■□□□ 1.12
RPUSD3-204ENST00000424438 NLGN2Q8NFZ4 835 aa22.07■■□□□ 1.12
RPUSD3-204ENST00000424438 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
RPUSD3-204ENST00000424438 RTL1A6NKG5 1358 aa22.07■■□□□ 1.12
RPUSD3-204ENST00000424438 CGNL1Q0VF96 1302 aa22.06■■□□□ 1.12
RPUSD3-204ENST00000424438 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
RPUSD3-204ENST00000424438 ATP10DQ9P241 1426 aa22.06■■□□□ 1.12
RPUSD3-204ENST00000424438 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
RPUSD3-204ENST00000424438 PRIM1P49642 420 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-204ENST00000424438 ZCRB1Q8TBF4 217 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-204ENST00000424438 MAP3K19Q56UN5 1328 aa22.04■■□□□ 1.12
RPUSD3-204ENST00000424438 RGPD2P0DJD1 1756 aa22.03■■□□□ 1.12
RPUSD3-204ENST00000424438 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.127e-7■■□□□ 12.7
RPUSD3-204ENST00000424438 HOXC9P31274 260 aa22.03■■□□□ 1.12
RPUSD3-204ENST00000424438 MEGF6O75095 1541 aa22.02■■□□□ 1.12
RPUSD3-204ENST00000424438 COG3Q96JB2 828 aa22.02■■□□□ 1.12
RPUSD3-204ENST00000424438 CCNL1Q9UK58 526 aaPredicted RBP22■■□□□ 1.11
RPUSD3-204ENST00000424438 USP47Q96K76 1375 aa21.99■■□□□ 1.11
RPUSD3-204ENST00000424438 C5P01031 1676 aa21.99■■□□□ 1.11
RPUSD3-204ENST00000424438 SYTL4Q96C24 671 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-204ENST00000424438 TESK2Q96S53 571 aa21.99■■□□□ 1.11
RPUSD3-204ENST00000424438 TAF1LQ8IZX4 1826 aa21.99■■□□□ 1.11
RPUSD3-204ENST00000424438 AMPHP49418 695 aa21.98■■□□□ 1.11
RPUSD3-204ENST00000424438 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-204ENST00000424438 MSH5O43196 834 aa21.97■■□□□ 1.11
RPUSD3-204ENST00000424438 FLAD1Q8NFF5 587 aa21.97■■□□□ 1.11
RPUSD3-204ENST00000424438 ZNF526Q8TF50 670 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-204ENST00000424438 KIF24Q5T7B8 1368 aa21.97■■□□□ 1.11
RPUSD3-204ENST00000424438 COL23A1Q86Y22 540 aaPredicted RBP21.96■■□□□ 1.11
RPUSD3-204ENST00000424438 CD2APQ9Y5K6 639 aa21.96■■□□□ 1.11
RPUSD3-204ENST00000424438 KCNQ4P56696 695 aa21.94■■□□□ 1.1
RPUSD3-204ENST00000424438 SMG6Q86US8 1419 aaKnown RBP21.94■■□□□ 1.1
RPUSD3-204ENST00000424438 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
RPUSD3-204ENST00000424438 RAPGEF4Q8WZA2 1011 aa21.92■■□□□ 1.1
RPUSD3-204ENST00000424438 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
RPUSD3-204ENST00000424438 INSRP06213 1382 aa21.91■■□□□ 1.1
RPUSD3-204ENST00000424438 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
RPUSD3-204ENST00000424438 PCDH11XQ9BZA7 1347 aa21.91■■□□□ 1.1
RPUSD3-204ENST00000424438 PCDH11YQ9BZA8 1340 aa21.91■■□□□ 1.1
RPUSD3-204ENST00000424438 ADCY9O60503 1353 aa21.9■■□□□ 1.1
RPUSD3-204ENST00000424438 NSD3Q9BZ95 1437 aa21.89■■□□□ 1.1
RPUSD3-204ENST00000424438 PKD1L3Q7Z443 1732 aa21.89■■□□□ 1.1
RPUSD3-204ENST00000424438 UBR3Q6ZT12 1888 aa21.88■■□□□ 1.09
RPUSD3-204ENST00000424438 ITGB4P16144 1822 aa21.88■■□□□ 1.09
RPUSD3-204ENST00000424438 ST20-MTHFSA0A0A6YYL1 179 aa21.88■■□□□ 1.09
RPUSD3-204ENST00000424438 FYB1O15117 783 aa21.88■■□□□ 1.09
RPUSD3-204ENST00000424438 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
RPUSD3-204ENST00000424438 C4BP0C0L5 1744 aa21.88■■□□□ 1.09
RPUSD3-204ENST00000424438 NCAPD2Q15021 1401 aa21.88■■□□□ 1.09
RPUSD3-204ENST00000424438 FLT4P35916 1363 aa21.87■■□□□ 1.09
RPUSD3-204ENST00000424438 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
RPUSD3-204ENST00000424438 APLP1P51693 650 aa21.87■■□□□ 1.09
RPUSD3-204ENST00000424438 SMARCC1Q92922 1105 aaPredicted RBP21.87■■□□□ 1.09
RPUSD3-204ENST00000424438 KIF20BQ96Q89 1820 aa21.86■■□□□ 1.09
RPUSD3-204ENST00000424438 FBLN1P23142 703 aa21.86■■□□□ 1.09
RPUSD3-204ENST00000424438 MSL1Q68DK7 614 aa21.86■■□□□ 1.09
RPUSD3-204ENST00000424438 TOGARAM1Q9Y4F4 1720 aa21.86■■□□□ 1.09
RPUSD3-204ENST00000424438 RRS1Q15050 365 aaKnown RBP21.85■■□□□ 1.09
RPUSD3-204ENST00000424438 MAP2P11137 1827 aaKnown RBP21.85■■□□□ 1.09
RPUSD3-204ENST00000424438 CYP27B1O15528 508 aa21.82■■□□□ 1.08
RPUSD3-204ENST00000424438 NKX1-1Q15270 411 aaPredicted RBP21.82■■□□□ 1.08
RPUSD3-204ENST00000424438 ANKRD26Q9UPS8 1709 aa21.82■■□□□ 1.08
RPUSD3-204ENST00000424438 CICQ96RK0 1608 aaPredicted RBP21.81■■□□□ 1.08
RPUSD3-204ENST00000424438 USHBP1Q8N6Y0 703 aa21.81■■□□□ 1.08
RPUSD3-204ENST00000424438 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
RPUSD3-204ENST00000424438 KIF3CO14782 793 aa21.8■■□□□ 1.08
RPUSD3-204ENST00000424438 SSFA2P28290 1259 aa21.8■■□□□ 1.08
RPUSD3-204ENST00000424438 HSP90AB2PQ58FF8 381 aa21.8■■□□□ 1.08
RPUSD3-204ENST00000424438 GGNBP2Q9H3C7 697 aa21.8■■□□□ 1.08
RPUSD3-204ENST00000424438 TMF1P82094 1093 aa21.79■■□□□ 1.08
RPUSD3-204ENST00000424438 AK7Q96M32 723 aa21.79■■□□□ 1.08
RPUSD3-204ENST00000424438 CDCA8Q53HL2 280 aa21.78■■□□□ 1.08
RPUSD3-204ENST00000424438 MPRIPQ6WCQ1 1025 aa21.78■■□□□ 1.08
RPUSD3-204ENST00000424438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.78■■□□□ 1.08
RPUSD3-204ENST00000424438 KIF13BQ9NQT8 1826 aa21.76■■□□□ 1.07
RPUSD3-204ENST00000424438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.75■■□□□ 1.07
RPUSD3-204ENST00000424438 CAPN15O75808 1086 aa21.75■■□□□ 1.07
RPUSD3-204ENST00000424438 PIGBQ92521 554 aa21.75■■□□□ 1.07
RPUSD3-204ENST00000424438 WWC3Q9ULE0 1092 aa21.75■■□□□ 1.07
RPUSD3-204ENST00000424438 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
RPUSD3-204ENST00000424438 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
RPUSD3-204ENST00000424438 TOMM70O94826 608 aa21.74■■□□□ 1.07
RPUSD3-204ENST00000424438 LOC102724428A0A0B4J2F2 783 aa21.73■■□□□ 1.07
RPUSD3-204ENST00000424438 SIK1P57059 783 aa21.73■■□□□ 1.07
RPUSD3-204ENST00000424438 AMIGO3Q86WK7 504 aa21.73■■□□□ 1.07
RPUSD3-204ENST00000424438 DNAJC5GQ8N7S2 189 aa21.73■■□□□ 1.07
RPUSD3-204ENST00000424438 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
RPUSD3-204ENST00000424438 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
RPUSD3-204ENST00000424438 KIAA1551Q9HCM1 1747 aa21.69■■□□□ 1.06
RPUSD3-204ENST00000424438 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
RPUSD3-204ENST00000424438 COL13A1Q5TAT6 717 aaPredicted RBP21.68■■□□□ 1.06
RPUSD3-204ENST00000424438 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
RPUSD3-204ENST00000424438 EMILIN1Q9Y6C2 1016 aa21.68■■□□□ 1.06
RPUSD3-204ENST00000424438 TNS4Q8IZW8 715 aa21.67■■□□□ 1.06
RPUSD3-204ENST00000424438 PHF14O94880 888 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms