RNA–Protein interactions for RNA: ENST00000424088.1

C4BPA-203, Transcript of complement component 4 binding protein alpha, humanhuman

TSL 4

Gene C4BPA, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPA-203ENST00000424088 ERVK-9P63128 1117 aa3.9□□□□□ -1.79
C4BPA-203ENST00000424088 KDF1Q8NAX2 398 aaPredicted RBP3.9□□□□□ -1.79
C4BPA-203ENST00000424088 RNF217Q8TC41 542 aa3.9□□□□□ -1.79
C4BPA-203ENST00000424088 NLRP3Q96P20 1036 aa3.9□□□□□ -1.79
C4BPA-203ENST00000424088 PCDHB11Q9Y5F2 797 aa3.9□□□□□ -1.79
C4BPA-203ENST00000424088 MYCP01106 439 aaPredicted RBP3.89□□□□□ -1.79
C4BPA-203ENST00000424088 GPC1P35052 558 aa3.89□□□□□ -1.79
C4BPA-203ENST00000424088 SV2AQ7L0J3 742 aa3.89□□□□□ -1.79
C4BPA-203ENST00000424088 PRICKLE2Q7Z3G6 844 aa3.89□□□□□ -1.79
C4BPA-203ENST00000424088 CYP2U1Q7Z449 544 aa3.89□□□□□ -1.79
C4BPA-203ENST00000424088 VWA5B2Q8N398 1253 aa3.89□□□□□ -1.79
C4BPA-203ENST00000424088 NANOS1Q8WY41 292 aaKnown RBP3.89□□□□□ -1.79
C4BPA-203ENST00000424088 TBC1D2BQ9UPU7 963 aa3.89□□□□□ -1.79
C4BPA-203ENST00000424088 ITGA6P23229 1130 aa3.88□□□□□ -1.79
C4BPA-203ENST00000424088 USP4Q13107 963 aa3.88□□□□□ -1.79
C4BPA-203ENST00000424088 WASHC4Q2M389 1173 aa3.88□□□□□ -1.79
C4BPA-203ENST00000424088 SLFNL1Q499Z3 407 aa3.88□□□□□ -1.79
C4BPA-203ENST00000424088 SLC27A3Q5K4L6 730 aa3.88□□□□□ -1.79
C4BPA-203ENST00000424088 FOXD4L5Q5VV16 416 aaPredicted RBP3.88□□□□□ -1.79
C4BPA-203ENST00000424088 GPR161Q8N6U8 529 aaKnown RBP3.88□□□□□ -1.79
C4BPA-203ENST00000424088 GDPD2Q9HCC8 539 aa3.88□□□□□ -1.79
C4BPA-203ENST00000424088 CDC14CA4D256 554 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 GPR37L1O60883 481 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 GNRH1P01148 92 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 ABL2P42684 1182 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 SCTRP47872 440 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 FOXR1Q6PIV2 292 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 CNTNAP3BQ96NU0 1288 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 COL25A1Q9BXS0 654 aaPredicted RBP3.87□□□□□ -1.79
C4BPA-203ENST00000424088 CNTNAP3Q9BZ76 1288 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 OSBPL3Q9H4L5 887 aa3.87□□□□□ -1.79
C4BPA-203ENST00000424088 SENP3-EIF4A1A0A087X0R7 540 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 TRAK2O60296 914 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 RHOQP17081 205 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 LORP23490 312 aaPredicted RBP3.86□□□□□ -1.79
C4BPA-203ENST00000424088 GTF2E1P29083 439 aaPredicted RBP3.86□□□□□ -1.79
C4BPA-203ENST00000424088 VAC14Q08AM6 782 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 POU4F2Q12837 409 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 SEMA3FQ13275 785 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 CLN3Q13286 438 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 IRF5Q13568 498 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 TSGA10IPQ3SY00 556 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 SIRT1Q96EB6 747 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 GMCL1Q96IK5 515 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 CCDC85AQ96PX6 553 aaPredicted RBP3.86□□□□□ -1.79
C4BPA-203ENST00000424088 CDCA7Q9BWT1 371 aaPredicted RBP3.86□□□□□ -1.79
C4BPA-203ENST00000424088 GRIP2Q9C0E4 1043 aa3.86□□□□□ -1.79
C4BPA-203ENST00000424088 H7C1W4 665 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 CENPCQ03188 943 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 ESCO1Q5FWF5 840 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 WDR44Q5JSH3 913 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 RIPOR1Q6ZS17 1223 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 RNF135Q8IUD6 432 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 WWC1Q8IX03 1113 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 PHTF2Q8N3S3 785 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 CNKSR1Q969H4 720 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 ESYT1Q9BSJ8 1104 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 ARHGEF10LQ9HCE6 1279 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 DOLKQ9UPQ8 538 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 DYRK1BQ9Y463 629 aa3.85□□□□□ -1.79
C4BPA-203ENST00000424088 SOX11P35716 441 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 KRT76Q01546 638 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 DBN1Q16643 649 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 MAP7D1Q3KQU3 841 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 NBPF10Q6P3W6 841 aaKnown RBP3.84□□□□□ -1.79
C4BPA-203ENST00000424088 TAS1R3Q7RTX0 852 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 TRIM22Q8IYM9 498 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 NBPF15Q8N660 670 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 XAGE2Q96GT9 111 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 GAS2L1Q99501 681 aaPredicted RBP3.84□□□□□ -1.79
C4BPA-203ENST00000424088 TIMMDC1Q9NPL8 285 aa3.84□□□□□ -1.79
C4BPA-203ENST00000424088 SPATA31C2B4DYI2 1134 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 RAD21O60216 631 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 F11P03951 625 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 MCM6Q14566 821 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 OXLD1Q5BKU9 147 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 RNFT1Q5M7Z0 435 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 TMEM214Q6NUQ4 689 aaKnown RBP3.83□□□□□ -1.8
C4BPA-203ENST00000424088 TRERF1Q96PN7 1200 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 ZSCAN10Q96SZ4 725 aaPredicted RBP3.83□□□□□ -1.8
C4BPA-203ENST00000424088 RAB6BQ9NRW1 208 aa3.83□□□□□ -1.8
C4BPA-203ENST00000424088 CUEDC1Q9NWM3 386 aaPredicted RBP3.83□□□□□ -1.8
C4BPA-203ENST00000424088 WASLO00401 505 aaPredicted RBP3.82□□□□□ -1.8
C4BPA-203ENST00000424088 IL2RAP01589 272 aa3.82□□□□□ -1.8
C4BPA-203ENST00000424088 SLURP2P0DP57 97 aa3.82□□□□□ -1.8
C4BPA-203ENST00000424088 SRSF11Q05519 484 aaKnown RBP3.82□□□□□ -1.8
C4BPA-203ENST00000424088 FLIIQ13045 1269 aa3.82□□□□□ -1.8
C4BPA-203ENST00000424088 GNASQ5JWF2 1037 aa3.82□□□□□ -1.8
C4BPA-203ENST00000424088 SVOPQ8N4V2 548 aa3.82□□□□□ -1.8
C4BPA-203ENST00000424088 CHIC2Q9UKJ5 165 aa3.82□□□□□ -1.8
C4BPA-203ENST00000424088 COG6Q9Y2V7 657 aa3.82□□□□□ -1.8
C4BPA-203ENST00000424088 CSB-PGBD3P0DP91 1061 aa3.81□□□□□ -1.8
C4BPA-203ENST00000424088 PHKA2P46019 1235 aa3.81□□□□□ -1.8
C4BPA-203ENST00000424088 PGBD3Q8N328 593 aa3.81□□□□□ -1.8
C4BPA-203ENST00000424088 PLPP7Q8NBV4 271 aa3.81□□□□□ -1.8
C4BPA-203ENST00000424088 GTPBP3Q969Y2 492 aaKnown RBP3.81□□□□□ -1.8
C4BPA-203ENST00000424088 ZNF837Q96EG3 531 aaPredicted RBP3.81□□□□□ -1.8
C4BPA-203ENST00000424088 ADAMTS8Q9UP79 889 aa3.81□□□□□ -1.8
C4BPA-203ENST00000424088 A0A1B0GTH6 734 aa3.8□□□□□ -1.8
C4BPA-203ENST00000424088 GPR25O00155 361 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms