RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
PLOD3-204ENST00000424135 AMPHP49418 695 aa16.55■□□□□ 0.24
PLOD3-204ENST00000424135 NBPF6Q5VWK0 638 aa16.55■□□□□ 0.24
PLOD3-204ENST00000424135 NBPF4Q96M43 638 aa16.55■□□□□ 0.24
PLOD3-204ENST00000424135 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
PLOD3-204ENST00000424135 DOT1LQ8TEK3 1739 aa16.54■□□□□ 0.24
PLOD3-204ENST00000424135 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
PLOD3-204ENST00000424135 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
PLOD3-204ENST00000424135 NLGN2Q8NFZ4 835 aa16.54■□□□□ 0.24
PLOD3-204ENST00000424135 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
PLOD3-204ENST00000424135 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
PLOD3-204ENST00000424135 FYB1O15117 783 aa16.53■□□□□ 0.24
PLOD3-204ENST00000424135 TFCP2L1Q9NZI6 479 aa16.53■□□□□ 0.24
PLOD3-204ENST00000424135 GPR162Q16538 588 aa16.51■□□□□ 0.23
PLOD3-204ENST00000424135 LY75O60449 1722 aa16.5■□□□□ 0.23
PLOD3-204ENST00000424135 HSP90AB2PQ58FF8 381 aa16.5■□□□□ 0.23
PLOD3-204ENST00000424135 COL23A1Q86Y22 540 aaPredicted RBP16.5■□□□□ 0.23
PLOD3-204ENST00000424135 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
PLOD3-204ENST00000424135 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
PLOD3-204ENST00000424135 COL24A1Q17RW2 1714 aa16.5■□□□□ 0.23
PLOD3-204ENST00000424135 QSER1Q2KHR3 1735 aa16.5■□□□□ 0.23
PLOD3-204ENST00000424135 POLD1P28340 1107 aa16.48■□□□□ 0.23
PLOD3-204ENST00000424135 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
PLOD3-204ENST00000424135 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
PLOD3-204ENST00000424135 CHD4Q14839 1912 aa16.47■□□□□ 0.23
PLOD3-204ENST00000424135 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
PLOD3-204ENST00000424135 YBX3P16989 372 aaKnown RBP eCLIP16.46■□□□□ 0.238e-7■■□□□ 12.2
PLOD3-204ENST00000424135 SMIM5Q71RC9 77 aa16.46■□□□□ 0.23
PLOD3-204ENST00000424135 AMIGO3Q86WK7 504 aa16.46■□□□□ 0.23
PLOD3-204ENST00000424135 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
PLOD3-204ENST00000424135 USP47Q96K76 1375 aa16.46■□□□□ 0.23
PLOD3-204ENST00000424135 CYP27B1O15528 508 aa16.45■□□□□ 0.22
PLOD3-204ENST00000424135 MSH5O43196 834 aa16.45■□□□□ 0.22
PLOD3-204ENST00000424135 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
PLOD3-204ENST00000424135 C1QTNF8P60827 252 aa16.44■□□□□ 0.22
PLOD3-204ENST00000424135 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
PLOD3-204ENST00000424135 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
PLOD3-204ENST00000424135 INSRP06213 1382 aa16.43■□□□□ 0.22
PLOD3-204ENST00000424135 TATP17735 454 aaPredicted RBP16.43■□□□□ 0.22
PLOD3-204ENST00000424135 TMF1P82094 1093 aa16.43■□□□□ 0.22
PLOD3-204ENST00000424135 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
PLOD3-204ENST00000424135 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
PLOD3-204ENST00000424135 CGNL1Q0VF96 1302 aa16.42■□□□□ 0.22
PLOD3-204ENST00000424135 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
PLOD3-204ENST00000424135 FLT4P35916 1363 aa16.4■□□□□ 0.22
PLOD3-204ENST00000424135 PALLDQ8WX93 1383 aa16.4■□□□□ 0.22
PLOD3-204ENST00000424135 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
PLOD3-204ENST00000424135 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
PLOD3-204ENST00000424135 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
PLOD3-204ENST00000424135 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
PLOD3-204ENST00000424135 C5P01031 1676 aa16.39■□□□□ 0.21
PLOD3-204ENST00000424135 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
PLOD3-204ENST00000424135 NSD3Q9BZ95 1437 aa16.38■□□□□ 0.21
PLOD3-204ENST00000424135 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
PLOD3-204ENST00000424135 PIGBQ92521 554 aa16.38■□□□□ 0.21
PLOD3-204ENST00000424135 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
PLOD3-204ENST00000424135 WWC3Q9ULE0 1092 aa16.36■□□□□ 0.21
PLOD3-204ENST00000424135 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
PLOD3-204ENST00000424135 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
PLOD3-204ENST00000424135 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
PLOD3-204ENST00000424135 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
PLOD3-204ENST00000424135 C4BP0C0L5 1744 aa16.34■□□□□ 0.21
PLOD3-204ENST00000424135 ITGB4P16144 1822 aa16.34■□□□□ 0.21
PLOD3-204ENST00000424135 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
PLOD3-204ENST00000424135 PHF14O94880 888 aa16.34■□□□□ 0.21
PLOD3-204ENST00000424135 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
PLOD3-204ENST00000424135 EYA1Q99502 592 aa16.34■□□□□ 0.21
PLOD3-204ENST00000424135 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.21
PLOD3-204ENST00000424135 ITPK1Q13572 414 aa16.33■□□□□ 0.2
PLOD3-204ENST00000424135 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
PLOD3-204ENST00000424135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.32■□□□□ 0.2
PLOD3-204ENST00000424135 GRIN3BO60391 1043 aa16.32■□□□□ 0.2
PLOD3-204ENST00000424135 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
PLOD3-204ENST00000424135 AK7Q96M32 723 aa16.32■□□□□ 0.2
PLOD3-204ENST00000424135 CD2APQ9Y5K6 639 aa16.32■□□□□ 0.2
PLOD3-204ENST00000424135 ATP10DQ9P241 1426 aa16.31■□□□□ 0.2
PLOD3-204ENST00000424135 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
PLOD3-204ENST00000424135 LOC102724428A0A0B4J2F2 783 aa16.31■□□□□ 0.2
PLOD3-204ENST00000424135 SIK1P57059 783 aa16.31■□□□□ 0.2
PLOD3-204ENST00000424135 CDCA8Q53HL2 280 aa16.31■□□□□ 0.2
PLOD3-204ENST00000424135 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
PLOD3-204ENST00000424135 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
PLOD3-204ENST00000424135 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
PLOD3-204ENST00000424135 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
PLOD3-204ENST00000424135 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
PLOD3-204ENST00000424135 PHKG2P15735 406 aa16.29■□□□□ 0.2
PLOD3-204ENST00000424135 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
PLOD3-204ENST00000424135 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
PLOD3-204ENST00000424135 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
PLOD3-204ENST00000424135 SLC4A9Q96Q91 983 aa16.28■□□□□ 0.2
PLOD3-204ENST00000424135 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
PLOD3-204ENST00000424135 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
PLOD3-204ENST00000424135 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
PLOD3-204ENST00000424135 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
PLOD3-204ENST00000424135 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
PLOD3-204ENST00000424135 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
PLOD3-204ENST00000424135 ADCY9O60503 1353 aa16.26■□□□□ 0.19
PLOD3-204ENST00000424135 GNPATO15228 680 aa16.26■□□□□ 0.19
PLOD3-204ENST00000424135 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
PLOD3-204ENST00000424135 SSFA2P28290 1259 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms